Featured Researches

Computational Physics

A Suite of Reduced-Order Models of a Single-Layer Lithium-ion Pouch Cell

For many practical applications, fully coupled three-dimensional models describing the behaviour of lithium-ion pouch cells are too computationally expensive. However, owing to the small aspect ratio of typical pouch cell designs, such models are well approximated by splitting the problem into a model for through-cell behaviour and a model for the transverse behaviour. In this paper, we combine different simplifications to through-cell and transverse models to develop a hierarchy of reduced-order pouch cell models. We give a critical numerical comparison of each of these models in both isothermal and thermal settings, and also study their performance on realistic drive cycle data. Finally, we make recommendations regarding model selection, taking into account the available computational resource and the quantities of interest in a particular study.

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Computational Physics

A Supervised Machine Learning Approach for Accelerating the Design of Particulate Composites: Application to Thermal Conductivity

A supervised machine learning (ML) based computational methodology for the design of particulate multifunctional composite materials with desired thermal conductivity (TC) is presented. The design variables are physical descriptors of the material microstructure that directly link microstructure to the material's properties. A sufficiently large and uniformly sampled database was generated based on the Sobol sequence. Microstructures were realized using an efficient dense packing algorithm, and the TCs were obtained using our previously developed Fast Fourier Transform (FFT) homogenization method. Our optimized ML method is trained over the generated database and establishes the complex relationship between the structure and properties. Finally, the application of the trained ML model in the inverse design of a new class of composite materials, liquid metal (LM) elastomer, with desired TC is discussed. The results show that the surrogate model is accurate in predicting the microstructure behavior with respect to high-fidelity FFT simulations, and inverse design is robust in finding microstructure parameters according to case studies.

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Computational Physics

A Taylor Based Sampling Scheme for Machine Learning in Computational Physics

Machine Learning (ML) is increasingly used to construct surrogate models for physical simulations. We take advantage of the ability to generate data using numerical simulations programs to train ML models better and achieve accuracy gain with no performance cost. We elaborate a new data sampling scheme based on Taylor approximation to reduce the error of a Deep Neural Network (DNN) when learning the solution of an ordinary differential equations (ODE) system.

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Computational Physics

A Truncation Error Analysis of Third-Order MUSCL Scheme for Nonlinear Conservation Laws

This paper is a rebuttal to the claim found in the literature that the MUSCL scheme cannot be third-order accurate for nonlinear conservation laws. We provide a rigorous proof for third-order accuracy of the MUSCL scheme based on a careful and detailed truncation error analysis. Throughout the analysis, the distinction between the cell average and the point value will be strictly made for the numerical solution as well as for the target operator. It is shown that the average of the solutions reconstructed at a face by Van Leer's kappa-scheme recovers a cubic solution exactly with kappa = 1/3, the same is true for the average of the nonlinear fluxes evaluated by the reconstructed solutions, and a dissipation term is already sufficiently small with a third-order truncation error. Finally, noting that the target spatial operator is a cell-averaged flux derivative, we prove that the leading truncation error of the MUSCL finite-volume scheme is third-order with kappa = 1/3. The importance of the diffusion scheme is also discussed: third-order accuracy will be lost when the third-order MUSLC scheme is used with a wrong fourth-order diffusion scheme for convection-diffusion problems. Third-order accuracy is verified by thorough numerical experiments for both steady and unsteady problems. This paper is intended to serve as a reference to clarify confusions about third-order accuracy of the MUSCL scheme, as a guide to correctly analyze and verify the MUSCL scheme for nonlinear equations, and eventually as the basis for clarifying third-order unstructured-grid schemes in a subsequent paper.

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Computational Physics

A Unified Approach to Enhanced Sampling

The sampling problem lies at the heart of atomistic simulations and over the years many different enhanced sampling methods have been suggested towards its solution. These methods are often grouped into two broad families. On the one hand methods such as umbrella sampling and metadynamics that build a bias potential based on few order parameters or collective variables. On the other hand, tempering methods such as replica exchange that combine different thermodynamic ensembles in one single expanded ensemble. We instead adopt a unifying perspective, focusing on the target probability distribution sampled by the different methods. This allows us to introduce a new class of collective-variables-based bias potentials that can be used to sample any of the expanded ensembles normally sampled via replica exchange. We also provide a practical implementation, by properly adapting the iterative scheme of the recently developed on-the-fly probability enhanced sampling method [Invernizzi and Parrinello, J. Phys. Chem. Lett. 11.7 (2020)], which was originally introduced for metadynamics-like sampling. The resulting method is very general and can be used to achieve different types of enhanced sampling. It is also reliable and simple to use, since it presents only few and robust external parameters and has a straightforward reweighting scheme. Furthermore, it can be used with any number of parallel replicas. We show the versatility of our approach with applications to multicanonical and multithermal-multibaric simulations, thermodynamic integration, umbrella sampling, and combinations thereof.

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Computational Physics

A Vlasov Algorithm Derived from Phase Space Conservation

Existing approaches to solving the Vlasov equation treat the system as a partial differential equation on a phase space grid, and track in either an Eulerian, Lagrangian, or semi-Lagrangian picture. We present an alternative approach, which treats the Vlasov equation as a conservative flow on phase space, and derives its equations of motion using particle-pushing algorithms akin to particle-in-cell methods. Deposition to the grid is determined from the convolution of local basis functions. This approach has the benefit of allowing flexible definitions in the grid, which are decoupled from how the phase space flow evolves. We present numerical examples and comment on the various properties of the algorithm.

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Computational Physics

A community-powered search of machine learning strategy space to find NMR property prediction models

The rise of machine learning (ML) has created an explosion in the potential strategies for using data to make scientific predictions. For physical scientists wishing to apply ML strategies to a particular domain, it can be difficult to assess in advance what strategy to adopt within a vast space of possibilities. Here we outline the results of an online community-powered effort to swarm search the space of ML strategies and develop algorithms for predicting atomic-pairwise nuclear magnetic resonance (NMR) properties in molecules. Using an open-source dataset, we worked with Kaggle to design and host a 3-month competition which received 47,800 ML model predictions from 2,700 teams in 84 countries. Within 3 weeks, the Kaggle community produced models with comparable accuracy to our best previously published "in-house" efforts. A meta-ensemble model constructed as a linear combination of the top predictions has a prediction accuracy which exceeds that of any individual model, 7-19x better than our previous state-of-the-art. The results highlight the potential of transformer architectures for predicting quantum mechanical (QM) molecular properties.

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Computational Physics

A compute-bound formulation of Galerkin model reduction for linear time-invariant dynamical systems

This work aims to advance computational methods for projection-based reduced order models (ROMs) of linear time-invariant (LTI) dynamical systems. For such systems, current practice relies on ROM formulations expressing the state as a rank-1 tensor (i.e., a vector), leading to computational kernels that are memory bandwidth bound and, therefore, ill-suited for scalable performance on modern many-core and hybrid computing nodes. This weakness can be particularly limiting when tackling many-query studies, where one needs to run a large number of simulations. This work introduces a reformulation, called rank-2 Galerkin, of the Galerkin ROM for LTI dynamical systems which converts the nature of the ROM problem from memory bandwidth to compute bound. We present the details of the formulation and its implementation, and demonstrate its utility through numerical experiments using, as a test case, the simulation of elastic seismic shear waves in an axisymmetric domain. We quantify and analyze performance and scaling results for varying numbers of threads and problem sizes. Finally, we present an end-to-end demonstration of using the rank-2 Galerkin ROM for a Monte Carlo sampling study. We show that the rank-2 Galerkin ROM is one order of magnitude more efficient than the rank-1 Galerkin ROM (the current practice) and about 970X more efficient than the full order model, while maintaining accuracy in both the mean and statistics of the field.

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Computational Physics

A consistent and conservative Phase-Field model for thermo-gas-liquid-solid flows including liquid-solid phase change

In the present study, a consistent and conservative Phase-Field model is developed to study thermo-gas-liquid-solid flows with liquid-solid phase change. The proposed model is derived with the help of the consistency conditions and exactly reduces to the consistent and conservative Phase-Field method for incompressible two-phase flows, the fictitious domain Brinkman penalization (FD/BP) method for fluid-structure interactions, and the Phase-Field model of solidification of pure material. It honors the mass conservation, defines the volume fractions of individual phases unambiguously, and therefore captures the volume change due to phase change. The momentum is conserved when the solid phase is absent, but it changes when the solid phase appears due to the no-slip condition at the solid boundary. The proposed model also conserves the energy, preserves the temperature equilibrium, and is Galilean invariant. A novel continuous surface tension force to confine its contribution at the gas-liquid interface and a drag force modified from the Carman-Kozeny equation to reduce solid velocity to zero are proposed. The issue of initiating phase change in the original Phase-Field model of solidification is addressed by physically modifying the interpolation function. The corresponding consistent scheme is developed to solve the model, and the numerical results agree well with the analytical solutions and the existing experimental and numerical data. Two challenging problems having a wide range of material properties and complex dynamics are conducted to demonstrate the capability of the proposed model.

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Computational Physics

A consistent and conservative model and its scheme for N -phase- M -component incompressible flows

In the present work, we propose a consistent and conservative model for multiphase and multicomponent incompressible flows, where there can be arbitrary numbers of phases and components. Each phase has a background fluid called the pure phase, each pair of phases is immiscible, and components are dissolvable in some specific phases. The model is developed based on the multiphase Phase-Field model including the contact angle boundary condition, the diffuse domain approach, and the analyses on the proposed consistency conditions for multiphase and multicomponent flows. The model conserves the mass of individual pure phases, the amount of each component in its dissolvable region, and thus the mass of the fluid mixture, and the momentum of the flow. It ensures that no fictitious phases or components can be generated and that the summation of the volume fractions from the Phase-Field model is unity everywhere so that there is no local void or overfilling. It satisfies a physical energy law and it is Galilean invariant. A corresponding numerical scheme is developed for the proposed model, whose formal accuracy is 2nd-order in both time and space. It is shown to be consistent and conservative and its solution is demonstrated to preserve the Galilean invariance and energy law. Numerical tests indicate that the proposed model and scheme are effective and robust to study various challenging multiphase and multicomponent flows.

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