Electrical Engineering And Systems Science

In this paper we present a new approach for pupil segmentation. It can be computed and trained very efficiently, making it ideal for online use for high speed eye trackers as well as for energy saving pupil detection in mobile eye tracking. The approach is inspired by the BORE and CBF algorithms and generalizes the binary comparison by Haar features. Since these features are intrinsically very susceptible to noise and fluctuating light conditions, we combine them with conditional pupil shape probabilities. In addition, we also rank each feature according to its importance in determining the pupil shape. Another advantage of our method is the use of statistical learning, which is very efficient and can even be used online. this https URL

In the field of multimodal segmentation, the correlation between different modalities can be considered for improving the segmentation results. In this paper, we propose a multi-modality segmentation network with a correlation constraint. Our network includes N model-independent encoding paths with N image sources, a correlation constraint block, a feature fusion block, and a decoding path. The model independent encoding path can capture modality-specific features from the N modalities. Since there exists a strong correlation between different modalities, we first propose a linear correlation block to learn the correlation between modalities, then a loss function is used to guide the network to learn the correlated features based on the linear correlation block. This block forces the network to learn the latent correlated features which are more relevant for segmentation. Considering that not all the features extracted from the encoders are useful for segmentation, we propose to use dual attention based fusion block to recalibrate the features along the modality and spatial paths, which can suppress less informative features and emphasize the useful ones. The fused feature representation is finally projected by the decoder to obtain the segmentation result. Our experiment results tested on BraTS-2018 dataset for brain tumor segmentation demonstrate the effectiveness of our proposed method.

Segmentation of pulmonary infiltrates can help assess severity of COVID-19, but manual segmentation is labor and time-intensive. Using neural networks to segment pulmonary infiltrates would enable automation of this task. However, training a 3D U-Net from computed tomography (CT) data is time- and resource-intensive. In this work, we therefore developed and tested a solution on how transfer learning can be used to train state-of-the-art segmentation models on limited hardware and in shorter time. We use the recently published RSNA International COVID-19 Open Radiology Database (RICORD) to train a fully three-dimensional U-Net architecture using an 18-layer 3D ResNet, pretrained on the Kinetics-400 dataset as encoder. The generalization of the model was then tested on two openly available datasets of patients with COVID-19, who received chest CTs (Corona Cases and MosMed datasets). Our model performed comparable to previously published 3D U-Net architectures, achieving a mean Dice score of 0.679 on the tuning dataset, 0.648 on the Coronacases dataset and 0.405 on the MosMed dataset. Notably, these results were achieved with shorter training time on a single GPU with less memory available than the GPUs used in previous studies.

Optical Coherence Tomography Angiography (OCTA) has been increasingly used in the management of eye and systemic diseases in recent years. Manual or automatic analysis of blood vessel in 2D OCTA images (en face angiograms) is commonly used in clinical practice, however it may lose rich 3D spatial distribution information of blood vessels or capillaries that are useful for clinical decision-making. In this paper, we introduce a novel 3D vessel reconstruction framework based on the estimation of vessel depth maps from OCTA images. First, we design a network with structural constraints to predict the depth of blood vessels in OCTA images. In order to promote the accuracy of the predicted depth map at both the overall structure- and pixel- level, we combine MSE and SSIM loss as the training loss function. Finally, the 3D vessel reconstruction is achieved by utilizing the estimated depth map and 2D vessel segmentation results. Experimental results demonstrate that our method is effective in the depth prediction and 3D vessel reconstruction for OCTA images.% results may be used to guide subsequent vascular analysis

Convolutional Neural Network (CNN)-based filters have achieved significant performance in video artifacts reduction. However, the high complexity of existing methods makes it difficult to be applied in real usage. In this paper, a CNN-based low complexity filter is proposed. We utilize depth separable convolution (DSC) merged with the batch normalization (BN) as the backbone of our proposed CNN-based network. Besides, a weight initialization method is proposed to enhance the training performance. To solve the well known over smoothing problem for the inter frames, a frame-level residual mapping (RM) is presented. We analyze some of the mainstream methods like frame-level and block-level based filters quantitatively and build our CNN-based filter with frame-level control to avoid the extra complexity and artificial boundaries caused by block-level control. In addition, a novel module called RM is designed to restore the distortion from the learned residuals. As a result, we can effectively improve the generalization ability of the learning-based filter and reach an adaptive filtering effect. Moreover, this module is flexible and can be combined with other learning-based filters. The experimental results show that our proposed method achieves significant BD-rate reduction than H.265/HEVC. It achieves about 1.2% BD-rate reduction and 79.1% decrease in FLOPs than VR-CNN. Finally, the measurement on H.266/VVC and ablation studies are also conducted to ensure the effectiveness of the proposed method.

Malaria microscopy, microscopic examination of stained blood slides to detect parasite Plasmodium, is considered to be a gold-standard for detecting life-threatening disease malaria. Detecting the plasmodium parasite requires a skilled examiner and may take up to 10 to 15 minutes to completely go through the whole slide. Due to a lack of skilled medical professionals in the underdeveloped or resource deficient regions, many cases go misdiagnosed; resulting in unavoidable complications and/or undue medication. We propose to complement the medical professionals by creating a deep learning-based method to automatically detect (localize) the plasmodium parasites in the photograph of stained film. To handle the unbalanced nature of the dataset, we adopt a two-stage approach. Where the first stage is trained to detect blood cells and classify them into just healthy or infected. The second stage is trained to classify each detected cell further into the life-cycle stage. To facilitate the research in machine learning-based malaria microscopy, we introduce a new large scale microscopic image malaria dataset. Thirty-eight thousand cells are tagged from the 345 microscopic images of different Giemsa-stained slides of blood samples. Extensive experimentation is performed using different CNN backbones including VGG, DenseNet, and ResNet on this dataset. Our experiments and analysis reveal that the two-stage approach works better than the one-stage approach for malaria detection. To ensure the usability of our approach, we have also developed a mobile app that will be used by local hospitals for investigation and educational purposes. The dataset, its annotations, and implementation codes will be released upon publication of the paper.

Automated construction of surface geometries of cardiac structures from volumetric medical images is important for a number of clinical applications. While deep-learning based approaches have demonstrated promising reconstruction precision, these approaches have mostly focused on voxel-wise segmentation followed by surface reconstruction and post-processing techniques. However, such approaches suffer from a number of limitations including disconnected regions or incorrect surface topology due to erroneous segmentation and stair-case artifacts due to limited segmentation resolution. We propose a novel deep-learning-based approach that directly predicts whole heart surface meshes from volumetric CT and MR image data. Our approach leverages a graph convolutional neural network to predict deformation on mesh vertices from a pre-defined mesh template to reconstruct multiple anatomical structures in a 3D image volume. Our method demonstrated promising performance of generating high-resolution and high-quality whole heart reconstructions and outperformed prior deep-learning based methods on both CT and MR data in terms of precision and surface quality. Furthermore, our method can more efficiently produce temporally-consistent and feature-corresponding surface mesh predictions for heart motion from CT or MR cine sequences, and therefore can potentially be applied for efficiently constructing 4D whole heart dynamics.

Image-to-image translation based on generative adversarial network (GAN) has achieved state-of-the-art performance in various image restoration applications. Single image dehazing is a typical example, which aims to obtain the haze-free image of a haze one. This paper concentrates on the challenging task of single image dehazing. Based on the atmospheric scattering model, we design a novel model to directly generate the haze-free image. The main challenge of image dehazing is that the atmospheric scattering model has two parameters, i.e., transmission map and atmospheric light. When we estimate them respectively, the errors will be accumulated to compromise dehazing quality. Considering this reason and various image sizes, we propose a novel input-size flexibility conditional generative adversarial network (cGAN) for single image dehazing, which is input-size flexibility at both training and test stages for image-to-image translation with cGAN framework. We propose a simple and effective U-type residual network (UR-Net) to combine the generator and adopt the spatial pyramid pooling (SPP) to design the discriminator. Moreover, the model is trained with multi-loss function, in which the consistency loss is a novel designed loss in this paper. We finally build a multi-scale cGAN fusion model to realize state-of-the-art single image dehazing performance. The proposed models receive a haze image as input and directly output a haze-free one. Experimental results demonstrate the effectiveness and efficiency of the proposed models.

This paper presents a generative model method for multispectral image fusion in remote sensing which is trained without supervision. This method eases the supervision of learning and it also considers a multi-objective loss function to achieve image fusion. The loss function incorporates both spectral and spatial distortions. Two discriminators are designed to minimize the spectral and spatial distortions of the generative output. Extensive experimentations are conducted using three public domain datasets. The comparison results across four reduced-resolution and three full-resolution objective metrics show the superiority of the developed method over several recently developed methods.

Traditionally, the main focus of image super-resolution techniques is on recovering the most likely high-quality images from low-quality images, using a one-to-one low- to high-resolution mapping. Proceeding that way, we ignore the fact that there are generally many valid versions of high-resolution images that map to a given low-resolution image. We are tackling in this work the problem of obtaining different high-resolution versions from the same low-resolution image using Generative Adversarial Models. Our learning approach makes use of high frequencies available in the training high-resolution images for preserving and exploring in an unsupervised manner the structural information available within these images. Experimental results on the CelebA dataset confirm the effectiveness of the proposed method, which allows the generation of both realistic and diverse high-resolution images from low-resolution images.