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Dive into the research topics where A.G. de Boer is active.

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Featured researches published by A.G. de Boer.


Applied and Environmental Microbiology | 2007

Bacteriophage Therapy To Reduce Salmonella Colonization of Broiler Chickens

Robert J. Atterbury; M.A.P. van Bergen; F. Ortiz; Margaret A. Lovell; Jillian Anne Harris; A.G. de Boer; Jaap A. Wagenaar; Vivien Allen; Paul A. Barrow

ABSTRACT Acute enteric infections caused by salmonellas remain a major public health burden worldwide. Poultry, particularly chickens, are known to be the main reservoir for this zoonotic pathogen. Although some progress has been made in reducing Salmonella colonization of broiler chickens by using biosecurity and antimicrobials, it still remains a considerable problem. The use of host-specific bacteriophages as a biocontrol is one possible intervention by which Salmonella colonization could be reduced. A total of 232 Salmonella bacteriophages were isolated from poultry farms, abattoirs, and wastewater in 2004 and 2005. Three phages exhibiting the broadest host ranges against Salmonella enterica serotypes Enteritidis, Hadar, and Typhimurium were characterized further by determining their morphology and lytic activity in vitro. These phages were then administered in antacid suspension to birds experimentally colonized with specific Salmonella host strains. The first phage reduced S. enterica serotype Enteritidis cecal colonization by ≥4.2 log10 CFU within 24 h compared with controls. Administration of the second phage reduced S. enterica serotype Typhimurium by ≥2.19 log10 CFU within 24 h. The third bacteriophage was ineffective at reducing S. enterica serotype Hadar colonization. Bacteriophage resistance occurred at a frequency commensurate with the titer of phage being administered, with larger phage titers resulting in a greater proportion of resistant salmonellas. The selection of appropriate bacteriophages and optimization of both the timing and method of phage delivery are key factors in the successful phage-mediated control of salmonellas in broiler chickens.


European Journal of Clinical Microbiology & Infectious Diseases | 2013

A novel link between Campylobacter jejuni bacteriophage defence, virulence and Guillain-Barré syndrome

Rogier Louwen; Deborah Horst-Kreft; A.G. de Boer; L. van der Graaf; G.J. De Knegt; M. Hamersma; Astrid P. Heikema; A. R. Timms; Bart C. Jacobs; Jaap A. Wagenaar; Hubert P. Endtz; J. van der Oost; Jerry M. Wells; E. E. S. Nieuwenhuis; A. H. M. van Vliet; Peter Willemsen; P. van Baarlen; A. van Belkum

Guillain–Barré syndrome (GBS) is a post-infectious disease in which the human peripheral nervous system is affected after infection by specific pathogenic bacteria, including Campylobacter jejuni. GBS is suggested to be provoked by molecular mimicry between sialylated lipooligosaccharide (LOS) structures on the cell envelope of these bacteria and ganglioside epitopes on the human peripheral nerves, resulting in autoimmune-driven nerve destruction. Earlier, the C. jejuni sialyltransferase (Cst-II) was found to be linked to GBS and demonstrated to be involved in the biosynthesis of the ganglioside-like LOS structures. Apart from a role in pathogenicity, we report here that Cst-II-generated ganglioside-like LOS structures confer efficient bacteriophage resistance in C. jejuni. By bioinformatic analysis, it is revealed that the presence of sialyltransferases in C. jejuni and other potential GBS-related pathogens correlated significantly with the apparent degeneration of an alternative anti-virus system: type II Clusters of Regularly Interspaced Short Palindromic Repeat and associated genes (CRISPR-Cas). Molecular analysis of the C. jejuni CRISPR-Cas system confirmed the bioinformatic investigation. CRISPR degeneration and mutations in the cas genes cas2, cas1 and csn1 were found to correlate with Cst-II sialyltransferase presence (p < 0.0001). Remarkably, type II CRISPR-Cas systems are mainly found in mammalian pathogens. To study the potential involvement of this system in pathogenicity, we inactivated the type II CRISPR-Cas marker gene csn1, which effectively reduced virulence in primarily cst-II-positive C. jejuni isolates. Our findings indicate a novel link between viral defence, virulence and GBS in a pathogenic bacterium.


Medical and Veterinary Entomology | 2008

Accidental importation of the mosquito Aedes albopictus into the Netherlands: a survey of mosquito distribution and the presence of dengue virus

E. Dijkstra; H. Blok; A. de Vries; Willem Takken; A. Hofhuis; M.P.G. Koopmans; A.G. de Boer; C. Reusken

Abstract In the summer of 2005, the Asian tiger mosquito, Aedes albopictus (Skuse) (Diptera: Culicidae) was found for the first time in the Netherlands. It was collected on the premises of several horticultural companies that import the ornamental plant Dracaena sanderiana (Sparagalus: Dracaenaceae [Agavaceae]), known as Lucky bamboo, from southern China, an area endemic for this mosquito species and for arboviruses transmitted by this vector. Here we report the results of a 1‐year survey of the distribution and vector status of Ae. albopictus in Lucky bamboo nurseries in the Netherlands (July 2006–June 2007). As it had been established previously that the presence of this species was linked to the import of Lucky bamboo, the survey was conducted only on sites owned by relevant import companies. In total, 569 adult Ae. albopictus were collected with mosquito traps from 15 of the 17 (88%) glasshouses used by Lucky bamboo importers, none of which were found to be infected with dengue virus. On two occasions there was evidence that Ae. albopictus had escaped from the glasshouses, but, overall, there was no evidence that a population had become established in the greenhouses or elsewhere.


Journal of Clinical Microbiology | 2012

Genetic Features Differentiating Bovine, Food, and Human Isolates of Shiga Toxin-Producing Escherichia coli O157 in The Netherlands

Eelco Franz; A.H.A.M. van Hoek; F.J. van der Wal; A.G. de Boer; A. Zwartkruis-Nahuis; K. van der Zwaluw; H.J.M. Aarts; A.E. Heuvelink

ABSTRACT The frequency of Escherichia coli O157 genotypes among bovine, food, and human clinical isolates from The Netherlands was studied. Genotyping included the lineage-specific polymorphism assay (LSPA6), the Shiga-toxin-encoding bacteriophage insertion site assay (SBI), and PCR detection and/or subtyping of virulence factors and markers [stx1, stx 2a/stx 2c, q21/Q933, tir(A255T), and rhsA(C3468G)]. LSPA6 lineage II dominated among bovine isolates (63%), followed by lineage I/II (35.6%) and lineage I (1.4%). In contrast, the majority of the human isolates were typed as lineage I/II (77.6%), followed by lineage I (14.1%) and lineage II (8.2%). Multivariate analysis revealed that the tir(A255T) SNP and the stx2a/stx 2c gene variants were the genetic features most differentiating human from bovine isolates. Bovine and food isolates were dominated by stx 2c (86.4% and 65.5%, respectively). Among human isolates, the frequency of stx 2c was 36.5%, while the frequencies of stx 2a and stx 2a plus stx 2c were 41.2% and 22.4%, respectively. Bovine isolates showed equal distribution of tir(255A) (54.8%) and tir(255T) (45.2%), while human isolates were dominated by the tir(255T) genotype (92.9%). LSPA6 lineage I isolates were all genotype stx 2c and tir(255T), while LSPA6 lineage II was dominated by tir(255A) (86.4%) and stx 2c (90.9%). LSPA6 lineage I/II isolates were all genotype tir(255T) but showed more variation in stx 2 types. The results support the hypothesis that in The Netherlands, the genotypes primarily associated with human disease form a minor subpopulation in the bovine reservoir. Comparison with published data revealed that the distribution of LSPA6 lineages among bovine and human clinical isolates differs considerably between The Netherlands and North America.


Epidemiology and Infection | 2014

Campylobacteriosis in returning travellers and potential secondary transmission of exotic strains.

Lapo Mughini-Gras; J. H. Smid; Jaap A. Wagenaar; A.G. de Boer; Arie H. Havelaar; I. H. M. Friesema; N. P. French; C. Graziani; Luca Busani; W van Pelt

SUMMARY Multilocus sequence types (STs) were determined for 232 and 737 Campylobacter jejuni/coli isolates from Dutch travellers and domestically acquired cases, respectively. Putative risk factors for travel-related campylobacteriosis, and for domestically acquired campylobacteriosis caused by exotic STs (putatively carried by returning travellers), were investigated. Travelling to Asia, Africa, Latin America and the Caribbean, and Southern Europe significantly increased the risk of acquiring campylobacteriosis compared to travelling within Western Europe. Besides eating chicken, using antacids, and having chronic enteropathies, we identified eating vegetable salad outside Europe, drinking bottled water in high-risk destinations, and handling/eating undercooked pork as possible risk factors for travel-related campylobacteriosis. Factors associated with domestically acquired campylobacteriosis caused by exotic STs involved predominantly person-to-person contacts around popular holiday periods. We concluded that putative determinants of travel-related campylobacteriosis differ from those of domestically acquired infections and that returning travellers may carry several exotic strains that might subsequently spread to domestic populations even through limited person-to-person transmission.


Journal of Microbiological Methods | 2013

Evaluation of molecular assays for identification Campylobacter fetus species and subspecies and development of a C. fetus specific real-time PCR assay

L. van Bloois; M.A.P. van Bergen; F.J. van der Wal; A.G. de Boer; Birgitta Duim; T. Schmidt; Jaap A. Wagenaar

Phenotypic differentiation between Campylobacter fetus (C. fetus) subspecies fetus and C. fetus subspecies venerealis is hampered by poor reliability and reproducibility of biochemical assays. AFLP (amplified fragment length polymorphism) and MLST (multilocus sequence typing) are the molecular standards for C. fetus subspecies identification, but these methods are laborious and expensive. Several PCR assays for C. fetus subspecies identification have been described, but a reliable comparison of these assays is lacking. The aim of this study was to evaluate the most practical and routinely implementable published PCR assays designed for C. fetus species and subspecies identification. The sensitivity and specificity of the assays were calculated by using an extensively characterized and diverse collection of C. fetus strains. AFLP and MLST identification were used as reference. Two PCR assays were able to identify C. fetus strains correctly at species level. The C. fetus species identification target, gene nahE, of one PCR assay was used to develop a real-time PCR assay with 100% sensitivity and 100% specificity, but the development of a subspecies venerealis specific real-time PCR (ISCfe1) failed due to sequence variation of the target insertion sequence and prevalence in other Campylobacter species. None of the published PCR assays was able to identify C. fetus strains correctly at subspecies level. Molecular analysis by AFLP or MLST is still recommended to identify C. fetus isolates at subspecies level.


Journal of Applied Microbiology | 2010

Pathogenic potential and horizontal gene transfer in ovine gastrointestinal Escherichia coli

D. Döpfer; Camilla Sekse; Lothar Beutin; H. Solheim; F.J. van der Wal; A.G. de Boer; J.S. Slettemeås; Yngvild Wasteson; A.M. Urdahl

Aims:  To demonstrate that a thorough characterization and virulotyping of Escherichia coli strains isolated from sheep over time leads to new insights into ovine E. coli potentially becoming human pathogens through horizontal gene transfer.


Poultry Science | 2014

A SpoT polymorphism correlates with chill stress survival and is prevalent in clinical isolates of Campylobacter jejuni

M.N. Nierop Groot; A.G. de Boer; W. van Pelt; M. C. van der Hulst-van Arkel; P.P.L.A. de Leeuw; H.C.A. Widjaja; M.A. Smits; F.J. van der Wal

Resistance of Campylobacter jejuni to environmental stress is regarded as a risk factor for the transmission of C. jejuni from poultry or poultry products to humans. So far, the mechanisms underlying the capacity of C. jejuni to survive environmental stress conditions are not fully understood. In this study, we searched for polymorphisms in C. jejuni genes, potentially involved in resistance to chill stress. To this end, we assessed 3 groups of C. jejuni isolates (clinical, retail chicken meat, and feces) for survival of experimentally induced chill stress. For each isolate we sequenced 3 genes encoding the C. jejuni sigma factors FliA, RpoD, and RpoN as well as the genes for the transcriptional regulator SpoT and the periplasmic protein HtrA. Data suggest a higher prevalence of a specific polymorphism in spoT in clinical isolates compared with poultry meat or farm isolates. Moreover, this genotype correlated with enhanced survival of chill stress. The observation that the prevalence of this SNP is relatively high in clinical isolates, which most likely have been exposed to multiple forms of stress, suggest that this SNP may be a biomarker for enhanced survival of stress.


Analytical and Bioanalytical Chemistry | 2011

Carbon nanoparticles in lateral flow methods to detect genes encoding virulence factors of Shiga toxin-producing Escherichia coli

P. Noguera; G. A. Posthuma-Trumpie; M. van Tuil; F.J. van der Wal; A.G. de Boer; Antoine P. H. A. Moers; A. van Amerongen


European Journal of Clinical Microbiology & Infectious Diseases | 2014

Comparative population structure analysis of Campylobacter jejuni from human and poultry origin in Bangladesh

Zhahirul Islam; A. van Belkum; Jaap A. Wagenaar; Alison J. Cody; A.G. de Boer; S. K. Sarker; Bart C. Jacobs; Kaisar A. Talukder; Hubert P. Endtz

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F.J. van der Wal

Wageningen University and Research Centre

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M.A.P. van Bergen

Wageningen University and Research Centre

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Paul A. Barrow

University of Nottingham

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Bart C. Jacobs

Erasmus University Rotterdam

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Hubert P. Endtz

Erasmus University Rotterdam

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