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Biophysical Journal | 1982

Conformations of model peptides in membrane-mimetic environments.

Lila M. Gierasch; Jeffrey E. Lacy; Karyn F. Thompson; A. L. Rockwell; Paula I. Watnick

The influence of a membrane environment on the conformational energetics of a polypeptide chain has been investigated through studies of model peptides in a variety of membrane-mimetic media. Nuclear magnetic resonance (NMR) and circular dichroism (CD) data have been obtained for the peptides in bulk hydrophobic solvents, normal micelles, and reversed micelles. Several hydrophobic peptides which are sparingly soluble in water have been solubilized in aqueous sodium dodecyl sulfate (SDS) solution. NMR and CD data indicate that the micelle-solubilized peptides experience an environment with the conformational impact of bulk methanol, and have decreased conformational freedom. The site of residence of the peptides interacting with the micelles appears to be near the surfactant head groups, in a region permeated by water, and not in the micelle core. Strongly hydrophilic peptides have been solubilized in nonpolar solvents by reversed micelles. These peptides are located in small water pools in close association with the head groups of the surfactant. NMR and CD data show that there is a conformational impact of this interfacial water region on peptide solubilizates distinct from that of bulk water.


Archive | 1984

Exploring Peptide Interactions with Interfacial Water Using Reversed Micelles

Lila M. Gierasch; Karyn F. Thompson; Jeffrey E. Lacy; A. L. Rockwell

Water adjacent to biological membranes or macromolecules has properties distinct from bulk water. Many biological processes such as energy transduction or recognition events occur in this interfacial water region. It is critical to understanding these processes that the nature of interactions between polypeptide chains and the interfacial water be elucidated. Water within reversed micelles shows behavior very similar to this biochemically important interfacial water. The small water pools offer an excellent system for studying interfacial water, since there is no large pool of bulk water to obscure the parameters due to the interfacial water. We have been exploring the interactions of polypeptides with interfacial water by solubilizing synthetic model peptides in Aerosol OT (AOT, sodium bis-2-ethylhexyl-sulfosuccinate) reversed micelles and using nuclear magnetic resonance (NMR) and circular dichroism (CD) to analyze the conformations of the peptides. Our results indicate that the model peptides undergo a conformational change in the interfacial water that is induced by the counterions of the AOT headgroups. CD, 1H and 13c NMR parameters enable conformational monitoring of the peptide upon variation of the amount of water in the internal pools. Furthermore, the influence of the presence of the model peptide in the water pool on the state of the water has been explored using NMR and infrared (IR) spectroscopies. We have found evidence of the perturbation of an amount of water that can be qualitatively related to the nature and size of the surface of the solubilized peptide. These results show promise of using reversed micelles to study polypeptide hydration.


Journal of the American Chemical Society | 1996

Complementarity of Combinatorial Chemistry and Structure-Based Ligand Design: Application to the Discovery of Novel Inhibitors of Matrix Metalloproteinases

A. L. Rockwell; Mark Melden; Robert A. Copeland; Karl D. Hardman; and Carl P. Decicco; William F. DeGrado


Journal of the American Chemical Society | 1986

Compatibility of .beta.- and .gamma.-turn features with a peptide backbone modification: synthesis and conformational analysis of a model cyclic pseudopentapeptide

Arno F. Spatola; Mohmed K. Anwer; A. L. Rockwell; Lila M. Gierasch


Journal of Medicinal Chemistry | 1997

Discovery of an orally active series of isoxazoline glycoprotein IIb/IIIa antagonists

Chu-Biao Xue; John Wityak; Thais M. Sielecki; Donald J. P. Pinto; Douglas G. Batt; Gary A. Cain; Michael Sworin; A. L. Rockwell; John Roderick; Shuaige Wang; Michael J. Orwat; William E. Frietze; Lori L. Bostrom; Jie Liu; C. Anne Higley; F.Wayne Rankin; A. Ewa Tobin; George Emmett; George K. Lalka; Jean Y. Sze; Susan V. Di Meo; Shaker A. Mousa; Martin J. Thoolen; Adrienne L. Racanelli; Elizabeth A. Hausner; Thomas M. Reilly; William F. DeGrado; and Ruth R. Wexler; Richard E. Olson


Journal of the American Chemical Society | 1988

Crystal structure of cyclo(Gly1-L-Pro2-D-Phe3-L-Ala4-L-Pro5): a cyclic pentapeptide with a Gly-L-Pro .delta. turn

Adam N. Stroup; A. L. Rockwell; Arnold L. Rheingold; Lila M. Gierasch


Journal of the American Chemical Society | 1985

Crystal and solution structures of cyclo(Ala-Pro-Gly-D-Phe-Pro): a new type of cyclic pentapeptide which undergoes cis-trans isomerization of the Ala-pro bond

Lila M. Gierasch; Isabella L. Karle; A. L. Rockwell; Kemal Yenal


Biochemistry | 1986

Dynamics of a hydrophobic peptide in membrane bilayers by solid-state nuclear magnetic resonance.

L. M. Mueller; M. H. Frey; A. L. Rockwell; Lila M. Gierasch; Stanley J. Opella


Biopolymers | 1985

Conformation–function relationships in hydrophobic peptides: Interior turns and signal sequences†

Lila M. Gierasch; A. L. Rockwell; Karyn F. Thompson; Martha S. Briggs


Biopolymers | 1983

Conformational comparison of cyclic peptide and pseudopeptide structures with intramolecular hydrogen bonding

Arno F. Spatola; Lila M. Gierasch; A. L. Rockwell

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Lila M. Gierasch

University of Massachusetts Amherst

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Isabella L. Karle

United States Naval Research Laboratory

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Adam N. Stroup

University of Texas Southwestern Medical Center

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