A. Lo Giudice

Phylogenetic characterization of the heterotrophic bacterial communities inhabiting a marine recirculating aquaculture system.

Aims:  The aim of the present work was to characterize the heterotrophic bacterial community of a marine recirculating aquaculture system (RAS).

Lipolytic activity of Antarctic cold-adapted marine bacteria (Terra Nova Bay, Ross Sea)

Aims:  The aim of this study was to investigate the lipolytic activity of cold‐adapted Antarctic marine bacteria and, furthermore, the combined effect of some environmental factors on this enzymatic process.

Occurrence and characterization of psychrotolerant hydrocarbon-oxidizing bacteria from surface seawater along the Victoria Land coast (Antarctica)

A total of 253 hydrocarbon-oxidizing bacterial isolates were achieved from eight Antarctic surface seawater samples enriched on diesel oil at 4°C. Isolates were screened by amplified ribosomal DNA restriction analysis prior to 16S rRNA gene sequencing. Sequences were compared to those in available databases using the Basic Local Alignment Search Tool network service to determine their approximate phylogenetic affiliations. The majority of the isolates were affiliated to the Actinobacteria (75.9%) and the Gamma-Proteobacteria (22.9%). The Alpha- and Beta-Proteobacteria represented 0.8 and 0.4% of total isolates, respectively. The Actinobacteria were predominantly allocated to the genera Arthrobacter, Cryobacterium and Rhodococcus. The Gamma-Proteobacteria were mainly found to be related to the genus Pseudomonas. Conversely, the Alpha- and Beta-Proteobacterial isolates shared the highest degree of sequence identity with unclassified bacteria. Differences in the distribution of the detected phylotypes were observed among the analyzed samples. Isolates representing each phylotype were selected for further characterization, including phenotypic assays and screening for the growth ability in the presence of individual hydrocarburic substrates as the sole supplied carbon and energy source. Isolates possessed different patterns of substrate utilization. Aliphatic hydrocarbons supported the growth of a higher number of isolates than aromatics. Results confirm the ability of our Antarctic marine bacteria to utilize hydrocarbons at low temperature and therefore suggesting that isolates with different substrate specificities can act in nature as a consortium in the utilization of complex hydrocarburic mixtures.

Prokaryotic activities and abundance in pelagic areas of the Ionian Sea

The Ionian Sea represents a suitable basin for studying the biogeochemical processes mediated by microbial activities. Because of its characteristics as a crossing region between the western and eastern Mediterranean Sea, it is one of the sites most affected by changes in water mass composition and dynamics, caused by the Eastern Mediterranean Transient (EMT). To date, relatively few data exist on microbial activities in pelagic areas of the Ionian Sea. From 1998 to 2004, during different research cruises, prokaryotic parameters (abundance, extracellular enzyme activities leucine aminopeptidase, β-glucosidase, alkaline phosphatase, bacterial production and respiration) were measured together with culturable bacteria and the main physical, chemical and trophic parameters (temperature, salinity, nutrients, particulated organic matter). The aim of the study was to describe the spatial and temporal variability in microbial activities involved in the carbon and phosphorus cycles, in different layers. Results showed that organic matter transformation mediated by the microbial community displayed a significant increase in autumn, highlighting the occurrence of significant changes at meso- and bathypelagic depths. Unlike the dark ocean, bacterial growth efficiency in the Ionian Sea, which increased with depth, seemed to vary from being a source of carbon in the epipelagic layer to a sink in the meso- and bathypelagic layers. The mechanism of phosphatase regulation showed a weak inverse correlation between specific phosphatase and inorganic P in all seasons except autumn. It is worth mentioning that the reported results constitute, to the best of our knowledge, one of the available datasets giving information about microbial activities in the Ionian Sea.

Microbiological characterization of a semi-enclosed sub-Antarctic environment: the Straits of Magellan

Among sub-Antarctic ecosystems, the microbiology of the Straits of Magellan has been poorly documented due to the scarcity of observations. In this context, the spatial distribution of microbiological parameters, both in terms of abundance (total picoplankton and picophytoplankton, cultivable heterotrophic bacteria) and biochemical assays (adenosine triphosphate and lipolysaccharide estimations, as well as electron transport system activity), was investigated in the epipelagic layer along the Straits during late summer 1991 and early autumn 1995. The microbial dynamics showed significant variations along the Straits, with increasing values generally determined eastward both in 1991 and 1995. Microbiological results were additionally correlated with available data on the physico-chemical and biological properties of the analyzed water masses. Taking into consideration the whole dataset, the principal component analysis led to the identification of three main macro-areas along the Straits of Magellan (Paso Largo, Paso Ancho and Angostura/Isla Isabel) with different trophic features. This held true when the two cruises were individually considered, as well as when comparing each macro-area between the two cruises. Additionally, a first attempt to quantify the carbon flux through the microbial compartment within the main identified macro-areas was made. The present work will allow the gaining of further understanding of the microbiology of this under-investigated sub-Antarctic marine ecosystem.

97 Antarctic bacteria as producers of antibiotic volatile compounds inhibiting cystic fibrosis pathogens

96 Incidence of nephrotoxicity associated with concomitant colistimethate and vancomycin use in cystic fibrosis patients M. Adeola1, A. Coralic1, S. Hart1, T.L. Barto2, M. Katz2,3. 1The Methodist Hospital, Pharmacy, Houston, United States; 2Baylor College of Medicine, Division of Pulmonary, Critical Care, and Sleep Medicine, Houston, United States; 3Texas Children’s Hospital Pavilion for Women, Houston, United States

96 New potential antibiotic sources for Burkholderia cepacia

95 An audit of the investigation, antibiotic management and clinical outcome of pulmonary exacerbations in patients with cystic fibrosis M.N. Hurley1,2, A.H.A. Ariff3, A. Smyth1,2,4. 1University of Nottingham, Child Health, Nottingham, United Kingdom; 2Nottingham Respiratory Biomedical Research Unit, Nottingham, United Kingdom; 3University of Nottingham, Medical School, School of Clinical Sciences, Nottingham, United Kingdom; 4Trent Local Children’s Research Network, Nottingham, United Kingdom

Ecophysiological characterization of cultivable Antarctic psychrotolerant marine bacteria able to degrade hydrocarbons

The basic understanding of both the physiology and ecology of psychrotolerant Antarctic bacteria is a crucial step for the optimization of their biodegradative activity in cold environments. The detection of cold-adapted hydrocarbon-degrading bacteria in Antarctic seawaters is certainly of great interest for bioremediative purpose in oil polluted marine Antarctic systems, where the introduction of non native species is not allowed. This study focused on psychrotolerant marine bacteria inhabiting an Antarctic coastal area directly influenced by the human activity at the Italian Research Station (Terra Nova Bay). Fifty bacterial strains were isolated from hydrocarbon-degrading enrichment cultures obtained from seawater samples collected in the inlet Road Bay (Ross Sea). A preliminary Restriction Fragment Length Polymorphism (RFLP) analysis, carried out on 16S rDNA amplified via PCR using RSAI and AluI restriction enzymes, was applied to cluster the isolates according to the restriction profile they showed. One representative isolate per cluster was selected for further characterization; to elucidate their taxonomic position, conventional phenotypic and phylogenetic analyses were performed. Results led to the identification of the isolates as members of ten genera belonging to four phylogenetic groups: the alfa- and gamma-proteobacteria subdivisions, the gram-positive branch and the Cytophaga-Flexibacter-Bacteroides (CFB) phylum. Results indicate a high degree of biodiversity within the peculiar ecophysiological group of the hydrocarbon-degrading marine bacteria.