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Dive into the research topics where A. Nurten Akarsu is active.

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Featured researches published by A. Nurten Akarsu.


American Journal of Human Genetics | 1998

Sequence Analysis and Homology Modeling Suggest That Primary Congenital Glaucoma on 2p21 Results from Mutations Disrupting Either the Hinge Region or the Conserved Core Structures of Cytochrome P4501B1

Ivaylo Stoilov; A. Nurten Akarsu; Ihuoma Alozie; Anne H. Child; Magda Barsoum-Homsy; M. Erol Turaçli; Meral Or; Richard A. Lewis; Nusret Ozdemir; G Brice; S. Gulderen Aktan; Line Chevrette; Miguel Coca-Prados; Mansoor Sarfarazi

We recently reported three truncating mutations of the cytochrome P4501B1 gene (CYP1B1) in five families with primary congenital glaucoma (PCG) linked to the GLC3A locus on chromosome 2p21. This could be the first direct evidence supporting the hypothesis that members of the cytochrome P450 superfamily may control the processes of growth and differentiation. We present a comprehensive sequence analysis of the translated regions of the CYP1B1 gene in 22 PCG families and 100 randomly selected normal individuals. Sixteen mutations and six polymorphisms were identified, illustrating an extensive allelic heterogeneity. The positions affected by these changes were evaluated by building a three-dimensional homology model of the conserved C-terminal half of CYP1B1. These mutations may interfere with heme incorporation, by affecting the hinge region and/or the conserved core structures (CCS) that determine the proper folding and heme-binding ability of P450 molecules. In contrast, all polymorphic sites were poorly conserved and located outside the CCS. Northern hybridization analysis showed strong expression of CYP1B1 in the anterior uveal tract, which is involved in secretion of the aqueous humor and in regulation of outflow facility, processes that could contribute to the elevated intraocular pressure characteristic of PCG.


Nature Genetics | 2003

Heterozygous mutations of the kinesin KIF21A in congenital fibrosis of the extraocular muscles type 1 (CFEOM1).

Koki Yamada; Caroline Andrews; Wai Man Chan; Craig A. McKeown; Adriano Magli; Teresa de Berardinis; Anat Loewenstein; Moshe Lazar; Michael O'Keefe; Robert D. Letson; Arnold London; Mark S. Ruttum; Naomichi Matsumoto; Nakamichi Saito; Lisa Morris; Monte A. Del Monte; Roger H. Johnson; Eiichiro Uyama; Willem A. Houtman; Berendina De Vries; Thomas J. Carlow; Blaine L. Hart; Nicolas Krawiecki; John M. Shoffner; Marlene C. Vogel; James A. Katowitz; Scott M. Goldstein; Alex V. Levin; Emin Cumhur Sener; Banu T. Öztürk

Congenital fibrosis of the extraocular muscles type 1 (CFEOM1; OMIM #135700) is an autosomal dominant strabismus disorder associated with defects of the oculomotor nerve. We show that individuals with CFEOM1 harbor heterozygous missense mutations in a kinesin motor protein encoded by KIF21A. We identified six different mutations in 44 of 45 probands. The primary mutational hotspots are in the stalk domain, highlighting an important new role for KIF21A and its stalk in the formation of the oculomotor axis.


Progress in Neuro-psychopharmacology & Biological Psychiatry | 2004

Is vitamin D hypothesis for schizophrenia valid? Independent segregation of psychosis in a family with vitamin-D-dependent rickets type IIA.

Suzan Özer; Aylin Uluşahin; Semra Ulusoy; Hamza Okur; Turgay Coskun; Timur Tuncali; Ahmet Göğüş; A. Nurten Akarsu

The vitamin D hypothesis of schizophrenia is a recent concept bringing together old observations on environmental risk factors and new findings on the neurodevelopmental effects of vitamin D. Candidate genes related to the vitamin D endocrine system have not yet been fully explored for this purpose. The coexistence of vitamin-D-dependent-rickets type II with alopecia (VDDR IIA) and different forms of psychosis in the same inbred family has provided us with an opportunity to investigate the presumed relationship between vitamin D deficiency and psychosis. Psychiatric examination and molecular genetic studies were performed in this family overloaded with psychotic disorders and VDDR IIA. Forty members were evaluated in order to describe their phenotypic features. The family was tested for a linkage to the chromosome 12q12-q14 region where the vitamin D receptor (VDR) gene is located. Psychosis was the common phenotype in the 18 psychiatrically affected members. Pedigree analysis did not show a cosegregation of psychosis and rickets. Lod scores were not significant to prove a linkage between psychosis and VDR locus. The authors concluded that (1) the neurodevelopmental consequences of vitamin D deficiency do not play a causative role in psychotic disorders, (2) these two syndromes are inherited independently, and (3) vitamin D deficiency does not act as a risk factor in subjects susceptible to psychosis.


American Journal of Medical Genetics | 1996

Exclusion of primary congenital glaucoma (buphthalmos) from two candidate regions of chromosome arm 6p and chromosome 11

A. Nurten Akarsu; M. Erol Turaçli; S. Gulderen Aktan; Altaf Hossain; Magda Barsoum-Homsy; Line Chevrette; B. Sitki Sayli; Mansoor Sarfarazi

Primary congenital glaucoma (gene symbol: GLC3) is characterized by an improper development of the aqueous outflow system. The reduced outflow of fluid results in an increased intraocular pressure leading to buphthalmos, optic nerve damage, and eventual visual impairment. GLC3 is a heterogeneous condition with an estimated incidence of 1:2,500 in Middle Eastern and 1:10,000 in Western countries. In many families, GLC3 is an autosomal recessive trait with presentation of an earlier age-of-onset, high intraocular pressure, enlarged cloudy cornea, buphthalmos, and a more aggressive course. The pathogenesis of GLC3 remains elusive despite extensive histologic efforts to identify a single anatomic defect. Recent advances in positional mapping and cloning of human disorders provided an opportunity to identify chromosome locations of the GLC3 phenotype. Our laboratory is currently involved in the mapping of this condition by using a combination of candidate chromosome regions associated with the GLC3 phenotype and by a general positional mapping strategy. 16 refs., 3 tabs.


European Journal of Human Genetics | 2001

X-linked recessive inheritance of radial ray deficiencies in a family with four affected males.

Robert-Jan H. Galjaard; Naci Kostakoglu; Jeannette Jm Hoogeboom; Guido J. Breedveld; Herma C. van der Linde; Steven E. R. Hovius; Ben A. Oostra; Lodewijk A. Sandkuijl; A. Nurten Akarsu; Peter Heutink

Radial ray deficiencies are frequently associated with additional clinical anomalies and have a heterogeneous aetiology. X-linked forms are extremely rare. We report a family in which four male relatives show bilateral absence of the radius with presence of the thumbs and associated anomalies. The segregation of the phenotype is suggestive for X-linked recessive inheritance. This is confirmed by performing linkage analysis using 24 markers spanning the X chromosome in which a maximum lod score of 1.93 for DXS8067 and DXS1001 is obtained. We defined a critical region of maximal 16.2 cM on the X chromosome with haplotype analysis.


Human Molecular Genetics | 1996

A Second Locus ( GLC3B ) for Primary Congenital Glaucoma (Buphthalmos) Maps to the 1p36 Region

A. Nurten Akarsu; M. Erol Turaçli; S. Gulderen Aktan; Magda Barsoum-Homsy; Line Chevrette; B. Sitki Sayli; Mansoor Sarfarazi


Human Molecular Genetics | 1996

Genomic Structure of HOXD13 Gene: A Nine Polyalanine Duplication Causes Synpolydactyly in Two Unrelated Families

A. Nurten Akarsu; Ivaylo Stoilov; Engin Yilmaz; B. Sitki Sayli; Mansoor Sarfarazi


Investigative Ophthalmology & Visual Science | 2004

Identification of KIF21A mutations as a rare cause of congenital fibrosis of the extraocular muscles type 3 (CFEOM3)

Koki Yamada; Wai Man Chan; Caroline Andrews; Thomas M. Bosley; Emin Cumhur Sener; Johan Zwaan; Paul B. Mullaney; Banu T. Öztürk; A. Nurten Akarsu; Louise J. Sabol; Joseph L. Demer; Timothy J. Sullivan; Irene Gottlob; Peter Roggenkäemper; David A. Mackey; Clara E. de Uzcátegui; Nicolas Uzcategui; Bruria Ben-Zeev; Elias I. Traboulsi; Adriano Magli; Teresa de Berardinis; Vincenzo Gagliardi; Sudha Awasthi-Patney; Marlene C. Vogel; Joseph F. Rizzo; Elizabeth C. Engle


Archives of Ophthalmology | 2000

A Clinically Variant Fibrosis Syndrome in a Turkish Family Maps to the CFEOM1 Locus on Chromosome 12

Emin Cumhur Sener; Bjorn A Lee; Banu Turgut; A. Nurten Akarsu; Elizabeth C. Engle


Human Molecular Genetics | 1995

Localization of the syndactyly type II (synpolydactyly) locus to 2q31 region and identification of tight linkage to HOXD8 intragenic marker

Mansoor Sarfarazi; A. Nurten Akarsu; Bekir Sitki Sayli

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Mansoor Sarfarazi

University of Connecticut Health Center

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Line Chevrette

Université de Montréal

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Caroline Andrews

Howard Hughes Medical Institute

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