A.W.G. van der Wurff

Nematode interactions in nature : Models for sustainable control of nematode pests of crop plants?

van der Putten, W. H., Cook, R., Costa, S., Davies, K. G., Fargette, M., Freitas, H., Hol, W. H. G., Kerry, B. R., Maher, N., Mateille, T., Moens, M., de la Pena, E., Piskiewicz, A., Raeymaekers, A., Rodriguez-Echeverria, S., van der Wurff, A. W. G. (2006). Nematode interactions in nature: models for sustainable control of nematode pests of crop plants? Advances in Agronomy, 89, 227-260.

TYPE OF DISTURBANCE AND ECOLOGICAL HISTORY DETERMINE STRUCTURAL STABILITY

This study aims to reveal whether complexity, namely, community and trophic structure, of chronically stressed soil systems is at increased risk or remains stable when confronted with a subsequent disturbance. Therefore, we focused on a grassland with a history of four centuries of patchy contamination. Nematodes were used as model organisms because they are an abundant and trophically diverse group and representative of the soil food web and ecosystem complexity. In a field survey, a relationship between contaminants and community structures was established. Following, two groups of soil mesocosms from the field that differed in contamination level were exposed to different disturbance regimes, namely, to the contaminant zinc and a heat shock. The zinc treatment revealed that community structure is stable, irrespective of soil contamination levels. This implies that centuries of exposure to contamination led to adaptation of the soil nematode community irrespective of the patchy distribution of contaminants. In contrast, the heat shock had adverse effects on species richness in the highly contaminated soils only. The total nematode biomass was lower in the highly contaminated field samples; however, the biomass was not affected by zinc and heat treatments of the mesocosms. This means that density compensation occurred rapidly, i.e., tolerant species quickly replaced sensitive species. Our results support the hypothesis that the history of contamination and the type of disturbance determine the response of communities. Despite that ecosystems may be exposed for centuries to contamination and communities show adaptation, biodiversity in highly contaminated sites is at increased risk when exposed to a different disturbance regime. We discuss how the loss of higher trophic levels from the entire system, such as represented by carnivorous nematodes after the heat shock, accompanied by local biodiversity loss at highly contaminated sites, may result in detrimental effects on ecosystem functions.

Assessment of structure and function in metal polluted grasslands using Terrestrial Model Ecosystems.

Ecosystem effects of metal pollution in field situations are hard to predict, since metals occur often in mixtures and links between structural (organisms) and functional endpoints (ecosystem processes) are not always that clear. In grasslands, both structure and functioning was suspected to be affected by a mixture of copper, lead, and zinc. Therefore, the structural and functional variables were studied simultaneously using Terrestrial Model Ecosystems (TMEs). Comparing averages of low- and high-polluted soil, based on total metal concentrations, did not show differences in structural and functional variables. However, nematode community structure (Maturity Index) negatively correlated with metal concentrations. Next to that, multivariate statistics showed that enchytraeid, earthworm and, to lesser extent, nematode diversity decreased with increasing metal concentrations and a lower pH in the soil. Bacterial CFU and nematode biomass were positively related with decomposer activity and nitrate concentrations. Nitrate concentrations were negatively related to ammonium concentrations. Earthworm biomass, CO(2) production and plant yield were not related to metal concentrations. The most metal-sensitive endpoint was enchytraeid biomass. In all analyses, soil pH was a significant factor, indicating direct effects on organisms, or indicating indirect effects by influencing metal availability. In general, structural diversity seemed more positively related to functional endpoints than structural biomass. TMEs proved valuable tools to assess the structure and function in metal polluted field situations. The outcome feeds modeling effort and direct future research.

A strategy in searching for stress tolerance-correlated characteristics in nematodes while accounting for phylogenetic interdependence

Biological indicators are highly relevant for assessing the condition of a soil as they are integrative; they reflect the overall impact of physical, chemical and biological changes. Indigenous soil organisms are preferable to other test organisms because the diversity and condition of indigenous soil organisms reflect both acute and chronic effects of soil disturbances. Nematodes are ubiquitous, speciose, easily extractable and present in extremely high numbers. Given the ever increasing amount of sequence data, DNA barcode-based community analysis will soon be possible and a next step would be to define objective criteria for the ecological grouping of soil nematodes. Here, we present a framework to ascertain which traits are correlated with a tolerance to stress. For this, a field study on the effects of pH and copper on nematode communities was re-analysed. Changes in abundances of individual genera were correlated with a number of potentially stress tolerance-related characteristics. The generalised least squares (GLS) method was used to account for the phylogenetic dependence of the data. Only the relationship between the ability to enter a survival stage and tolerance to copper at pH 6.1 was found to be significant, but the quantity of missing data probably had a negative impact on the analyses. This study did, however, clearly demonstrate the importance of accounting for the effects of phylogenetic dependence in the data. When the phylogeny was taken into account, we observed an average change in P value of 0.196 (and in some cases as much as 0.6) for the correlations of possible stress-related characteristics and Cu or pH tolerance. This research constitutes a proof-of-principle for a transparent method to relate stress tolerance to (ecological) characteristics. The usefulness of this powerful method should become even clearer when substantially higher numbers of individuals are analysed (as facilitated by using DNA barcodes) and when missing data are filled in