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Featured researches published by A.Y.A. AlKindi.


Marine Pollution Bulletin | 2009

Bacterial flora and antibiotic resistance from eggs of green turtles Chelonia mydas: An indication of polluted effluents

Saif N. Al-Bahry; I.Y. Mahmoud; Abdulkader E. Elshafie; Asila Al-Harthy; Sabha Al-Ghafri; Issa Al-Amri; A.Y.A. AlKindi

Sea turtles migrate to various habitats where they can be exposed to different pollutants. Bacteria were collected from turtle eggs and their resistance to antibiotics was used as pollutant bio-indicators of contaminated effluents. Eggs were collected randomly from turtles when they were laying their eggs. A total of 90 eggs were collected and placed into sterile plastic bags (3 eggs/turtle) during June-December of 2003. The bacteria located in the eggshell, albumen and yolk were examined, and 42% of the eggs were contaminated with 10 genera of bacteria. Pseudomonas spp. were the most frequent isolates. The albumen was found to be the part of the egg to be the least contaminated by bacterial infection. Bacterial isolates tested with 14 antibiotics showed variations in resistance. Resistance to ampicillin was the highest. The presence of antibiotic resistant bacteria in eggs indicates that the green turtle populations were subjected to polluted effluents during some of their migratory routes and feeding habitats. Scanning electron microscopy revealed that Salmonella typhimurium penetrated all eggshell layers.


Tissue & Cell | 2009

Ultrastructural features and elemental distribution in eggshell during pre and post hatching periods in the green turtle, Chelonia mydas at Ras Al-Hadd, Oman

Saif N. Al-Bahry; I.Y. Mahmoud; Issa Al-Amri; Taher Ba-Omar; K.O. Melgheit; A.Y.A. AlKindi

Eggshells were randomly collected from turtle nests immediately after oviposition and at the end of incubation to examine the ultrastructural features using scanning JSM-5600LV microscopy. Three layers were recognized; an outer calcareous, a middle multistrata and an inner membrane. The calcareous layer had loose nodular units varying in shape and size without interlocking attachments. In freshly laid eggs, each nodular unit had spicules arranged in folded stacks. The spicules became unfolded during incubation, to form radiating configurations. Elemental composition and mapping of the layers were analyzed using energy dispersive spectroscopy (EDS). The elements were unevenly distributed throughout the eggshell and Ca(2+) decreased significantly after hatching. X-ray diffraction was used to identify the crystals of the eggshells. It revealed that nodular units of the calcareous were made up of CaCO(3), as aragonite (91%), calcite (6%) and vaterite (3%). The middle layer consisted of organic amorphous material with aragonite (89%) and calcite (11%). The shell membrane consisted of reticular fibers with crystals predominantly of NaCl halite. Thermogravimetry analysis of the calcareous layer indicated a complete evaporation of bonded H(2)O at 480 degrees C and CO(2) at 830 degrees C. Using the differential thermal analysis (DTA), aragonite was transformed to stable calcite at 425 degrees C.


Chelonian Conservation and Biology | 2006

The Effect of Physical and Human Factors on Beach Selection by Green Turtles (Chelonia mydas) at Ras Al-Hadd Reserve, Oman

A.Y.A. AlKindi; I.Y. Mahmoud; Aziz A. Al-Habsi; Saif N. Al-Bahry; Hamad M. Al-Gheilani; Charles S. Bakheit

ABSTRACT Beaches at Ras Al-Hadd Reserve, Oman, share common physical features ideal for nesting green turtles (Chelonia mydas). However, human activities related to commercial fishing and coastal development impact nesting. Beaches with hills as a backdrop and with minimal human activities were the primary nesting sites at the reserve. During peak nesting season (monsoon/wet period), the mean number of excavation attempts was equal between oviposited and nonoviposited turtles. During nonpeak season (dry period), the mean number of excavation attempts was significantly higher in nonoviposited turtles than in oviposited turtles, and insufficient sand moisture frequently resulted in one or several nest collapses and oviposition failure.


Zoology in The Middle East | 2005

Emergence pattern of the Green Turtle, Chelonia mydas, hatchlings under laboratory and natural conditions

I.Y. Mahmoud; A.Y.A. AlKindi; Taher Ba-Omar; Sultan Al-Siyabi; Saif N. Al-Bahry; Abdul Qader Elshafie; Charles S. Bakheit

Abstract Green Turtle eggs were collected at random from 5 different nests from the Ras Al-Hadd Reserve in Oman. They were incubated 16hr after oviposition at constant temperatures set at 30–31°C for female producers and at 26–27° for male producers. Standard histological procedure of the gonads was performed for sex determination. Despite the constant temperatures set in the incubators, there were differences among the incubated eggs. This is similar to the natural condition, where an asynchronous pattern of emergence is common. Pipping occurs when the eggshell has a slit and hatching is when the head and one flipper are outside the eggshell. Emergence occurs when the hatchling is completely free from the extraembryonic membranes and eggshell. There was no correlation between the pipping-hatching and hatching-emergence intervals in the female, but in males the two intervals were significantly correlated (P<0.01). Hatchling weights were: 28.22 g (±0.83) for females and 25.74 g (±0.58) for males. In both sexes, hatchling weight did not influence the duration of the two intervals. The duration between pipping emergence was significantly (P<0.01) longer in females than in males. Natural and incubator observations showed that the hatchlings remained in the nest after emergence for at least 48hr until the umbilical swelling had subsided before attempting their emergence escape. While the hatchlings remain inside the eggshell after pipping attached to chorioallontoic/amniotic membranes, they are occasionally vulnerable to injury by nesting turtles, micro-organisms or early-emerged hatchlings inside the nest.


Microscopy and Microanalysis | 2003

X-Ray Microanalysis and Image Mapping of Elements from Eggshells of Freshly Laid Eggs of Green Sea Turtles Chelonia mydas

Taher Ba-Omar; Issa Al-Amri; I.Y. Mahmoud; Saif N. Al-Bahry; A.Y.A. AlKindi; J.L. Plude

Green turtle Chelonia mydas eggs were taken at oviposition for X-ray microanalysis and image. Untreated eggshells were analyzed for elemental composition and image mapping with an Oxford energy dispersive x-ray spectrometer (EDS) operating at 20kV and a working distance (WD) of 20mm. This involved qualitative, quantitative and area analysis. Qualitative analysis of characteristic X-rays (elements) distribution was displayed as a spectrum. SEM Quant (Oxford Instruments Ltd.) was used for quantitative analysis with ZAF internal standardardization (5 iterations), all elements and element composition expressed as weight percent. Representative sites were chosen for area analysis or image mapping of element distribution.


Marine Pollution Bulletin | 2007

Biodegradation of crude oil and n-alkanes by fungi isolated from Oman.

Abdulkadir E. Elshafie; A.Y.A. AlKindi; Sultan Al-Busaidi; Charles S. Bakheit; Saif N. Al-Bahry


Tissue & Cell | 2006

Oviductal morphology in relation to hormonal levels in the snapping turtle, Chelydra serpentina

A.Y.A. AlKindi; I.Y. Mahmoud; M.J. Woller; J.L. Plude


Journal of Agricultural and Marine Sciences | 2011

Fish kill incidents and harmful algal blooms in Omani waters.

Hamed Mohammed Al Gheilani; Kazumi Matsuoka; A.Y.A. AlKindi; Shehla Amer; Colin P. Waring


Chelonian Conservation and Biology | 2007

Mycoflora and Aflatoxins in Soil, Eggshells, and Failed Eggs of Chelonia mydas at Ras Al-Jinz, Oman

Abdulkadir E. Elshafie; Saif N. Al-Bahry; A.Y.A. AlKindi; Taher Ba-Omar; I.Y. Mahmoud


Sultan Qaboos University Journal for Science | 2000

Endocrine, Physiological and Histopathological Responses of Fish and their Larvae to Stress with Emphasis on Exposure to Crude Oil and Various Petroleum Hydrocarbons

A.Y.A. AlKindi; J. A. Brown; C.P. Waring

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I.Y. Mahmoud

Sultan Qaboos University

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Taher Ba-Omar

Sultan Qaboos University

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Issa Al-Amri

Sultan Qaboos University

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J.L. Plude

University of Wisconsin–Oshkosh

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