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Featured researches published by Aa Francis.


Molecular Ecology | 2010

Ecological specialization in mycorrhizal symbiosis leads to rarity in an endangered orchid

N Swarts; Elizabeth A. Sinclair; Aa Francis; Kingsley W. Dixon

Terrestrial orchid germination, growth and development are closely linked to the establishment and maintenance of a relationship with a mycorrhizal fungus. Mycorrhizal dependency and specificity varies considerably between orchid taxa but the degree to which this underpins rarity in orchids is unknown. In the context of examining orchid rarity, large scale in vitro and in situ germination trials complemented by DNA sequencing were used to investigate ecological specialization in the mycorrhizal interaction of the rare terrestrial orchid Caladenia huegelii. Common and widespread sympatric orchid congeners were used for comparative purposes. Germination trials revealed an absolute requirement for mycorrhisation with compatibility barriers to germination limiting C. huegelii to a highly specific and range limited, efficacious mycorrhizal fungus. DNA sequencing confirmed fidelity between orchid and fungus across the distribution range of C. huegelii and at key life history stages within its life cycle. It was also revealed that common congeners could swap or share fungal partners including the fungus associated with the rare orchid but not vice versa. Data from this study provides evidence for orchid rarity as a cause and consequence of high mycorrhizal specialization. This interaction must be taken into account in efforts to mitigate the significant extinction risk for this species from anthropogenically induced habitat change and illustrates the importance of understanding fungal specificity in orchid ecology and conservation.


Australasian Plant Pathology | 2009

Ganoderma and Amauroderma species associated with root-rot disease of Acacia mangium plantation trees in Indonesia and Malaysia

M. Glen; Neale L. Bougher; Aa Francis; Susan Q. Nigg; S. S. Lee; Ragil Irianto; Km Barry; Christopher L. Beadle; Cl Mohammed

Fungal sporocarps and cultures associated with signs and symptoms of root-rot disease were collected from Acacia mangium and other tropical hardwood species. The collections were identified by either morphological characters and/or by phylogenetic analysis based on DNA sequences as Ganoderma philippii, G. mastoporum, G. aff. steyaertanum, G. australe and Amauroderma rugosum. Phylogenetic analysis unequivocally placed in the G. philippii clade four sequences amplified from A. mangium root and butt tissue showing clear signs of red root-rot disease (roots are covered by a red rhizomorphic skin). Whereas G. philippii was the most frequently encountered fungal species in A. mangium with red root-rot disease, this study indicates that other fungal species related to G. mastoporum may cause root-rot disease with very similar symptoms. An isolate (FRIM 138) that had caused red root-rot disease in artificial inoculations carried out before this study and was presumed to be G. philippii, is here determined to be closely related to G. mastoporum, G. cupreum and G. sinense. A Ganoderma species associated with a yellow-brown root-rot disease killing trees in an A. mangium plantation in Central Java, previously identified as G. lucidum, is shown by phylogenetic analysis to be closely related to G. steyaertanum, though some morphological characters vary from the original description of that species.


Forest Pathology | 2008

Management of fungal root‐rot pathogens in tropical Acacia mangium plantations

Alieta Eyles; Chris L. Beadle; Km Barry; Aa Francis; M. Glen; Cl Mohammed


Forest Pathology | 2014

Disease progression in plantations of Acacia mangium affected by red root rot (Ganoderma philippii)

Aa Francis; Chris L. Beadle; Desy Puspitasari; R. Irianto; Luciasih Agustini; Anto Rimbawanto; Abdul Gafur; E. Hardiyanto; Junarto; N. Hidyati; B. Tjahjono; U. Mardai; M. Glen; Cl Mohammed


Forest Pathology | 2014

Identification of basidiomycete fungi in Indonesian hardwood plantations by DNA barcoding

M. Glen; V. Yuskianti; Desy Puspitasari; Aa Francis; Luciasih Agustini; Anto Rimbawanto; H. Indrayadi; Abdul Gafur; Cl Mohammed


Forest Pathology | 2014

Species-specific PCR for rapid identification of Ganoderma philippii and Ganoderma mastoporum from Acacia mangium and Eucalyptus pellita plantations in Indonesia

V. Yuskianti; M. Glen; Desy Puspitasari; Aa Francis; Anto Rimbawanto; Abdul Gafur; H. Indrayadi; Cl Mohammed


Forest Pathology | 2014

Signs and identification of fungal root‐rot pathogens in tropical Eucalyptus pellita plantations

L. Agustini; Aa Francis; M. Glen; H. Indrayadi; Cl Mohammed


3rd Asian Conference on Plant Pathology | 2007

Management of fungal root rot in plantation acacias in Indonesia

Aa Francis; Chris L. Beadle; Anto Rimbawanto; Budi Tjahjono; M Mardai; J Junarto; G Pegg; Cl Mohammed


An Integrated Approach | 2009

Disease-management strategies for the rural sector that help deliver sustainable wood production from exotic plantations

Chris L. Beadle; Anto Rimbawanto; Aa Francis; M. Glen; David E. Page; Cl Mohammed


international conference on parallel processing | 2008

Basidiomycete root-rots of paper-pulp tree species in Indonesia - identity, biology and control

Aa Francis; Chris L. Beadle; M. Glen; M Mardai; Desy Puspitasari; Ragil Irianto; A Widyatmoko; Luciasih Agustini; Nur Hidayati; B Tjahjono; Abdul Gafur; E Hardiyanto; Mhp Junarto; I Heru; G Pegg; Anto Rimbawanto; Cl Mohammed

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Cl Mohammed

University of Tasmania

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M. Glen

University of Tasmania

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Km Barry

University of Tasmania

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Elizabeth A. Sinclair

University of Western Australia

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