Abdul Hamid Ahmad

The Value of Rehabilitating Logged Rainforest for Birds

The recent advent of carbon crediting has led to a rapid rise in biosequestration projects that seek to remove carbon from the atmosphere through afforestation and forest rehabilitation. Such projects also present an important potential opportunity to reverse biodiversity losses resulting from deforestation and forest degradation, but the biodiversity benefits of different forms of biosequestration have not been considered adequately. We captured birds in mist nets to examine the effects of rehabilitation of logged forest on birds in Sabah, Borneo, and to test the hypothesis that rehabilitation restores avian assemblages within regenerating forest to a condition closer to that seen in unlogged forest. Species richness and diversity were similar in unlogged and rehabilitated forest, but significantly lower in naturally regenerating forest. Rehabilitation resulted in a relatively rapid recovery of populations of insectivores within logged forest, especially those species that forage by sallying, but had a marked adverse effect on frugivores and possibly reduced the overall abundance of birds within regenerating forest. In view of these results, we advocate increased management for heterogeneity within rehabilitated forests, but we strongly urge an increased role for forest rehabilitation in the design and implementation of a biodiversity-friendly carbon-offsetting market.

Genetics and the last stand of the Sumatran rhinoceros Dicerorhinus sumatrensis

The Sumatran rhinoceros Dicerorhinus sumatrensis is on the brink of extinction. Although habitat loss and poaching were the reasons of the decline, todays reproductive isolation is the main threat to the survival of the species. Genetic studies have played an important role in identifying conservation priorities, including for rhinoceroses. However, for a species such as the Sumatran rhinoceros, where time is of the essence in preventing extinction, to what extent should genetic and geographical distances be taken into account in deciding the most urgently needed conservation interventions? We propose that the populations of Sumatra and Borneo be considered as a single management unit.

Species Richness and Distribution of Primates in Disturbed and Converted Forest Landscapes in Northern Borneo

Knowledge of fundamental aspects of ecology such as species richness and distribution, and the factors affecting them, is increasingly used to identify priority areas for conservation and to effectively manage threatened species. We investigated the species richness and distribution pattern of nonhuman primate communities inhabiting 10 sampling sites in four different habitat classes corresponding to increasing habitat disturbance level, that is, old growth forest, twice logged forest, repeatedly logged forest, and oil palm plantation, in and around Kalabakan Forest Reserve, in central Sabah, Malaysian Borneo. By using direct and indirect survey methods, we confirmed the existence of 9 out of the total 10 primate species, found in Sabah, within the surveyed areas. Based on the monthly number of primate species detected, our results indicated a general trend of decreasing primate species richness with increasing habitat disturbance level. However, the response within the disturbed forest sites showed some variations with some sites in repeatedly logged forest displaying comparable primate species number to that of the undisturbed forest sites. We also found that within the forest habitats, tree density is a good predictor of the richness of the primate community with a positive effect. Hence, tree density may be a key indicator for evaluating primate communities in forest habitats. Overall, the results of our study suggest that although not equivalent to areas of undisturbed forest, degraded forests—including those that have been repeatedly logged—are still valuable for primate conservation. In contrast, oil palm plantations have mainly negative effects on the primate community.

Terrestrial Mammal Species Richness and Composition in Three Small Forest Patches within an Oil Palm Landscape in Sabah, Malaysian Borneo

Abstract. Small and highly degraded forest patches are usually scattered across oil palm plantation landscapes and often exist as permanent features. By using a combination of camera-trapping and line-transect methods, we evaluated the usefulness of three such forest patches (< 30 ha) for terrestrial mammal species conservation in a mature oil palm plantation located near (< 1.7 km) a large continuous tract of logged forest in eastern Sabah, Malaysian Borneo. Of the 29 terrestrial mammal species recorded in this study, 28 were found in the continuous logged forest habitat including six species that are either large-bodied, wide ranging, locally rare or are of high conservation concern. In comparison, 18 species were recorded across the three forest patches collectively; consisting mostly of species that are widespread, well-adapted to living in highly modified habitats and of low conservation concern. The presence of small forest patches within the oil palm habitat matrix seemed to be useful to some extent for some mammal species. However, many of the species were likely only transient in this habitat. The maintenance of large continuous tracts of natural forest is critical to the continued survival of many terrestrial mammal species on Borneo, particularly for species that are of high conservation value.

A Survey of Acarine Ectoparasites of Bats (Chiroptera) in Malaysia

ABSTRACT A comprehensive 8-yr survey of acarine ectoparasites (ticks and mites) of bats was carried out in 18 localities from 2002 to 2009. Most of the surveys were conducted during 14 national biodiversity scientific expeditions throughout Malaysia. The objective was to identify acarines of known public health importance from bats and thus determine whether there is any potential public health risk in Malaysia. Trapping of bats was conducted using Harp traps and Mist nets. In total, 1,579 individuals comprising of 6 families and 52 species of bats were examined alive. In general, 25.6% of the bats were infested with acarines. Infestation rates of ticks, mesostigmatid mites, and chiggers on bats examined were 0.4, 10.4, and 14.7%, respectively. Their prevalence and mean intensity were tabulated. Genera of ticks extracted were Amblyomma, Dermacentor, Ixodes, and Ornithodoros. Of these genera, only two species can be identified to species level and they are Amblyomma cordiferum and Ixodes simplex. In total, 8 genera and 15 species of mesostigmatid mites were found; the species were Ancystropus eonycteris, Ancystropus zeleborii, Echinonysus nasutus, Laelaps aingworthae, Laelaps nuttalli, Laelaps sanguisugus, Laelaps sculpturatus, Longolaelaps longulus, Longolaelaps whartonii, Meristaspis lateralis, Meristaspis macroglossi, Paraperiglischrus rhinolophinus, Spinturnix acuminatus, Spinturnix americanus, and Spinturnix bakeri. Chiggers on bats were represented by 12 genera and 6 species; the species identified were Gahrliepia fletcheri, Riedlinia lipoxena, Trombigastia cadei, Walchiella impar, Walhiella oudemansi, and Whartonia caobangensis. The study produced an up-to-date list of acarine ectoparasites of bats in Malaysia where a total of 38 genera and 47 species of acarines were listed. Findings of the study demonstrated that 5 genera and 1 species of acarines that may pose potential health risks, can be found on bats.

Blood meal analysis of tabanid fly after it biting the rare Sumatran rhinoceros.

OBJECTIVE To demonstrate a noninvasive large mammalian genetic sampling method using blood meal obtained from a tabanid fly. METHODS Blood meal was recovered from the abdomen of an engorged tabanid fly (Haematopota sp.) which was captured immediately after biting a Sumatran rhino in captivity. The blood was applied on to a Whatman FTA(®) blood card. Subsequent laboratory work was conducted to extract, amplify and sequence the DNA from the sample. Validation was done by sampling the hair follicles and blood samples from the rhinoceros and subjecting it to the same laboratory process. RESULTS BLAST search and constructed phylogenetic trees confirmed the blood meal samples were indeed from the rhino. CONCLUSIONS This method could be used in the field application to noninvasively collect genetic samples. Collection of tabanids and other haematophagous arthropods (e.g. mosquitoes and ticks) and other blood-sucking parasites (e.g. leeches and worms) could also provide information on vector-borne diseases.

First molecular data on Bornean banteng Bos javanicus lowi (Cetartiodactyla, Bovidae) from Sabah, Malaysian Borneo

Abstract Phylogenetic relationships among three subspecies of banteng, Burma banteng Bos javanicus birmanicus in mainland Southeast Asia, Javan banteng Bos javanicus javanicus in Java, and Bornean banteng Bos javanicus lowi in Borneo, and the presence/absence of interbreeding between wild Bornean banteng and domestic cattle in Sabah, Malaysia, were investigated by partial sequences of cytochrome b and D-loop of mitochondrial DNA. The results show that genetic distance of the Bornean banteng are relatively close to the gaur Bos gaurus/gayal Bos frontalis (the cytochrome b, 0.004–0.025; the D-loop, 0.012–0.021) followed by Burma banteng (the cytochrome b, 0.027–0.035; the D-loop, 0.040–0.045), and kouprey Bos sauveli (the cytochrome b, 0.031–0.035; the D-loop, 0.037–0.042). There are much greater distances between Bornean banteng and domestic cattle, Bos taurus and Bos indicus (the cytochrome b, 0.059–0.076; the D-loop, 0.081–0.090). These results suggest that the Bornean banteng diverged genetically from other banteng subspecies and that the wild Bornean banteng from this study are pure strain and have high conservation value.

Fruit selection of a binturong (Arctictis binturong) by focal animal sampling in Sabah, Malaysian Borneo

Abstract We investigated fruit selection of a radio-collared female binturong (Arctictis binturong pageli Schwarz, 1911) by focal animal sampling in Sabah, Malaysian Borneo. We recorded seven food species from 12 feeding trees over 16 months. The radio-collared binturong fed only ripe fig fruits (Ficus spp., Moraceae), suggesting that her diet largely depended on figs. As the present study was based on only one female individual, more efforts are needed to elucidate the feeding ecology of this cryptic carnivore.

Complete mitochondrial genomes of the tooth of a poached Bornean banteng (Bos javanicus lowi; Cetartiodactyla, Bovidae)

Abstract Here we report the complete mitochondrial genome of the Bornean banteng Bos javanicus lowi (Cetartiodactyla, Bovidae), which was determined using next-generation sequencing. The mitochondrial genome is 16,344 bp in length containing 13 protein-coding genes, 21 tRNAs and 2 rRNAs. It shows the typical pattern of bovine mitochondrial arrangement. Phylogenetic tree analysis of complete mtDNA sequences showed that Bornean banteng is more closely related to gaur than to other banteng subspecies. Divergence dating indicated that Bornean banteng and gaur diverged from their common ancestor approximately 5.03 million years ago. These results suggest that Bornean banteng might be a distinct species in need of conservation.

Social structure and reproduction of long-tailed porcupine (Trichys fasciculata)

Abstract We studied the social structure of long-tailed porcupine (Trichys fasciculata) in the tropical rainforest in Sabah, Borneo Island, Malaysia via direct observation assisted by radio-tracking and camera-trapping at burrow entrances. We identified and observed seven individuals in the study area, of which five were radio-tagged. Analysis of their burrow use, home range, and behaviour strongly suggested that five of the observed individuals formed a family group consisting of an adult male–female pair and their three offspring, two of which were born during the study period. The family members used the same burrow site almost every day, and their home ranges largely overlapped. In contrast, the other two individuals never used the burrow sites of this family group. The adult male–female pair was maintained for at least 18 months and reproduced twice during the study period. They had a litter size of one, and the inter-litter interval was estimated to be 11 months. During these two reproductions, the previous litter stayed in the natal family group as a sub-adult after the next juvenile was born. Direct paternal care, such as grooming the juvenile, was also observed. Their low reproductive potential should be considered in conservation efforts.