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Dive into the research topics where Abdullah Ali is active.

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Featured researches published by Abdullah Ali.


Blood Advances | 2018

Severely impaired terminal erythroid differentiation as an independent prognostic marker in myelodysplastic syndromes

Abdullah Ali; Yumin Huang; Ronald Feitosa Pinheiro; Fumin Xue; Jingping Hu; Nicholas Iverson; Daniela Hoehn; Diego Coutinho; Jehanzeb Kayani; Brian Chernak; Joseph M. Lane; Christopher D. Hillyer; Naomi Galili; Joseph G. Jurcic; Narla Mohandas; Xiuli An; Azra Raza

Anemia is the defining feature in most patients with myelodysplastic syndromes (MDS), yet defects in erythropoiesis have not been well characterized. We examined freshly obtained bone marrow (BM) samples for stage-specific abnormalities during terminal erythroid differentiation (TED) from 221 samples (MDS, n = 205 from 113 unique patients; normal, n = 16) by measuring the surface expression of glycophorin A, band 3, and integrin α-4. Clinical and biologic associations were sought with presence or absence of TED and the specific stage of erythroid arrest. In 27% of MDS samples (56/205), there was no quantifiable TED documented by surface expression of integrin α-4 and band 3 by terminally differentiating erythroblasts. Absence of quantifiable TED was associated with a significantly worse overall survival (56 vs 103 months, P = .0001) and SRSF2 mutations (7/23, P < .05). In a multivariable Cox proportional hazards regression analysis, absence of TED remained independently significant across International Prognostic Scoring System-Revised (IPSS-R) categories, myeloid/erythroid ratio, and mutations in several genes. In 149/205 MDS samples, the proportion of cells undergoing TED did not follow the expected 1:2:4:8:16 doubling pattern in successive stages. Absence of TED emerged as a powerful independent prognostic marker of poor overall survival across all IPSS-R categories in MDS, and SRSF2 mutations were more frequently associated with absence of TED.


Expert opinion on orphan drugs | 2016

Rigosertib in myelodysplastic syndromes (MDS)

Azra Raza; Abdullah Ali; M. V. R. Reddy; B. S. Hoffman; M. E. Petrone; M. Maniar; R. F. Pinheiro; D. F. Coutinho; S. M. Fruchtman

ABSTRACT Introduction: Therapeutic options for myelodysplastic syndromes (MDS) are limited to hypomethylating agents (HMA) and lenalidomide. Rigosertib, a small molecule which blocks RAS-mediated activation of proteins containing a common RAS binding domain, appears to be a promising novel drug. Areas covered: Discovery, mechanism of action of rigosertib, and results of clinical trials are described. More than 500 patients have been treated and the safety, pharmacokinetics, and efficacy of rigosertib are summarized. These studies are placed in the context of the history of therapeutic development in MDS and the promise of new, tailored treatments based on emerging knowledge of the heterogeneity and molecular biology of the disease. Expert opinion: In summary, the Phase III study failed to meet the primary endpoint but clearly showed significant improvement in survival in a subset of very high risk MDS patients who were primary HMA failures. A new Phase III trial designed to validate these findings is now ongoing. Oral rigosertib, in a Phase II trial, produced transfusion independence in ~35% patients with lower risk MDS with or without recombinant erythropoietin. A methylation based signature appears to distinguish between the two groups. Validation of these early encouraging observations through future clinical trials is eagerly anticipated.


Molecular and Cellular Oncology | 2016

Two different “tales” of ATG7: Clinical relevance to myelodysplastic syndromes

Abdullah Ali; Azra Raza

ABSTRACT Somatic mutations in U2 Small Nuclear RNA Auxiliary Factor 1 (U2AF1) are associated with various cancers including myelodysplastic syndrome (MDS). Mutant U2AF1 promotes malignant transformation by inhibiting autophagy, partly as a result of alterations in the 3′ tail of ATG7. This results in altered mitochondrial function, increased reactive oxygen species production, and genomic instability.


Cancer Cell | 2016

Physiologic Expression of Sf3b1(K700E) Causes Impaired Erythropoiesis, Aberrant Splicing, and Sensitivity to Therapeutic Spliceosome Modulation.

Esther A. Obeng; Ryan J. Chappell; Michael Seiler; Michelle Chen; Dean R. Campagna; Paul J. Schmidt; Rebekka K. Schneider; Allegra M. Lord; Lili Wang; Rutendo Gambe; Marie McConkey; Abdullah Ali; Azra Raza; Lihua Yu; Silvia Buonamici; Peter G. Smith; Ann Mullally; Catherine J. Wu; Mark D. Fleming; Benjamin L. Ebert


Blood | 2013

Oral Rigosertib (ON 01910.Na) Treatment Produces An Encouraging Rate Of Transfusion Independence In Lower Risk Myelodysplastic Syndromes (MDS) Patients; A Genomic Methylation Profile Is Associated With Responses

Benjamin Tycko; Sangmin Lee; Naomi Galili; Abdullah Ali; Andrew Eisenberger; John Gregory Mears; Aref Al-Kali; Raoul Tibes; Gary Spitzer; Francois Wilhelm; Siddhartha Mukherjee


Journal of Clinical Oncology | 2016

Comparison of International Prognostic Scoring System (IPSS) and Revised IPSS (IPSS-R) in myelodysplastic syndromes (MDS).

Muhammad Umair Mushtaq; Abdullah Ali; Kiyomi Morita; Ronald Feitosa Pinheiro; Muhammad Baig; Azra Raza


Journal of Clinical Oncology | 2016

Prognostic significance of neutrophil-to-lymphocyte ratio and lymphocyte-to-monocyte ratio in myelodysplastic syndromes.

Muhammad Umair Mushtaq; Abdullah Ali; Kiyomi Morita; Ronald Feitosa Pinheiro; Azra Raza


Journal of Clinical Oncology | 2016

Prognostic significance of bone marrow cellularity in myelodysplastic syndromes: a retrospective analysis.

Kiyomi Morita; Abdullah Ali; Diego Coutinho; Muhammad Umair Mushtaq; Azra Raza


Blood | 2016

A Genomic Predictive Signature for Rigosertib in Lower Risk MDS Derived By Integrating Clinical Response, Mechanism of Action Data and Simulation

Steven M. Fruchtman; Abdullah Ali; Michael E. Petrone; Patrick Simon Zbyszewski; Benjamin Hoffman; Shireen Vali; Neeraj Kumar Singh; Shahabuddin Usmani; Himanshu Grover; Taher Abbasi; Azra Raza


Blood | 2014

Loss of TET2 Function in Myelodysplastic Syndrome Results in Intragenic Hypermethylation and Alterations in mRNA Splicing

Allegra M. Lord; Kendell Clement; Rebekka K. Schneider; McConkey Marie; Michelle Chen; Ross L. Levine; Ann Mullally; Naomi Galili; Abdullah Ali; Azra Raza; Rafael Bejar; Alexander Meissner; Benjamin L. Ebert

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Azra Raza

Columbia University Medical Center

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Naomi Galili

Columbia University Medical Center

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Ann Mullally

Brigham and Women's Hospital

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Benjamin L. Ebert

Brigham and Women's Hospital

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Diego Coutinho

Columbia University Medical Center

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