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Dive into the research topics where Abhilash Rakkunedeth Hareendranathan is active.

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Featured researches published by Abhilash Rakkunedeth Hareendranathan.


Computer Methods and Programs in Biomedicine | 2016

Toward automated classification of acetabular shape in ultrasound for diagnosis of DDH

Abhilash Rakkunedeth Hareendranathan; Myles Mabee; Kumaradevan Punithakumar; Michelle Noga; Jacob L. Jaremko

BACKGROUND AND OBJECTIVES The diagnosis of Developmental Dysplasia of the Hip (DDH) in infants is currently made primarily by ultrasound. However, two-dimensional ultrasound (2DUS) images capture only an incomplete portion of the acetabular shape, and the alpha and beta angles measured on 2DUS for the Graf classification technique show high inter-scan and inter-observer variability. This variability relates partly to the manual determination of the apex point separating the acetabular roof from the ilium during index measurement. This study proposes a new 2DUS image processing technique for semi-automated tracing of the bony surface followed by automatic calculation of two indices: a contour-based alpha angle (αA), and a new modality-independent quantitative rounding index (M). The new index M is independent of the apex point, and can be directly extended to 3D surface models. METHODS We tested the proposed indices on a dataset of 114 2DUS scans of infant hips aged between 4 and 183 days scanned using a 12MHz linear transducer. We calculated the manual alpha angle (αM), coverage, contour-based alpha angle and rounding index for each of the recordings and statistically evaluated these indices based on regression analysis, area under the receiver operating characteristic curve (AUC) and analysis of variance (ANOVA). RESULTS Processing time for calculating αA and M was similar to manual alpha angle measurement, ∼30s per image. Reliability of the new indices was high, with inter-observer intraclass correlation coefficients (ICC) 0.90 for αA and 0.89 for M. For a diagnostic test classifying hips as normal or dysplastic, AUC was 93.0% for αA vs. 92.7% for αM, 91.6% for M alone, and up to 95.7% for combination of M with αM, αA or coverage. CONCLUSIONS The rounding index provides complimentary information to conventional indices such as alpha angle and coverage. Calculation of the contour-based alpha angle and rounding index is rapid, shows potential to improve the reliability and accuracy of DDH diagnosis from 2DUS, and could be extended to 3D ultrasound in future.


Pediatric Radiology | 2016

An index for diagnosing infant hip dysplasia using 3-D ultrasound: the acetabular contact angle

Myles Mabee; Abhilash Rakkunedeth Hareendranathan; Richard B. Thompson; Sukhdeep Dulai; Jacob L. Jaremko

BackgroundDevelopmental dysplasia of the hip (DDH) is a common condition that is highly treatable in infancy but can lead to the lifelong morbidity of premature osteoarthritis if left untreated. Current diagnostic methods lack reliability, which may be improved by using 3-D ultrasound.ObjectiveConventional 2-D US assessment of DDH has limitations, including high inter-scan variability. We quantified DDH on 3-D US using the acetabular contact angle (ACA), a property of the 3-D acetabular shape. We assessed ACA reliability and diagnostic utility.Materials and methodsWe prospectively collected data from January 2013 to December 2014, including 114 hips in 85 children divided into three clinical diagnostic groups: (1) normal, (2) initially borderline but ultimately normal without treatment and (3) dysplastic requiring treatment. Using custom software, two observers each traced acetabula twice on two 3-D US scans of each hip, enabling automated generation of 3-D surface models and ACA calculation. We computed inter-observer and inter-scan variability of repeatability coefficients and generated receiver operating characteristic (ROC) curves.ResultsThe 3-D US acetabular contact angle was reproduced 95% of the time within 6° in the same scan and within 9° in different scans of the same hip, vs. 9° and 14° for the 2-D US alpha angle (P < 0.001). Areas under ROC curves for diagnosis of developmental dysplasia of the hip were 0.954 for ACA and 0.927 for alpha angle.ConclusionThe 3-D US ACA was significantly more reliable than 2-D US alpha angle, and the 3-D US measurement predicted the presence of DDH with slightly higher accuracy. The ACA therefore shows promising initial diagnostic utility. Our findings call for further study of 3-D US in the diagnosis and longer-term follow-up of infant hip dysplasia.


Radiology | 2018

Developmental Hip Dysplasia Diagnosis at Three-dimensional US: A Multicenter Study

Dornoosh Zonoobi; Abhilash Rakkunedeth Hareendranathan; Emanuel Mostofi; Myles Mabee; Saba Pasha; Dana Cobzas; Padma Rao; Sukhdeep Dulai; Jeevesh Kapur; Jacob L. Jaremko

Purpose To validate accuracy of diagnosis of developmental dysplasia of the hip (DDH) from geometric properties of acetabular shape extracted from three-dimensional (3D) ultrasonography (US). Materials and Methods In this retrospective multi-institutional study, 3D US was added to conventional two-dimensional (2D) US of 1728 infants (mean age, 67 days; age range, 3-238 days) evaluated for DDH from January 2013 to December 2016. Clinical diagnosis after more than 6 months follow-up was normal (n = 1347), borderline (Graf IIa, later normalizing spontaneously; n = 140) or dysplastic (Graf IIb or higher, n = 241). Custom software accessible through the institutions research portal automatically calculated indexes including 3D posterior and anterior alpha angle and osculating circle radius from hip surface models generated with less than 1 minute of user input. Logistic regression predicted clinical diagnosis (normal = 0, dysplastic = 1) from 3D indexes (ie, age and sex). Output represented probability of hip dysplasia from 0 to 1 (output: >0.9, dysplastic; 0.11-0.89, borderline; <0.1, normal). Software can be accessed through the research portal. Results Area under the receiver operating characteristic curve was equivalently high for 3D US indexes and 2D US alpha angle (0.996 vs 0.987). Three-dimensional US helped to correctly categorize 97.5% (235 of 241) dysplastic and 99.4% (1339 of 1347) normal hips. No dysplastic hips were categorized as normal. Correct diagnosis was provided at initial 3D US scan in 69.3% (97 of 140) of the studies diagnosed as borderline at initial 2D US scans. Conclusion Automatically calculated 3D indexes of acetabular shape performed equivalently to high-quality 2D US scans at tertiary medical centers to help diagnose DDH. Three-dimensional US reduced the number of borderline studies requiring follow-up imaging by over two-thirds.


international conference of the ieee engineering in medicine and biology society | 2016

Hip segmentation from MRI volumes in infants for DDH diagnosis and treatment planning

Abhilash Rakkunedeth Hareendranathan; Dornoosh Zonoobi; Myles Mabee; Chad Diederichs; Kumaradevan Punithakumar; Michelle Noga; Jacob L. Jaremko

Diagnosis and surgical management of Developmental Dysplasia of the Hip (DDH) relies on physical examination and 2D ultrasound scanning. Magnetic Resonance Imaging (MRI) can be used to complement existing techniques and could be advantageous in treatment planning due to its larger field of view. In this paper we propose a semi-automatic method to segment surface models of the acetabulum from MRI images. The method incorporates clinical knowledge in the form of intensity priors which are integrated into a Random Walker (RW) formulation. We use a modified RW framework which compensates for incomplete or blurred boundaries in the image by using information from neighboring slices in the sequence incorporated as node weights. We conducted a pilot study to evaluate the segmentation on a set of 10 infant hip MRI sequences using a 1.5 Tesla MR scanner. Contours obtained from the semi-automated segmentation were compared against manually segmented hip contours using Dice Ratio (DR), Hausdorff Distance (HD) and Root Mean Square (RMS) distance. The proposed method gave values of (DR = 0.84 ± 0.5, HD =3.0 ± 0.7, RMS =1.9 ± 0.3) and (DR=0.86 ± 0.2, HD=3.0 ± 0.1, RMS= 2.0 ± 0.6) for right and left acetabular contours respectively which was higher than the corresponding values obtained from conventional RW segmentation. The execution time of the segmentation algorithm was less than ~4 seconds on a 3.5 GHz CPU.


Journal of Biomechanical Engineering-transactions of The Asme | 2018

Hip Joint Contact Pressure Distribution During Pavlik Harness Treatment of an Infant Hip: A Patient-Specific Finite Element Model

Behzad Vafaeian; Samer Adeeb; Marwan El-Rich; Dornoosh Zonoobi; Abhilash Rakkunedeth Hareendranathan; Jacob L. Jaremko

Developmental dysplasia of the hip (DDH) in infants under 6 months of age is typically treated by the Pavlik harness (PH). During successful PH treatment, a subluxed/dislocated hip is spontaneously reduced into the acetabulum, and DDH undergoes self-correction. PH treatment may fail due to avascular necrosis (AVN) of the femoral head. An improved understanding of mechanical factors accounting for the success/failure of PH treatment may arise from investigating articular cartilage contact pressure (CCP) within a hip during treatment. In this study, CCP in a cartilaginous infant hip was investigated through patient-specific finite element (FE) modeling. We simulated CCP of the hip equilibrated at 90 deg flexion at abduction angles of 40 deg, 60 deg, and 80 deg. We found that CCP was predominantly distributed on the anterior and posterior acetabulum, leaving the superior acetabulum (mainly superolateral) unloaded. From a mechanobiological perspective, hypothesizing that excessive pressure inhibits growth, our results qualitatively predicted increased obliquity and deepening of the acetabulum under such CCP distribution. This is the desired and observed therapeutic effect in successful PH treatment. The results also demonstrated increase in CCP as abduction increased. In particular, the simulation predicted large magnitude and concentrated CCP on the posterior wall of the acetabulum and the adjacent lateral femoral head at extreme abduction (80 deg). This CCP on lateral femoral head may reduce blood flow in femoral head vessels and contribute to AVN. Hence, this study provides insight into biomechanical factors potentially responsible for PH treatment success and complications.


European Radiology | 2018

Reliability of 2D and 3D ultrasound for infant hip dysplasia in the hands of novice users

Emanuel Mostofi; Baljot S. Chahal; Dornoosh Zonoobi; Abhilash Rakkunedeth Hareendranathan; Koosha Pourtahmasi Roshandeh; Sukhdeep Dulai; Jacob L. Jaremko

PurposeDevelopmental dysplasia of the hip (DDH) diagnosis by two-dimensional ultrasound (2DUS) can have poor inter-rater reliability. 3D ultrasound (3DUS) may be more reliably performed, particularly by novice users. We compared intra- and inter-rater reliability between expert and novice operators performing 2DUS and 3DUS for DDH.Materials and methodsInfants with suspected DDH were assessed with 2DUS and 3DUS. Novice operators had 1.5 h of training and Experts had 5–15 years’ experience. Images included two 2DUS static and two 3DUS sweep images per operator. Image quality was assessed by 5-point system (yes/no: full femoral head; full acetabular roof; horizontal iliac wing; os ischium; absent motion/artifact). 2DUS indices (alpha angle, coverage) were measured centrally by a blinded reader with 2 years DDH US experience. 3DUS was post-processed by semi-automated custom software generating acetabular surface models, indices and estimated probability of DDH. Gold-standard diagnosis of each hip as normal, borderline or dysplastic was based on radiologist review of expert 2DUS.ResultsThirty infants, mean age 10.8 weeks were enrolled. Quality scores were 2.7±1.2 Novice versus 4.9±0.3 Expert for 2DUS (p = 0.04), and 4.2±1.0 Novice versus 4.9±0.3 Expert for 3DUS (p = 0.99). Inter-rater reliability was poor for 2DUS (ICC=0.10 for alpha angle, 0.04 for acetabular coverage) and moderate to high for 3DUS (ICC=0.73-0.83 for alpha angle, 0.55 for acetabular coverage). Intra-rater reliability and diagnostic accuracy was higher for 3DUS than 2DUS.ConclusionNovice operators can perform 3DUS for DDH with reliability and accuracy approaching expert sonographers. Novices perform 2DUS with poor reliability and accuracy.Key Points• Novice/expert inter-rater reliability improved from poor with 2DUS to moderate/high with 3DUS.• Novice operators using 3DUS correctly classified 57/58 (98%) of infant hips.• DDH can be reliably assessed by novice operators using 3DUS.


international symposium on biomedical imaging | 2017

Toward automatic diagnosis of hip dysplasia from 2D ultrasound

Abhilash Rakkunedeth Hareendranathan; Dornoosh Zonoobi; Myles Mabee; Dana Cobzas; Kumaradevan Punithakumar; Michelle Noga; Jacob L. Jaremko

Developmental dysplasia of the hip (DDH) is a congenital deformity occurring in ∼3% of infants. If diagnosed early most cases of DDH can be effectively treated using a Pavlik harness. However, current diagnosis of DDH using 2D ultrasound is and can have high inter-operator variability. In this paper we propose a method to automatically segment the acetabulum bone and derive geometric indices of hip dysplasia from this model. In the proposed method, using multi-scale superpixels, we incorporate global and local image features into a Deep Learning framework to obtain a probability map of the bone to be segmented and then use this map in probabilistic graph search to guide the segmentation. Clinically relevant geometric measures of hip dysplasia, including a new index of acetabular rounding, are then automatically calculated from the segmented acetabulum contour. We tested this method on 2D ultrasound of 50 infant hips and the contours generated matched closely with manual segmentations at root mean square error 1.8±0.7 mm and Hausdorff distance 2.1±0.9 mm. In this pilot data, the measured indices of dysplasia give an area under the curve of 86.2% for classifying normal vs dysplastic hips. The proposed approach could be used clinically for accurate and automatic diagnosis of hip dysplasia in infants.


international conference of the ieee engineering in medicine and biology society | 2016

Multiview echocardiography fusion using an electromagnetic tracking system

Kumaradevan Punithakumar; Abhilash Rakkunedeth Hareendranathan; Riitta Paakkanen; Nehan Khan; Michelle Noga; Pierre Boulanger; Harald Becher

Three-dimensional ultrasound is an emerging modality for the assessment of complex cardiac anatomy and function. The advantages of this modality include lack of ionizing radiation, portability, low cost, and high temporal resolution. Major limitations include limited field-of-view, reliance on frequently limited acoustic windows, and poor signal to noise ratio. This study proposes a novel approach to combine multiple views into a single image using an electromagnetic tracking system in order to improve the field-of-view. The novel method has several advantages: 1) it does not rely on image information for alignment, and therefore, the method does not require image overlap; 2) the alignment accuracy of the proposed approach is not affected by any poor image quality as in the case of image registration based approaches; 3) in contrast to previous optical tracking based system, the proposed approach does not suffer from line-of-sight limitation; and 4) it does not require any initial calibration. In this pilot project, we were able to show that using a heart phantom, our method can fuse multiple echocardiographic images and improve the field-of view. Quantitative evaluations showed that the proposed method yielded a nearly optimal alignment of image data sets in three-dimensional space. The proposed method demonstrates the electromagnetic system can be used for the fusion of multiple echocardiography images with a seamless integration of sensors to the transducer.


international conference of the ieee engineering in medicine and biology society | 2016

Patient movement compensation for 3D echocardiography fusion

Abhilash Rakkunedeth Hareendranathan; Michelle Hanbidge; Allen He; Michelle Noga; Pierre Boulanger; Harald Becher; Kumaradevan Punithakumar

Limited field of view (FOV) is a major problem for 3D real-time echocardiography (3DRTE), which results in an incomplete representation of cardiac anatomy. Various image registration techniques have been proposed to improve the field of view in 3DRTE by fusing multiple image volumes. However, these techniques require significant overlap between the individual volumes and rely on high image resolution and high signal-to-noise ratio. Changes in the heart position due to patient movement during image acquisition can also reduce the quality of image fusion. In this paper, we propose a multi-camera based optical tracking system which 1) eliminates the need for image overlap and 2) compensates for patient movement during acquisition. We compensate for patient movement by continuously tracking the patient position using skin markers and incorporating this information into the fusion process. We fuse volumes acquired during R-R wave peaks based on Electrocardiogram (ECG) data to account for retrospective image acquisition. The fusion technique was validated using a heart phantom (Shelley Medical Imaging Technologies) and on one healthy volunteer. The fused ultrasound volumes could be generated in within 2 seconds and were found to have complete myocardial boundaries alignment upon visual assessment. No stitching artefacts or movement related artefacts were observed in the fused image.


computer assisted radiology and surgery | 2016

A technique for semiautomatic segmentation of echogenic structures in 3D ultrasound, applied to infant hip dysplasia

Abhilash Rakkunedeth Hareendranathan; Myles Mabee; Kumaradevan Punithakumar; Michelle Noga; Jacob L. Jaremko

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Dornoosh Zonoobi

National University of Singapore

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