Adam Kohn

Stimulus onset quenches neural variability: a widespread cortical phenomenon

Neural responses are typically characterized by computing the mean firing rate, but response variability can exist across trials. Many studies have examined the effect of a stimulus on the mean response, but few have examined the effect on response variability. We measured neural variability in 13 extracellularly recorded datasets and one intracellularly recorded dataset from seven areas spanning the four cortical lobes in monkeys and cats. In every case, stimulus onset caused a decline in neural variability. This occurred even when the stimulus produced little change in mean firing rate. The variability decline was observed in membrane potential recordings, in the spiking of individual neurons and in correlated spiking variability measured with implanted 96-electrode arrays. The variability decline was observed for all stimuli tested, regardless of whether the animal was awake, behaving or anaesthetized. This widespread variability decline suggests a rather general property of cortex, that its state is stabilized by an input.

Measuring and interpreting neuronal correlations

Mounting evidence suggests that understanding how the brain encodes information and performs computations will require studying the correlations between neurons. The recent advent of recording techniques such as multielectrode arrays and two-photon imaging has made it easier to measure correlations, opening the door for detailed exploration of their properties and contributions to cortical processing. However, studies have reported discrepant findings, providing a confusing picture. Here we briefly review these studies and conduct simulations to explore the influence of several experimental and physiological factors on correlation measurements. Differences in response strength, the time window over which spikes are counted, spike sorting conventions and internal states can all markedly affect measured correlations and systematically bias estimates. Given these complicating factors, we offer guidelines for interpreting correlation data and a discussion of how best to evaluate the effect of correlations on cortical processing.

Stimulus dependence of neuronal correlation in primary visual cortex of the macaque

Nearby cortical neurons often have correlated trial-to-trial response variability, and a significant fraction of their spikes occur synchronously. These two forms of correlation are both believed to arise from common synaptic input, but the origin of this input is unclear. We investigated the source of correlated responsivity by recording from pairs of single neurons in primary visual cortex of anesthetized macaque monkeys and comparing correlated variability and synchrony for spontaneous activity and activity evoked by stimuli of different orientations and contrasts. These two stimulus manipulations would be expected to have different effects on the cortical pool providing input to the recorded pair: changing stimulus orientation should recruit different populations of cells, whereas changing stimulus contrast affects primarily the relative strength of sensory drive and ongoing cortical activity. Consistent with this predicted difference, we found that correlation was affected by these stimulus manipulations in different ways. Synchrony was significantly stronger for orientations that drove both neurons well than for those that did not, but correlation on longer time scales was orientation independent. Reducing stimulus contrast resulted in a decrease in the temporal precision of synchronous firing and an enhancement of correlated response variability on longer time scales. Our results thus suggest that correlated responsivity arises from mechanisms operating at two distinct timescales: one that is orientation tuned and that determines the strength of temporally precise synchrony, and a second that is contrast sensitive, of low temporal frequency, and present in ongoing cortical activity.

Spatial and Temporal Scales of Neuronal Correlation in Primary Visual Cortex

The spiking activity of cortical neurons is correlated. For instance, trial-to-trial fluctuations in response strength are shared between neurons, and spikes often occur synchronously. Understanding the properties and mechanisms that generate these forms of correlation is critical for determining their role in cortical processing. We therefore investigated the spatial extent and functional specificity of correlated spontaneous and evoked activity. Because feedforward, recurrent, and feedback pathways have distinct extents and specificity, we reasoned that these measurements could elucidate the contribution of each type of input. We recorded single unit activity with microelectrode arrays which allowed us to measure correlation in many hundreds of pairings, across a large range of spatial scales. Our data show that correlated evoked activity is generated by two mechanisms that link neurons with similar orientation preferences on different spatial scales: one with high temporal precision and a limited spatial extent (∼3 mm), and a second that gives rise to correlation on a slow time scale and extends as far as we were able to measure (10 mm). The former is consistent with common input provided by horizontal connections; the latter likely involves feedback from extrastriate cortex. Spontaneous activity was correlated over a similar spatial extent, but approximately twice as strongly as evoked activity. Visual stimuli thus caused a substantial decrease in correlation, particularly at response onset. These properties and the circuit mechanism they imply provide new constraints on the functional role that correlation may play in visual processing.

Neuronal Adaptation to Visual Motion in Area MT of the Macaque

The responsivity of primary sensory cortical neurons is reduced following prolonged adaptation, but such adaptation has been little studied in higher sensory areas. Adaptation to visual motion has strong perceptual effects, so we studied the effect of prolonged stimulation on neuronal responsivity in the macaques area MT, a cortical area whose importance to visual motion perception is well established. We adapted MT neurons with sinusoidal gratings drifting in the preferred or null direction. Preferred adaptation reduced the responsiveness of MT cells, primarily by changing their contrast gain, and this effect was spatially specific within the receptive field. Null adaptation reduced the ability of null gratings to inhibit the response to a simultaneously presented preferred stimulus. While both preferred and null adaptation alter MT responses, these effects probably do not occur in MT neurons but are likely to reflect adaptation-induced changes in contrast gain earlier in the visual pathway.

Decoding the activity of neuronal populations in macaque primary visual cortex

Visual function depends on the accuracy of signals carried by visual cortical neurons. Combining information across neurons should improve this accuracy because single neuron activity is variable. We examined the reliability of information inferred from populations of simultaneously recorded neurons in macaque primary visual cortex. We considered a decoding framework that computes the likelihood of visual stimuli from a pattern of population activity by linearly combining neuronal responses and tested this framework for orientation estimation and discrimination. We derived a simple parametric decoder assuming neuronal independence and a more sophisticated empirical decoder that learned the structure of the measured neuronal response distributions, including their correlated variability. The empirical decoder used the structure of these response distributions to perform better than its parametric variant, indicating that their structure contains critical information for sensory decoding. These results show how neuronal responses can best be used to inform perceptual decision-making.

Comparison of recordings from microelectrode arrays and single electrodes in the visual cortex

Advances in microelectrode neural recording systems have made it possible to record extracellular activity from a large number of neurons simultaneously. A substantial body of work is associated with traditional single-electrode extracellular recording, and the robustness of the recording method has

Questioning the role of rebound firing in the cerebellum

A key component of recent theories on cerebellar function is rebound firing in neurons of the deep cerebellar nuclei (DCN). Despite the robustness of this phenomenon in vitro, in vivo studies have provided little evidence for its prevalence. We found that intact mouse or rat DCN neurons rarely showed rebound firing under physiological conditions in vitro or in vivo. These observations necessitate a critical re-evaluation of recent cerebellar models.

Stimulus selectivity and spatial coherence of gamma components of the local field potential

The gamma frequencies of the local field potential (LFP) provide a physiological correlate for numerous perceptual and cognitive phenomena and have been proposed to play a role in cortical function. Understanding the spatial extent of gamma and its relationship to spiking activity is critical for interpreting this signal and elucidating its function, but previous studies have provided widely disparate views of these properties. We addressed these issues by simultaneously recording LFPs and spiking activity using microelectrode arrays implanted in the primary visual cortex of macaque monkeys. We find that the spatial extent of gamma and its relationship to local spiking activity is stimulus dependent. Small gratings, and those masked with noise, induce a broadband increase in spectral power. This signal is tuned similarly to spiking activity and has limited spatial coherence. Large gratings, however, induce a gamma rhythm characterized by a distinctive spectral “bump,” which is coherent across widely separated sites. This signal is well tuned, but its stimulus preference is similar across millimeters of cortex. The preference of this global gamma rhythm is sensitive to adaptation, in a manner consistent with its magnifying a bias in the neuronal representation of visual stimuli. Gamma thus arises from two sources that reflect different spatial scales of neural ensemble activity. Our results show that there is not a single, fixed ensemble contributing to gamma and that the selectivity of gamma cannot be used to infer its spatial extent.

Laminar dependence of neuronal correlations in visual cortex

Neuronal responses are correlated on a range of timescales. Correlations can affect population coding and may play an important role in cortical function. Correlations are known to depend on stimulus drive, behavioral context, and experience, but the mechanisms that determine their properties are poorly understood. Here we make use of the laminar organization of cortex, with its variations in sources of input, local circuit architecture, and neuronal properties, to test whether networks engaged in similar functions but with distinct properties generate different patterns of correlation. We find that slow timescale correlations are prominent in the superficial and deep layers of primary visual cortex (V1) of macaque monkeys, but near zero in the middle layers. Brief timescale correlation (synchrony), on the other hand, was slightly stronger in the middle layers of V1, although evident at most cortical depths. Laminar variations were also apparent in the power of the local field potential, with a complementary pattern for low frequency (<10 Hz) and gamma (30-50 Hz) power. Recordings in area V2 revealed a laminar dependence similar to V1 for synchrony, but slow timescale correlations were not different between the input layers and nearby locations. Our results reveal that cortical circuits in different laminae can generate remarkably different patterns of correlations, despite being tightly interconnected.