Afroz Alam

Dimensional analysis of osteoclastic bone resorption and the measurement of biologically active calcitonin

Calcitonin inhibits bone resorption through a direct action on the osteoclast. We report a quantitative analysis of bone resorption by disaggregated rat osteoclasts. We then used our findings to develop a formal bioassay for calcitonin. Osteoclasts were mechanically disaggregated from neonatal rat long bones and dispersed at low densities on slices of devitalized bovine cortical bone. The resulting areas of bone excavation were quantified to micrometric precision by scanning electron microscopy together with computer‐assisted image analysis. These findings were correlated with the volumes of bone resorption in the same slices measured by confocal scanning microscopy for the first time. The total planar areas of bone resorption per slice correlated linearly (r = 0.78) with the confocal microscopic measurements of total volume resorbed, provided that volume was expressed to its two‐thirds power. The latter transformation resulted in representations of the determined areas ([length]2) and volumes ([length]3) which were dimensionally consistent. These findings thus demonstrate that osteoclastic bone excavations show a consistent relationship between area and volume and that assessments of the area of excavations accordingly provide an empirical representation of the volume of bone resorbed. Furthermore, in view of the skewed nature of the distributions of area measurements, we assessed the effect of transforming the response variable to derive a metameter, (planar area of resorption)1/2. Such transformed data points, which expressed the data in the dimensions of [length], were more normally distributed than the raw data points and had more stable variances over a wider concentration range. We accordingly determined relative potencies using parallel line analyses on the transformed data. The latter offered a consistent correlation to the volume measurements when these were also converted to dimensions of [length] (r = 0.805). It was confirmed that the inhibition of bone resorption by calcitonins from various species, namely, pig, salmon and eel, was quantitatively dependent upon concentration of the respective peptides. The resulting assay was also found to be sufficiently sensitive to measure picomolar peptide concentrations with a precision, lambda (standard deviation/slope), ranging between 0.3 and 0.8. Finally, we identified factors affecting assay precision and sensitivity.

Inhibition of NF-κB translocation by curcumin analogs induces G0/G1 arrest and downregulates thymidylate synthase in colorectal cancer

Cell cycle progression and DNA synthesis are essential steps in cancer cell growth and resistance. Thymidylate synthase (TS) is a therapeutic target for 5FU. Curcumin is a potent inhibitor of NF-κB. EF31 and UBS109 are potent synthetic analogues of curcumin. We tested the hypothesis that inhibition of NF-κB translocation by curcumin and its analogs EF31 and UBS109 can inhibit cell cycle progression and downregulate TS levels in colorectal cancer (CRC) cell lines. Two CRC cell lines (HCT116 and HT-29) were either untreated (control) or treated with IC50 concentrations of curcumin, EF31 UBS109 led to G0/G1 cell cycle arrest. Treatment with curcumin, EF31 or UBS109 inhibited NF-κB, downregulated survival pathways and inhibited cell cycle progression. Arrest in the G0/G1 phase was associated with downregulation of the transcription factor E2F-1 and its target gene TS. NF-κB over-expression induced E2F-1 and TS protein and mRNA levels in both cell lines. EF31 and UBS109 treatment significantly decreased tumor growth in compared to untreated tumors. EF31 and UBS109 are promising agents for the prevention and treatment of CRC.

The role of adiponectin in obesity-associated female-specific carcinogenesis

Adipose tissue is a highly vascularized endocrine organ, and its secretion profiles may vary with obesity. Adiponectin is secreted by adipocytes that make up adipose tissue. Worldwide, obesity has been designated a serious health problem among women and is associated with a variety of metabolic disorders and an increased risk of developing cancer of the cervix, ovaries, uterus (uterine/endometrial), and breast. In this review, the potential link between obesity and female-specific malignancies is comprehensively presented by discussing significant features of the intriguing and complex molecule, adiponectin, with a focus on recent findings highlighting its molecular mechanism of action in female-specific carcinogenesis.

Aquaporins: Their role in gastrointestinal malignancies

Aquaporins (AQPs) are small (~30 kDa monomers) integral membrane water transport proteins that allow water to flow through cell membranes in reaction to osmotic gradients in cells. In mammals, the family of AQPs has thirteen (AQP0-12) unique members that mediate critical biological functions. Since AQPs can impact cell proliferation, migration and angiogenesis, their role in various human cancers is well established. Recently, AQPs have been explored as potential diagnostic and therapeutic targets in gastrointestinal (GI) cancers. GI cancers encompass multiple sites including the colon, esophagus, stomach and pancreas. Research in the last three decades has revealed biological aspects and signaling pathways critical for the development of GI cancers. Since the majority of these cancers are very aggressive and rapidly metastasizes, identifying effective targets is crucial for treatment. Preclinical studies have utilized inhibitors of specific AQPs and knock down of AQP expression using siRNA. Although several studies have explored the role of AQPs in colorectal, esophageal, gastric, hepatocellular and pancreatic cancers, there is no comprehensive review compiling the available information on GI cancers as has been published for other malignancies such as ovarian cancer. Due to the similarities and association of various sites of GI cancers, it is helpful to consider these results collectively in order to better understand the role of specific AQPs in critical GI cancers. This review summarizes the current knowledge of the role of AQPs in GI malignancies with particular focus on diagnosis and therapeutic applications.

Genistein: Its role in metabolic diseases and cancer

Genistein is an isoflavone present in soy and is known to have multiple molecular effects, such as the inhibition of inflammation, promotion of apoptosis, and modulation of steroidal hormone receptors and metabolic pathways. Since these molecular effects impact carcinogenesis, cancer propagation, obesity, osteoporosis, and metabolic syndromes, genistein plays an important role in preventing and treating common disorders. The role of genistein has not been adequately evaluated in all these clinical settings. This review summarizes some of the known molecular effects of genistein and its potential role in health maintenance and treatment.

Organic Farming History and Techniques

Organic farming involves holistic production systems that avoids the use of synthetic fertilizers, pesticides and genetically modified organisms, thereby minimizing their deleterious effect on environment. Agriculture area under organic farming ranges from 0.03% in India to 11.3% in Austria. Organic farming is beneficial for natural resources and the environment. Organic farming is a system that favors maximum use of organic materials and microbial fertilizers to improve soil health and to increase yield. Organic farming has a long history but show a recent and rapid rise. This article explains the development stages, techniques and status of organic farming worldwide. The sections are: the development and essential characteristics of organic farming; the basic concepts behind organic farming; historical background; developmental era of organic farming; methods of organic farming; relevance of organic farming in the Indian context; comparative account between organic farming and conventional farming; importance of organic farming in environmentally friendly approaches; working with natural cycles; relevance of organic crop production in food security; yield potential and trends of organic farming; rural economic linkage its scope and limitations; and legislation procedures adopted by various countries. Organisations and financial aspects of organic farming are briefly discussed.

Salicylic acid mediated growth, physiological and proteomic responses in two wheat varieties under drought stress

Salicylic acid (SA) induced drought tolerance can be a key trait for increasing and stabilizing wheat production. These SA induced traits were studied in two Triticum aestivum L. varieties; drought tolerant, Kundan and drought sensitive, Lok1 under two different water deficit regimes: and rehydration at vegetative and flowering stages. SA alleviated the negative effects of water stress on photosynthesis more in Kundan. SA induced defense responses against drought by increasing antioxidative enzymes and osmolytes (proline and total soluble sugars). Differential proteomics revealed major role of carbon metabolism and signal transduction in enhancing drought tolerance in Kundan which was shifted towards defense, energy production and protection in Lok1. Thioredoxins played important role between SA and redox signaling in activating defense responses. SA showed substantial impact on physiology and carbon assimilation in tolerant variety for better growth under drought. Lok1 exhibited SA induced drought tolerance through enhanced defense system and energy metabolism. Plants after rehydration showed complete recovery of physiological functions under SA treatment. SA mediated constitutive defense against water stress did not compromise yield. These results suggest that exogenously applied SA under drought stress confer growth promoting and stress priming effects on wheat plants thus alleviating yield limitation. BIOLOGICAL SIGNIFICANCE Studies have shown morphological, physiological and biochemical aspects associated with the SA mediated drought tolerance in wheat while understanding of molecular mechanism is limited. Herein, proteomics approach has identified significantly changed proteins and their potential relevance to SA mediated drought stress responses in drought tolerant and sensitive wheat varieties. SA regulates wide range of processes such as photosynthesis, carbon assimilation, protein metabolism, amino acid and energy metabolism, redox homeostasis and signal transduction under drought. Proteome response to SA during vegetative and reproductive growth gave an insight on mechanism related water stress acclimation for growth and development to attain potential yield under drought. The knowledge gained can be potentially applied to provide fundamental basis for new strategies aiming towards improved crop drought tolerance and productivity.

Adiponectin: Its role in obesity-associated colon and prostate cancers

Adipose tissue synthesizes many proteins and hormones collectively called adipokines, which are linked to a number of diseases, including cancer. Low levels of adiponectin are reported to be a risk factor for obesity-related cancers including colorectal and prostate cancers. Accordingly, obesity/lifestyle-related diseases, including certain cancers, may be treated by developing drugs that act specifically on adiponectin levels in circulation. Adiponectin may also serve as a clinical biomarker in obesity-related diseases. Adiponectin-based therapies are known to inhibit cancer advancement and thus may provide a therapeutic approach to delay cancer progression. Better understanding of the function of adiponectin is of great significance in the fight against cancer. This timely review is concentrated on the role of adiponectin and the impact of obesity on the development of cancers, especially colorectal and prostate cancers.

MicroRNAs as biomarkers and prospective therapeutic targets in colon and pancreatic cancers

Colon and pancreatic cancers have high mortality rates due to early metastasis prior to the onset of symptoms. Screening tests for colorectal cancer are invasive and expensive. No effective screening is available for pancreatic cancer. Identification of biomarkers for early detection in both of these cancers is being extensively researched. MicroRNAs (miRNA) are small non-coding molecule biomarkers that regulate cancers. Measurement of miRNAs in pancreatic fluid or blood could be a preferred non-invasive screening method. The regulation of colon and pancreatic cancers by miRNA is complex. miRNA play a central role in inflammation, invasiveness, and tumor progression in these two cancers, as well as regulation of the NF-κB pathway. miRNA’s evolving role in screening is also reviewed.

Proteomics unravel the regulating role of salicylic acid in soybean under yield limiting drought stress

Drought is a major concern for sustainable yield under changing environment. Soybean, an economically important oil and protein crop, is prone to drought resulting in yield instability. Salicylic acid (SA), a multifaceted growth hormone, modulates a series of parallel processes to confer drought tolerance thereby relieving yield limitations. The present study was performed in soybean plants treated with SA (0.5 mM) through seed pretreatment under drought regimes: severe stress (50% RWC) and moderate stress (75% RWC), and rehydration. Differential leaf proteome profiling with morphological, physiological and antioxidative metabolism studies were performed at two developmental stages (vegetative and flowering). This explained the tolerance attribution to soybean throughout the development attaining yield stability. Abundance of proteins involved in photosynthesis and ATP synthesis generated energy driving metabolic processes towards plant growth, development and stress acclimation. Carbon (C) metabolism proteins involved in growth, osmoregulation and C partition relieved drought-induced C impairment under SA. Defensive mechanisms against redox imbalance and protein misfolding and degradation under stress were enhanced as depicted by the abundance of proteins involved in redox balance and protein synthesis, assembly and degradation at vegetative stage. Redox signaling in chloroplast and its interplay with SA signaling triggered different defense responses as shown through thioredoxin protein abundance. Amino acid metabolism proteins abundance resulted in increased osmoprotectants accumulation like proline at initial stage which contributed later towards N (nitrogen) remobilization to developing sink. At later stage, abundance of these proteins maintained redox homeostasis and N remobilization for improved sink strength. The redox homeostasis was supported by the increased antioxidative metabolism in SA treated plants. The downregulation of proteins at flowering also contributed towards N remobilization. Yield potential was improved by SA under drought through acclimation with enhanced N and C remobilization to sink as demonstrated by increased yield parameters like seed number and weight per plant, thousand seed weight and harvest index. The potential of SA in conferring drought tolerance to plants to maintain sustainable yield possess future research interests.