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Dive into the research topics where Agnieszka Nowacka is active.

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Featured researches published by Agnieszka Nowacka.


Langmuir | 2010

Polarization Transfer Solid-State NMR for Studying Surfactant Phase Behavior

Agnieszka Nowacka; Parveen Choudhary Mohr; Jens Norrman; Rachel W. Martin; Daniel Topgaard

The phase behavior of amphiphiles, e.g., lipids and surfactants, at low water content is of great interest for many technical and pharmaceutical applications. When put in contact with air having a moderate relative humidity, amphiphiles often exhibit coexistence between solid and liquid crystalline phases, making their complete characterization difficult. This study describes a (13)C solid-state NMR technique for the investigation of amphiphile phase behavior in the water-poor regime. While the (13)C chemical shift is an indicator of molecular conformation, the (13)C signal intensities obtained with the CP and INEPT polarization transfer schemes yield information on molecular dynamics. A theoretical analysis incorporating the effect of molecular segment reorientation, with the correlation time τ(c) and order parameter S, shows that INEPT is most efficient for mobile segments with τ(c) < 0.01 μs and S < 0.05, while CP yields maximal signal for rigid segments with τ(c) > 10 μs and/or S > 0.5 under typical solid-state NMR experimental conditions. For liquid crystalline phases, where τ(c) < 0.01 μs and 0 < S < 0.3, the observed CP and INEPT intensities serve as a gauge of S. The combination of information on molecular conformation and dynamics permits facile phase diagram determination for systems with solid crystalline, solid amorphous, anisotropic liquid crystalline, and isotropic liquid (crystalline) phases as demonstrated by experiments on a series of reference systems with known phase structure. Three solid phases (anhydrous crystal, dihydrate, gel), two anisotropic liquid crystalline phases (normal hexagonal, lamellar), and two isotropic liquid crystalline phases (micellar cubic, bicontinuous cubic) are identified in the temperature-composition phase diagram of the cetyltrimethylammonium succinate/water system. Replacing the succinate counterion with DNA prevents the formation of phases other than hexagonal and leads to a general increase of τ(c).


PLOS ONE | 2013

Membrane Lipid Co-Aggregation with α-Synuclein Fibrils

Erik Hellstrand; Agnieszka Nowacka; Daniel Topgaard; Sara Linse; Emma Sparr

Amyloid deposits from several human diseases have been found to contain membrane lipids. Co-aggregation of lipids and amyloid proteins in amyloid aggregates, and the related extraction of lipids from cellular membranes, can influence structure and function in both the membrane and the formed amyloid deposit. Co-aggregation can therefore have important implications for the pathological consequences of amyloid formation. Still, very little is known about the mechanism behind co-aggregation and molecular structure in the formed aggregates. To address this, we study in vitro co-aggregation by incubating phospholipid model membranes with the Parkinson’s disease-associated protein, α-synuclein, in monomeric form. After aggregation, we find spontaneous uptake of phospholipids from anionic model membranes into the amyloid fibrils. Phospholipid quantification, polarization transfer solid-state NMR and cryo-TEM together reveal co-aggregation of phospholipids and α-synuclein in a saturable manner with a strong dependence on lipid composition. At low lipid to protein ratios, there is a close association of phospholipids to the fibril structure, which is apparent from reduced phospholipid mobility and morphological changes in fibril bundling. At higher lipid to protein ratios, additional vesicles adsorb along the fibrils. While interactions between lipids and amyloid-protein are generally discussed within the perspective of different protein species adsorbing to and perturbing the lipid membrane, the current work reveals amyloid formation in the presence of lipids as a co-aggregation process. The interaction leads to the formation of lipid-protein co-aggregates with distinct structure, dynamics and morphology compared to assemblies formed by either lipid or protein alone.


Soft Matter | 2012

Small polar molecules like glycerol and urea can preserve the fluidity of lipid bilayers under dry conditions

Agnieszka Nowacka; S. Douezan; Lars Wadsö; Daniel Topgaard; Emma Sparr

Glycerol and urea are examples of small, water-soluble molecules with low vapor pressure that can protect lipid membranes upon dehydration. Both are a part of the Natural Moisturizing Factor in human skin, and are also present in other organisms, where they prevent drying due to osmotic stress. This study was conducted in order to understand the mechanism of such protection. We have selected two ternary systems: dimyristoylphosphatidylcholine (DMPC)–glycerol–water and DMPC–urea–water, as models to investigate the molecular mechanisms behind this protective effect with a focus on factors that control the solid to liquid phase transition in the phospholipid bilayers. By combining a number of experimental techniques, including solid-state NMR, sorption microbalance and DSC, the structure and the phase transitions have been characterized at low water content and in excess solution. It was discovered that both glycerol and urea stabilize the liquid crystalline bilayers at low relative humidities (down to 75% RH at 27 °C), whereas for the pure DMPC–water system, a solid gel phase is induced at 93% RH. This demonstrates the protective effect of glycerol and urea against osmotic stress. It is further concluded that for lipid systems with limited access to solvent, the phase behavior is determined by solvent volume, irrespective of the composition. The observation that glycerol and urea have a similar effect on the lipid phase behavior under dry conditions, together with the lack of evidence of specific interactions between the lipids and glycerol or urea, implies a general mechanism, which might also be applicable to other, similar solutes.


PLOS ONE | 2013

Characterization of Stratum Corneum Molecular Dynamics by Natural-Abundance 13C Solid-State NMR

Sebastian Björklund; Agnieszka Nowacka; Joke A. Bouwstra; Emma Sparr; Daniel Topgaard

Despite the enormous potential for pharmaceutical applications, there is still a lack of understanding of the molecular details that can contribute to increased permeability of the stratum corneum (SC). To investigate the influence of hydration and heating on the SC, we record the natural-abundance 13C signal of SC using polarization transfer solid-state NMR methods. Resonance lines from all major SC components are assigned. Comparison of the signal intensities obtained with the INEPT and CP pulse sequences gives information on the molecular dynamics of SC components. The majority of the lipids are rigid at 32°C, and those lipids co-exist with a small pool of mobile lipids. The ratio between mobile and rigid lipids increases with hydration. An abrupt change of keratin filament dynamics occurs at RH = 80–85%, from completely rigid to a structure with rigid backbone and mobile protruding terminals. Heating has a strong effect on the lipid mobility, but only a weak influence on the keratin filaments. The results provide novel molecular insight into how the SC constituents are affected by hydration and heating, and improve the understanding of enhanced SC permeability, which is associated with elevated temperatures and SC hydration.


Soft Matter | 2014

Stratum corneum molecular mobility in the presence of natural moisturizers

Sebastian Björklund; Jenny Andersson; Quoc Dat Pham; Agnieszka Nowacka; Daniel Topgaard; Emma Sparr

The outermost layer of the skin, the stratum corneum (SC), is a lipid-protein membrane that experiences considerable osmotic stress from a dry and cold climate. The natural moisturizing factor (NMF) comprises small and polar substances, which like osmolytes can protect living systems from osmotic stress. NMF is commonly claimed to increase the water content in the SC and thereby protect the skin from dryness. In this work we challenge this proposed mechanism, and explore the influence of NMF on the lipid and protein components in the SC. We employ natural-abundance (13)C solid-state NMR methods to investigate how the SC molecular components are influenced by urea, glycerol, pyrrolidone carboxylic acid (PCA), and urocanic acid (UCA), all of which are naturally present in the SC as NMF compounds. Experiments are performed with intact SC, isolated corneocytes and model lipids. The combination of NMR experiments provides molecularly resolved qualitative information on the dynamics of different SC lipid and protein components. We obtain completely novel molecular information on the interaction of these NMF compounds with the SC lipids and proteins. We show that urea and glycerol, which are also common ingredients in skin care products, increase the molecular mobility of both SC lipids and proteins at moderate relative humidity where the SC components are considerably more rigid in the absence of these compounds. This effect cannot be attributed to increased SC water content. PCA has no detectable effect on SC molecular mobility under the conditions investigated. It is finally shown that the more apolar compound, UCA, specifically influences the mobility of the SC lipid regions. The present results show that the NMF components act to retain the fluidity of the SC molecular components under dehydrating conditions in such a way that the SC properties remain largely unchanged as compared to more hydrated SC. These findings provide a new molecular insight into how small polar molecules in NMF and skin care products act to protect the human skin from drying.


PLOS ONE | 2018

Serum VEGF-A concentrations in patients with central nervous system (CNS) tumors

Agnieszka Nowacka; Wojciech Smuczyński; Danuta Rość; Kamila Woźniak—Dąbrowska; Maciej Śniegocki

Angiogenesis plays an essential role in tumors development. In case of central nervous system tumors, the most important role in this process plays VEGF-A. The purpose of this study was to determine the plasma concentration of this agent in patients treated surgically because of intracranial tumors. The study involved 48 adult patients, both sexes, treated surgically because of a brain tumor. The control group consisted of 50 adult volunteers of both sexes, without cancer diagnosis. Based on the studies, it was found that serum VEGF-A levels before surgery are higher in patients with central nervous system tumors (10.39–150.57 pg/ml, median 41.70 pg/ml) than in non-cancer patients (0.00–130.77 pg/ml, median 22.56 pg/ml). The association between serum VEGF-A level and malignancy and histological type of intracranial tumor has not beed confirmed. The highest average preoperative serum VEGF-A level was found in patients with low grade gliomas, slightly lower (close to each other) in those with high grade gliomas and meningiomas, while the lowest level was characteristic for metastatic tumors. High variation in results was observed in patients with low grade gliomas (52.56 pg/ml)—higher than those reported in patients with high grade gliomas (32.38 pg/ml). In the rest types of tumors the differentiation was similar and oscillated within 23.08–27.50 pg/ml.


Clinical Practice (Therapy) | 2018

Subdural empyema as a complication of acute otitis media in a 67-year-old patient

Maciej Sniegocki; Agnieszka Nowacka; Dawid Lewko; Wojciech Smuczyński; Kamila Wożniak; Wojciech Kazmierczak; Katarzyna Pawlak-Osinska

The acute otitis media can be caused by viruses (nonsuppurative inflammation) and bacteria (suppurative inflammation). The suppurative inflammation is a risk factor of endocranial complications, including subdural empyema burdened with the high mortality. The authors present a clinical case of 67-year-old man treated by surgery because of subdural empyema in the course of the acute suppurative otitis media.


MAGNETIC RESONANCE IN POROUS MEDIA: Proceedings of the 9th International Bologna#N#Conference on Magnetic Resonance in Porous Media (MRPM9), including 8th Colloquium on#N#Mobile Magnetic Resonance (CMMR8) | 2008

Molecular Exchange between Intra‐ and Extracellular Compartments in a Cell Suspension

Ingrid Åslund; Agnieszka Nowacka; Markus Nilsson; Daniel Topgaard

In this work we present a PFG‐SE technique to obtain the a characteristic time for molecular exchange between domains with slow diffusion and domains with fast diffusion. The method has been demonstrated by measuring the change of exchange time with temperature for a sedimented yeast cell suspension. Compared to previous methods the new protocol is more sensitive to exchange and as few as 40 data points are needed. The experimental time needed is thus a couple of minutes.


Journal of Magnetic Resonance | 2009

Filter-exchange PGSE NMR determination of cell membrane permeability.

Ingrid Åslund; Agnieszka Nowacka; Markus Nilsson; Daniel Topgaard


Journal of Magnetic Resonance | 2013

Signal intensities in (1)H-(13)C CP and INEPT MAS NMR of liquid crystals.

Agnieszka Nowacka; Nils Bongartz; O H S Ollila; Tommy Nylander; Daniel Topgaard

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Wojciech Smuczyński

Nicolaus Copernicus University in Toruń

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