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Featured researches published by Ahmet Ulu.


Bioconjugate Chemistry | 2017

Immobilization of l-Asparaginase on Carrier Materials: A Comprehensive Review

Ahmet Ulu; Burhan Ates

There are two major applications of l-asparaginase (L-ASNase): leukemia therapy and the food industry. Especially, its chemotherapeutic effect has attracted interest from the scientific community and individual scientists. Therefore, to protect the intrinsic activity and half-time of L-ASNase, several carriers and immobilization techniques for immobilization of L-ASNase have been described in articles. Unfortunately, a comprehensive review about immobilization of L-ASNase has not been written until now. In this review, we have thoroughly discussed the carriers for L-ASNase by illustrating immobilization findings including both past and present applications. In addition, we have revealed advantages and disadvantages of immobilized enzyme and related it to free form. We believe that this review will not only provide background information, but also guide future developments.


Carbohydrate Polymers | 2016

Design of starch functionalized biodegradable P(MAA-co-MMA) as carrier matrix for l-asparaginase immobilization

Ahmet Ulu; Süleyman Köytepe; Burhan Ates

We prepared biodegradable P(MAA-co-MMA)-starch composite as carrier matrix for the immobilization of l-asparaginase (l-ASNase), an important chemotherapeutic agent in acute lymphoblastic leukemia. Chemical characteristics and thermal stability of the prepared composites were determined by FT-IR, TGA, DTA and, DSC, respectively. Also, biodegradability measurements of P(MAA-co-MMA)-starch composites were carried out to examine the effects of degradation of the starch. Then, l-ASNase was immobilized on the P(MAA-co-MMA)-starch composites. The surface morphology of the composite before and after immobilization was characterized by SEM, EDX, and AFM. The properties of the immobilized l-ASNase were investigated and compared with the free enzyme. The immobilized l-ASNase had better showed thermal and pH stability, and remained stable after 30days of storage at 25°C. Thus, based on the findings of the present work, the P(MAA-co-MMA)-starch composite can be exploited as the biocompatible matrix used for l-ASNase immobilization for medical applications due to biocompatibility and biodegradability.


International Journal of Biological Macromolecules | 2018

Design of epoxy-functionalized Fe 3 O 4 @MCM-41 core–shell nanoparticles for enzyme immobilization

Ahmet Ulu; Imren Ozcan; Süleyman Köytepe; Burhan Ates

The scope of our research was to prepare the organosilane-modified Fe3O4@MCM-41 core-shell magnetic nanoparticles, used for L-ASNase immobilization and explored screening of immobilization conditions such as pH, temperature, thermal stability, kinetic parameters, reusability and storage stability. In this content, Fe3O4 core-shell magnetic nanoparticles were prepared via co-precipitation method and coated with MCM-41. Then, Fe3O4@MCM-41 magnetic nanoparticles were functionalized by (3-glycidyloxypropyl) trimethoxysilane (GPTMS) as an organosilane compound. Subsequently, L-ASNase was covalently immobilized on epoxy-functionalized Fe3O4@MCM-41 magnetic nanoparticles. The immobilized L-ASNase had greater activity at high pH and temperature values. It also maintained >92% of the initial activity after incubation at 55 °C for 3 h. Regarding kinetic values, immobilized L-ASNase showed a higher Vmax and lower Km compared to native L-ASNase. In addition, it displayed excellent reusability for 12 successive cycles. After 30 days of storage at 4 °C and 25 °C, immobilized L-ASNase retained 54% and 26% of its initial activities while native L-ASNase lost about 68% and 84% of its initial activity, respectively. As a result, the immobilization of L-ASNase onto magnetic nanoparticles may provide an advantage in terms of removal of L-ASNase from reaction media.


Environmental Toxicology and Pharmacology | 2018

The in vitro toxicity analysis of titanium dioxide (TiO 2 ) nanoparticles on kinematics and biochemical quality of rainbow trout sperm cells

Mustafa Erkan Özgür; Sevgi Balcıoğlu; Ahmet Ulu; Imren Ozcan; Fatih Okumuş; Süleyman Köytepe; Burhan Ates

In recent years, titanium dioxide (TiO2) nanoparticles (NPs) as metal oxide nanoparticles are widely used in industry, agriculture, personal care products, cosmetics, sun protection and toothpaste, electronics, foodstuffs and food packaging. This use of nano-TiO2 has been associated with environmental toxicity concerns. Therefore, the aim of this study was to evaluate the in vitro effect of different doses of TiO2 NPs (∼30-40 nm) (0.01, 0.1, 0.5, 1, 10 and 50 mg/L) at 4oC for 3 h on the sperm cell kinematics as velocities of Rainbow trout (Oncorhynchus mykiss, Walbaum, 1792) sperm cells. Furthermore, oxidative stress markers (total glutathione (TGSH) and superoxide dismutase (SOD) were assessed in sperm cells after exposure to TiO2 NPs. According to the obtained results, there were statistically significant (P < 0.05) decreasing in the velocities of sperm cells after 10 mg/L TiO2 NPs and an increase the activity of SOD (P < 0.05) and TGSH levels were determined.


Artificial Cells Nanomedicine and Biotechnology | 2018

Magnetic Fe3O4@MCM-41 core–shell nanoparticles functionalized with thiol silane for efficient l-asparaginase immobilization

Ahmet Ulu; Samir Abbas Ali Noma; Süleyman Köytepe; Burhan Ates

Abstract l-Asparaginase (l-ASNase) is a vital enzyme for medical treatment and food industry. Here, we assessed the use of Fe3O4@Mobil Composition of Matter No. 41 (MCM-41) magnetic nanoparticles as carrier matrix for l-ASNase immobilization. In addition, surface of Fe3O4@MCM-41 magnetic nanoparticles was functionalized with 3-mercaptopropyltrimethoxysilane (MPTMS) to enhance stability of l-ASNase. The chemical structure, thermal properties, magnetic profile and morphology of the thiol-functionalized Fe3O4@MCM-41 magnetic nanoparticles were characterized with Fourier transform infrared spectroscopy (FTIR), thermogravimetric analysis (TGA), differential thermal analysis (DTA), differential scanning calorimetry (DSC), vibrating sample magnetometer (VSM), scanning electron microscope (SEM), energy dispersive X-ray (EDX) spectroscopy and zeta-potential measurement. l-ASNase was covalently immobilized onto the thiol-functionalized Fe3O4@MCM-41 magnetic nanoparticles. The properties of the immobilized enzyme, including optimum pH, temperature, kinetic parameters, thermal stability, reusability and storage stability were investigated and compared to free one. Immobilized enzyme was found to be stable over a wide range of pH and temperature range than free enzyme. The immobilized l-ASNase also showed higher thermal stability after 180 min incubation at 50 °C. The immobilized enzyme still retained 63% of its original activity after 16 times of reuse. The Km value for the immobilized enzyme was 1.15-fold lower than the free enzyme, which indicates increased affinity for the substrate. Additionally, the immobilized enzyme was active over 65% and 53% after 30 days of storage at 4 °C and room temperature (∼25 °C), respectively. Thereby, the results confirmed that thiol-functionalized Fe3O4@MCM-41 magnetic nanoparticles had high efficiency for l-ASNase immobilization and improved stability of L-ASNase.


Toxics | 2018

The Toxicity Assessment of Iron Oxide (Fe3O4) Nanoparticles on Physical and Biochemical Quality of Rainbow Trout Spermatozoon

Mustafa Erkan Özgür; Ahmet Ulu; Sevgi Balcıoğlu; Imren Ozcan; Süleyman Köytepe; Burhan Ates

The aim of this study was to evaluate the in vitro effect of different doses (50, 100, 200, 400, and 800 mg/L) of Fe3O4 nanoparticles (NPs) at 4 °C for 24 h on the kinematics of rainbow trout (Oncorhynchus mykiss, Walbaum, 1792) spermatozoon. Firstly, Fe3O4 NPs were prepared at about 30 nm from Iron (III) chloride, Iron (II) chloride, and NH3 via a co-precipitation synthesis technique. Then, the prepared Fe3O4 NPs were characterized by different instrumental techniques for their chemical structure, purity, morphology, surface properties, and thermal behavior. The size, microstructure, and morphology of the prepared Fe3O4 NPs were studied by Fourier transform infrared spectroscopy (FTIR), X-ray diffraction (XRD) spectroscopy, and scanning electron microscopy (SEM) equipped with an energy-dispersive X-ray spectrometer (EDS). The thermal properties of the Fe3O4 NPs were determined with thermogravimetric analysis (TGA), differential thermal analysis (DTA), and differential scanning calorimeter (DSC) analysis techniques. According to our results, there were statistically significant (p < 0.05) decreases in the velocities of spermatozoon after treatment with 400 mg/L Fe3O4 NPs. The superoxide dismutase (SOD) and catalase (CAT) activities were significant (p < 0.05) decrease after 100 mg/L in after exposure to Fe3O4 NPs in 24 h. As the doses of Fe3O4 NPs increases, the level of malondialdehyde (MDA) and total glutathione (tGSH) significantly (p < 0.05) increased at doses of 400 and 800 mg/L.


RSC Advances | 2018

Magnetic-propelled Fe3O4–chitosan carriers enhance L-asparaginase catalytic activity: a promising strategy for enzyme immobilization

Burhan Ates; Ahmet Ulu; Süleyman Köytepe; Samir Abbas Ali Noma; V.S. Kolat; T. Izgi

Magnetic-propelled carriers comprising magnetic Fe3O4–chitosan nanoparticles were immobilized with L-asparaginase (L-ASNase). The enzyme displayed enhanced catalytic activity in a weak magnetic field, and thermal and pH stabilities. The conjugated L-ASNase presented higher thermostability and wider range of pH stability in comparison with those of free L-ASNase. Moreover, the reusability of conjugated L-ASNase significantly improved after immobilization and it retained 60.5% of its initial activity after undergoing 16 cycles. The conjugated L-ASNase maintained more than 50% and 48% initial activity after 4 weeks of storage at 4 °C and room temperature, respectively. Furthermore, we reveal that the activity of conjugated L-ASNase onto magnetic Fe3O4–chitosan particles increased by about 3-fold in the weak magnetic field at certain frequencies and flux density compared with that of free L-ASNase. Considering these excellent attributes, the magnetic-propelled mechanism in the transporting and activation of L-ASNase can be used by enhancing the catalytic activity, stability, and efficiency in vital implications for medicinal biotechnology.


Hybrid Polymer Composite Materials#R##N#Applications | 2017

Biomedical applications of hybrid polymer composite materials

Burhan Ates; Süleyman Köytepe; Sevgi Balcıoğlu; Ahmet Ulu; Canbolat Gürses

Abstract Hybrid materials are composites consisting of organic and inorganic species connected each other with physical and chemical interactions at the nanometer or molecular level. In hybrid polymer composite materials, interactions of components in microscale dimensions lead to a more homogeneous material that either shows characteristics in between the two original phases or even superior properties. Especially for biomedical fields, single polymeric materials are difficult to meet all the requirements due to various disadvantages. Thus, in order to overcome the limited biological performance of inorganic structures and to enhance the mechanical characteristics of organic structures, hybrid polymers have been paid a lot attention recently. Studies on biomedical applications of hybrid polymers focus on bone-tissue regeneration, biological/injectable scaffolds, implants, biosensors, drug delivery, biomimetic, and mechanically demanding tissue engineering applications. Therefore, this chapter is consisting of detailed discussion of advantages and disadvantages of biomedical applications of hybrid polymer composite materials.


Polymer Bulletin | 2016

Synthesis and characterization of biodegradable pHEMA-starch composites for immobilization of L-asparaginase

Ahmet Ulu; Süleyman Köytepe; Burhan Ates


Journal of Applied Polymer Science | 2016

Synthesis and characterization of PMMA composites activated with starch for immobilization of L-asparaginase

Ahmet Ulu; Süleyman Köytepe; Burhan Ates

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