Aino Nevalainen

Diversity and seasonal dynamics of bacterial community in indoor environment

BackgroundWe spend most of our lives in indoor environments and are exposed to microbes present in these environments. Hence, knowledge about this exposure is important for understanding how it impacts on human health. However, the bacterial flora in indoor environments has been only fragmentarily explored and mostly using culture methods. The application of molecular methods previously utilised in other environments has resulted in a substantial increase in our awareness of microbial diversity.ResultsThe composition and dynamics of indoor dust bacterial flora were investigated in two buildings over a period of one year. Four samples were taken in each building, corresponding to the four seasons, and 16S rDNA libraries were constructed. A total of 893 clones were analysed and 283 distinct operational taxonomic units (OTUs) detected among them using 97% sequence similarity as the criterion. All libraries were dominated by Gram-positive sequences, with the most abundant phylum being Firmicutes. Four OTUs having high similarity to Corynebacterium-, Propionibacterium-, Streptococcus- and Staphylococcus- sequences were present in all samples. The most abundant of the Gram-negative OTUs were members of the family Sphingomonadaceae, followed by Oxalobacteraceae, Comamonadaceae, Neisseriaceae and Rhizobiaceae.The relative abundance of alpha- and betaproteobacteria increased slightly towards summer at the expense of firmicutes. The proportion of firmicutes and gammaproteobacteria of the total diversity was highest in winter and that of actinobacteria, alpha- and betaproteobacteria in spring or summer, whereas the diversity of bacteroidetes peaked in fall. A statistical comparison of the libraries revealed that the bacterial flora of the two buildings differed during all seasons except spring, but differences between seasons within one building were not that clear, indicating that differences between the buildings were greater than the differences between seasons.ConclusionThis work demonstrated that the bacterial flora of indoor dust is complex and dominated by Gram-positive species. The dominant phylotypes most probably originated from users of the building. Seasonal variation was observed as proportional changes of the phyla and at the species level. The microflora of the two buildings investigated differed statistically and differences between the buildings were more pronounced than differences between seasons.

Fungi and actinobacteria in moisture-damaged building materials — concentrations and diversity

Abstract Modern building materials, once moistened, may provide ecological niches for various microbes that have not been well characterized. The aim of the current study was to determine whether fungal genera and actinobacteria were associated with seven types of moisture-damaged building materials by systematically describing the mycobiota and enumerating fungi and bacteria in these materials. Microbial analyses were obtained from 1140 visibly damaged samples of building material, viz. wood, paper, non-wooden building boards, ceramic products, mineral insulation materials, paints and glues, and plastics. Fungal and bacterial concentrations correlated well ( r =0.6). The range of fungi and bacteria numbers was between 10 0 and 10 8 cfu g −1 in all materials, but significant differences in counts were observed between materials. Highest median concentrations of fungi were observed in wooden and paper materials, and lowest in samples of mineral insulation, ceramic products, and paints and glues. Concentrations of viable bacteria in mineral insulation materials were significantly lower than in wood, paper, ceramic products and plastics. A rich variety of fungi was found in wooden materials, with Penicillium and yeasts occurring most frequently. In paper materials, a clear difference from wood was the more frequent occurrence of Cladosporium and Stachybotrys. The most distinctive finding in gypsum boards was that Stachybotrys was common. Ceramic products and paints and glues seemed to favour Acremonium and Aspergillus versicolor . Yeasts and members of the Sphaeropsidales occurred often in parallel in most materials. This study confirms that microbial growth occurs in many different building materials and shows associations between fungal genera and the type of material.

Analysis of Fungal Flora in Indoor Dust by Ribosomal DNA Sequence Analysis, Quantitative PCR, and Culture

ABSTRACT In recent years increasing attention has been given to the potential health effects of fungal exposure in indoor environments. We used large-scale sequencing of the fungal internal transcribed spacer region (ITS) of nuclear ribosomal DNA to describe the mycoflora of two office buildings over the four seasons. DNA sequencing was complemented by cultivation, ergosterol determination, and quantitative PCR analyses. Sequences of 1,339 clones were clustered into 394 nonredundant fungal operational taxonomical units containing sequences from 18 fungal subclasses. The observed flora differed markedly from that recovered by cultivation, the major differences being the near absence of several typical indoor mold genera such as Penicillium and Aspergillus spp. and a high prevalence of basidiomycetes in clone libraries. A total of 55% of the total diversity constituted of unidentifiable ITS sequences, some of which may represent novel fungal species. Dominant species were Cladosporium cladosporioides and C. herbarum, Cryptococcus victoriae, Leptosphaerulina americana and L. chartarum, Aureobasidium pullulans, Thekopsora areolata, Phaeococcomyces nigricans, Macrophoma sp., and several Malassezia species. Seasonal differences were observed for community composition, with ascomycetous molds and basidiomycetous yeasts predominating in the winter and spring and Agaricomycetidae basidiomycetes predominating in the fall. The comparison of methods suggested that the cloning, cultivation, and quantitative PCR methods complemented each other, generating a more comprehensive picture of fungal flora than any of the methods would give alone. The current restrictions of the methods are discussed.

Home dampness, moulds and their influence on respiratory infections and symptoms in adults in Finland

The aim of this study was to analyse the prevalence of mouldy homes and their association with respiratory symptoms and diseases in a subarctic climate. A questionnaire was mailed to a random sample of 2,000 males and females, aged 25-64 yrs, living in the county of Kuopio, Finland. A total of 1,521 (76%) responded and 1,460 were selected for the final analysis. The prevalence of homes with visible mould was 4%; with the odour of mould 5%; with damp spots, visible mould or the odour of mould 15%; and with moisture/ water damage, damp spots, visible mould or the odour of mould 23%. The number of reports of bronchitis, common cold, atopy, allergic rhinitis, rhinitis, fever and chills, hoarseness, fatigue, difficulties in concentration, lumbar backache and stomach ache were strongly associated with living in a damp home. Bronchitis, hoarseness and difficulties in concentration had the strongest associations, with adjusted odds ratios (95% confidence limits) of: 2.04 (1.49-2.78), 2.23 (1.37-3.63) and 2.17 (1.35-3.50), respectively. After controlling for a possible reporting bias by excluding those subjects reporting lumbar backache and recurrent stomach pain, eye irritation and tiredness remained significant. In conclusion, living in a home with mould problems may increase the risk of respiratory infections and symptoms in adults.

Performance of bioaerosol samplers: collection characteristics and sampler design considerations

Abstract The performances of various bioaerosol samplers have previously been compared in different field settings. The results are contradictory because of the arbitrarily chosen samplers, detection methods and sampling environments. In this paper, bioaerosol samplers are analyzed as to their operating principles and the different elements of the bioaerosol sampling process. The concepts of stopping distance as an estimate of sampler cut-off size, particle surface density on the collection surface and an example sampling time are introduced. Several presently available samplers are evaluated as to their collection characteristics and calculated optimal sampling times.

Moisture damage and childhood asthma - a population-based incident case-control study

Most previous studies on the association between moisture damage and asthma have been cross-sectional and relied on self-reported exposure and health. The present authors studied the association by carrying out careful home inspections among new, clinically determined cases of asthma and controls. New cases of asthma aged 12–84 months (n = 121) were recruited prospectively and matched for year of birth, sex and living area with two randomly selected population controls (n = 241). Trained engineers visited all homes. Both cases and controls had lived ≥75% of their lifetime or the past 2 yrs in their current home. Risk of asthma increased with severity of moisture damage and presence of visible mould in the main living quarters but not in other areas of the house. Cases more often had damage in their bedroom. Associations were comparable for atopic and nonatopic asthma and for children aged >30 months or ≤30 months. The present results, using standardised assessment of exposure and asthma, suggest that moisture damage and mould growth in the main living quarters are associated with the development of asthma in early childhood.

The relationship between moisture or mould observations in houses and the state of health of their occupants

This work was conducted in order to study how the health of adults is affected by the presence of moisture or mould in the home. A random sample of 310 houses in Finland was studied during the years 1993-1994. The houses were investigated for visual signs of moisture by a surveyor, and observations of mould were reported by the occupants. A moisture problem was observed in 52% and a mould problem in 27% of the houses. Health data was collected by means of a postal questionnaire from 699 adults. Exposure to moisture was significantly associated with sinusitis, acute bronchitis, nocturnal cough, nocturnal dyspnoea and sore throat, and the exposed inhabitants had significantly more episodes of common cold and tonsillitis. Exposure to mould was significantly associated with common cold, cough without phlegm, nocturnal cough, sore throat, rhinitis, fatigue and difficulties in concentration. Building-related moisture or mould increased the risk of upper and lower respiratory infections and symptoms as well as of nonrespiratory symptoms.

The indoor air quality in finnish homes with mold problems

Abstract A survey about mold problems in Finnish homes was made. Of the 135 reported cases 30 homes were chosen for bioaerosol measurements. Indoor and outdoor air fungal spores and bacteria were sampled in the spring and fall. Corresponding data, gathered from 18 reference homes sampled in the spring, were used as reference material. The range of the fungal spore levels was 10–2300 colony-forming units/m 3 (cfu/m 3 ) in moldy homes and 165–850 cfu/m 3 in the reference homes. The mean indoor/outdoor ratio of fungal spores in moldy homes was 4.2 vs. 0.6 in the reference homes. Mesophilic actinomycetes were found in moldy homes but not in the reference homes. No thermophilic actinomycetes were found in moldy or reference homes. In seven complaint sites the total bacteri levels were exceedingly high, 4500–12200 cfu/m 3 , which probably resulted from poor ventilation.

Personal exposures and microenvironmental concentrations of particles and bioaerosols

The aim of this study was to compare the personal exposure to particles and bioaerosols with that measured by stationary samplers in the main microenvironments, i.e., the home and the workplace. A random sample of 81 elementary school teachers was selected from the 823 teachers working for two councils in eastern Finland for the winter time measurement period. Bioaerosol and other particles were collected on filters by button samplers using personal sampling and microenvironmental measurements in homes and workplaces. The 24-hour sampling period was repeated twice for each teacher. Particle mass, absorption coefficient of the filter and the concentration of viable and total microorganisms were analyzed from each filter. In this paper, the study design, quality assurance principles and results of particle and bioaerosol exposure are described. The results show that particle mass concentrations, absorption coefficient and fungi were higher in personal exposure samples than in home and workplace samples. Furthermore, these concentrations were usually lower in the home than in the workplace. Bacterial concentrations were highest in heavily populated workplaces, while the viable fungi concentrations were lowest in workplaces. The fungi and bacteria results showed high variation, which emphasises the importance of quality assurance (duplicates and field blanks) in the microbial field measurements. Our results indicate that personal exposure measurements of bioaerosols in indoor environments are feasible and supplement the information obtained by stationary samplers.

Prevalence of moisture problems in Finnish houses

Abstract A random sample of 450 houses representing various decades was surveyed by trained civil engineers for signs of water leaks or condensation. In 80% of the houses, signs of current or previous moisture fault were observed. In most houses, the surveyors made at least two separate observations of moisture but the occupants missed one in every two of these signs of moisture damage. Part of the faults were caused by flaws in design or construction, and part were due to aging of materials. Approximately 55% of the Finnish houses (i.e., a total of nearly 500 000 houses), were assessed to be in need of repair or more thorough inspection. The observations were equally frequent in the houses of different age, but certain types of moisture damage were characteristic of certain types of buildings or constructional methods used in different eras. Roof geometry was a significant factor accounting for roof leakages. The majority of the faults could be repaired at reasonable cost.