Alan E. Lindsay
University of Notre Dame
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Publication
Featured researches published by Alan E. Lindsay.
Multiscale Modeling & Simulation | 2017
Alan E. Lindsay; Andrew J. Bernoff; Michael J. Ward
We study the first passage time problem for a diffusing molecule in an enclosed region to hit a small spherical target whose surface contains many small absorbing traps. This study is motivated by two examples of cellular transport. The first is the intracellular process through which proteins transit from the cytosol to the interior of the nucleus through nuclear pore complexes that are distributed on the nuclear surface. The second is the problem of chemoreception, in which cells sense their surroundings through diffusive contact with receptors distributed on the cell exterior. Using a matched asymptotic analysis in terms of small absorbing pore radius, we derive and numerically verify a high order expansion for the capacitance of the structured target which incorporates surface effects and gives explicit information on interpore interaction through a Coulomb-type discrete energy with additional logarithmic dependencies. In the large
Siam Journal on Applied Mathematics | 2015
Alan E. Lindsay; Michael J. Ward; Theodore Kolokolnikov
N
Multiscale Modeling & Simulation | 2017
Alan E. Lindsay; Justin Tzou; Theodore Kolokolnikov
dilute surface trap fraction limit, a single homogenized Robin boundary condition
Journal of Computational Physics | 2017
Kelsey L. DiPietro; Alan E. Lindsay
\partial_n v + \kappa v = 0
Siam Journal on Applied Mathematics | 2018
Andrew J. Bernoff; Alan E. Lindsay
is derived in which
Journal of Computational Physics | 2018
Kelsey L. DiPietro; Ronald D. Haynes; Weizhang Huang; Alan E. Lindsay; Yufei Yu
\kappa
Advances in Computational Mathematics | 2018
Alan E. Lindsay; Bryan Quaife; Laura Wendelberger
depends on the total absorbing fraction, the characteristic pore scale, and parameters relating to interpore interactions.
bioRxiv | 2017
Ricardo A. Fernandes; Kristina Anne Ganzinger; Justin Tzou; Peter Jönsson; Steven F. Lee; Matthieu Palayret; Ana Mafalda Santos; Veronica T. Chang; Charlotte Macleod; B. Christoffer Lagerholm; Alan E. Lindsay; Omer Dushek; Andreas Tilevik; Simon J. Davis; David Klenerman
The mixed-order eigenvalue problem
Physical Review E | 2016
Alan E. Lindsay; Ryan T. Spoonmore; Justin Tzou
-\delta \Delta^2 u + \Delta u + \lambda u = 0
Methods and applications of analysis | 2008
Alan E. Lindsay; Michael J. Ward
with