Alastair T. Gardiner
University of Glasgow
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Featured researches published by Alastair T. Gardiner.
Proceedings of the National Academy of Sciences of the United States of America | 2006
Donatas Zigmantas; Elizabeth L. Read; Tomáš Mančal; Tobias Brixner; Alastair T. Gardiner; Richard J. Cogdell; Graham R. Fleming
Emerging nonlinear optical spectroscopies enable deeper insight into the intricate world of interactions and dynamics of complex molecular systems. 2D electronic spectroscopy appears to be especially well suited for studying multichromophoric complexes such as light-harvesting complexes of photosynthetic organisms as it allows direct observation of couplings between the pigments and charts dynamics of energy flow on a 2D frequency map. Here, we demonstrate that a single 2D experiment combined with self-consistent theoretical modeling can determine spectroscopic parameters dictating excitation energy dynamics in the bacterial B800–B820 light-harvesting complex, which contains 27 bacteriochlorophyll molecules. Ultrafast sub-50-fs dynamics dominated by coherent intraband processes and population transfer dynamics on a picosecond time scale were measured and modeled with one consistent set of parameters. Theoretical 2D spectra were calculated by using a Frenkel exciton model and modified Förster/Redfield theory for the calculation of dynamics. They match the main features of experimental spectra at all population times well, implying that the energy level structure and transition dipole strengths are modeled correctly in addition to the energy transfer dynamics of the system.
Photosynthesis Research | 2004
Richard J. Cogdell; Alastair T. Gardiner; Aleksander W. Roszak; Christopher J. Law; June Southall; Neil W. Isaacs
This Review summarises the current state of research on the structure and function of light-harvesting apparatus in purple photosynthetic bacteria. Particular emphasis is placed on the major open questions still outstanding in this field in addition to what is already known.
Photosynthesis Research | 1993
Alastair T. Gardiner; Richard J. Cogdell; Shinichi Takaichi
The detailed effect on the light-harvesting apparatus of three different wild-type strains of Rhodopseudomonas acidophila in response to changes in both light-intensity and temperature have been investigated. In all three strains at high light-intensities (160 μmol s m2 and above) the only LH2 antenna complex synthesised is the B800–850 complex. In strains 7050 and 7750 as the light-intensity is lowered the B800–850 complex is gradually replaced by another type of LH2 the B800–820 complex. However, at no light-intensities studied is this changeover complete when the cells are grown at 30°C. If however, the light-intensity is lowered at temperatures below 25°C with strain 7750 there is a complete replacement of the B800–850 complex by the B800–820 complex. At all light-intensities and temperatures tested, strain 10050 only synthesised the B800–850 complex. Strain 7050 also responded to changes in light-intensity by altering its carotenoid composition. At high light-intensity the major carotenoids were rhodopin and rhodopin-glucoside, while at low light-intensities the major ones were rhodopinal and rhodopinal-glucoside. This change in carotenoid content started to occur at rather higher light-intensities than the switchover from B800–850 to B800–820.
Journal of Physical Chemistry B | 2008
Hong Cong; Dariusz M. Niedzwiedzki; George N. Gibson; Amy M. LaFountain; Rhiannon M. Kelsh; Alastair T. Gardiner; Richard J. Cogdell; Harry A. Frank
Steady-state and ultrafast time-resolved optical spectroscopic investigations have been carried out at 293 and 10 K on LH2 pigment-protein complexes isolated from three different strains of photosynthetic bacteria: Rhodobacter (Rb.) sphaeroides G1C, Rb. sphaeroides 2.4.1 (anaerobically and aerobically grown), and Rps. acidophila 10050. The LH2 complexes obtained from these strains contain the carotenoids, neurosporene, spheroidene, spheroidenone, and rhodopin glucoside, respectively. These molecules have a systematically increasing number of pi-electron conjugated carbon-carbon double bonds. Steady-state absorption and fluorescence excitation experiments have revealed that the total efficiency of energy transfer from the carotenoids to bacteriochlorophyll is independent of temperature and nearly constant at approximately 90% for the LH2 complexes containing neurosporene, spheroidene, spheroidenone, but drops to approximately 53% for the complex containing rhodopin glucoside. Ultrafast transient absorption spectra in the near-infrared (NIR) region of the purified carotenoids in solution have revealed the energies of the S1 (2(1)Ag-)-->S2 (1(1)Bu+) excited-state transitions which, when subtracted from the energies of the S0 (1(1)Ag-)-->S2 (1(1)Bu+) transitions determined by steady-state absorption measurements, give precise values for the positions of the S1 (2(1)Ag-) states of the carotenoids. Global fitting of the ultrafast spectral and temporal data sets have revealed the dynamics of the pathways of de-excitation of the carotenoid excited states. The pathways include energy transfer to bacteriochlorophyll, population of the so-called S* state of the carotenoids, and formation of carotenoid radical cations (Car*+). The investigation has found that excitation energy transfer to bacteriochlorophyll is partitioned through the S1 (1(1)Ag-), S2 (1(1)Bu+), and S* states of the different carotenoids to varying degrees. This is understood through a consideration of the energies of the states and the spectral profiles of the molecules. A significant finding is that, due to the low S1 (2(1)Ag-) energy of rhodopin glucoside, energy transfer from this state to the bacteriochlorophylls is significantly less probable compared to the other complexes. This work resolves a long-standing question regarding the cause of the precipitous drop in energy transfer efficiency when the extent of pi-electron conjugation of the carotenoid is extended from ten to eleven conjugated carbon-carbon double bonds in LH2 complexes from purple photosynthetic bacteria.
Photosynthesis Research | 2002
Richard J. Cogdell; Tina D. Howard; Neil W. Isaacs; Karen McLuskey; Alastair T. Gardiner
This paper presents a concise review of the structural factors which control the energy of the Qy absorption band of bacteriochlorophyll a in purple bacterial antenna complexes. The energy of these Qy absorption bands is important for excitation energy transfer within the bacterial photosynthetic unit.
Molecular Membrane Biology | 2004
Christopher J. Law; Aleksander W. Roszak; June Southall; Alastair T. Gardiner; Neil W. Isaacs; Richard J. Cogdell
The harvesting of solar radiation by purple photosynthetic bacteria is achieved by circular, integral membrane pigment-protein complexes. There are two main types of light-harvesting complex, termed LH2 and LH1, that function to absorb light energy and to transfer that energy rapidly and efficiently to the photochemical reaction centres where it is trapped. This mini-review describes our present understanding of the structure and function of the purple bacterial light-harvesting complexes.
Biomacromolecules | 2012
Masaharu Kondo; Kouji Iida; Takehisa Dewa; Hirofumi Tanaka; Takuji Ogawa; Sakiko Nagashima; Kenji V. P. Nagashima; Keizo Shimada; Hideki Hashimoto; Alastair T. Gardiner; Richard J. Cogdell; Mamoru Nango
A polyhistidine (His) tag was fused to the C- or N-terminus of the light-harvesting (LH1)-α chain of the photosynthetic antenna core complex (LH1-RC) from Rhodobacter sphaeroides to allow immobilization of the complex on a solid substrate with defined orientation. His-tagged LH1-RCs were adsorbed onto a gold electrode modified with Ni-NTA. The LH1-RC with the C-terminal His-tag (C-His LH1-RC) on the modified electrode produced a photovoltaic response upon illumination. Electron transfer is unidirectional within the RC and starts when the bacteriochlorophyll a dimer in the RC is activated by light absorbed by LH1. The LH1-RC with the N-terminal His-tag (N-His LH1-RC) produced very little or no photocurrent upon illumination at any wavelength. The conductivity of the His-tagged LH1-RC was measured with point-contact current imaging atomic force microscopy, indicating that 60% of the C-His LH1-RC are correctly oriented (N-His 63%). The oriented C-His LH1-RC or N-His LH1-RC showed semiconductive behavior, that is, had the opposite orientation. These results indicate that the His-tag successfully controlled the orientation of the RC on the solid substrate, and that the RC produced photocurrent depending upon the orientation on the electrode.
FEBS Letters | 2003
Richard J. Cogdell; Neil W. Isaacs; Andrew A. Freer; Tina D. Howard; Alastair T. Gardiner; Steve M. Prince; Miroslavr Z Papiz
A typical purple bacterial photosynthetic unit consists of two types of light‐harvesting complex (LH1 and LH2) together with a reaction centre. This short review presents a description of the structure of the LH2 complex from Rhodopseudomonas acidophila, which has recently been improved to a resolution of 2.0 Å [Papiz et al., J. Mol. Biol. 326 (2003) 1523–1538]. We show how this structure has helped to reveal the details of the various excitation energy transfer events in which it is involved.
Biochimica et Biophysica Acta | 1991
Geurt Deinum; Stephan C.M. Otte; Alastair T. Gardiner; Thijs J. Aartsma; Richard J. Cogdell; Jan Amesz
Transfer of excitation energy was studied in three different cultures of the purple bacterium Rhodopseudomonas acidophila , which all contained the core antenna complex B880, but differed with respect to the type of peripheral antenna complex, which was either B800–820, B800–850, or both. Contrary to that of B800–850, the fluorescence emitted by B800–820 did not increase upon light-induced oxidation of P-870. Singlet-singlet annihilation measurements showed that in cells containing only B880 and B800–820 energy transfer can take place within a domain of 50 ± 20 bacteriochlorophyll (BChl) molecules, which number equals that of BChls per reaction center. In cells containing B800–850 energy transfer can take place over at least 200 BChls of B880. Our results are explained by a model where small clusters of B880, the size of one photosynthetic unit, are separated from each other by a more or less continuous array of B800–820 or B800–850 complexes. B800–820, but not B800–850, acts as an energy barrier between different B880 units.
Journal of Physical Chemistry B | 2008
Katsunori Nakagawa; Satoru Suzuki; Ritsuko Fujii; Alastair T. Gardiner; Richard J. Cogdell; Mamoru Nango; Hideki Hashimoto
Reconstitutions of the LH1 complexes from the purple photosynthetic bacterium Rhodospirillum rubrum S1 were performed with a range of carotenoid molecules having different numbers of C=C conjugated double bonds. Since, as we showed previously, some of the added carotenoids tended to aggregate and then to remain with the reconstituted LH1 complexes (Nakagawa, K.; Suzuki, S.; Fujii, R.; Gardiner, A.T.; Cogdell, R.J.; Nango, M.; Hashimoto, H. Photosynth. Res. 2008, 95, 339-344), a further purification step using a sucrose density gradient centrifugation was introduced to improve purity of the final reconstituted sample. The measured absorption, fluorescence-excitation, and Stark spectra of the LH1 complex reconstituted with spirilloxanthin were identical with those obtained with the native, spirilloxanthin-containing, LH1 complex of Rs. rubrum S1. This shows that the electrostatic environments surrounding the carotenoid and bacteriochlorophyll a (BChl a) molecules in both of these LH1 complexes were essentially the same. In the LH1 complexes reconstituted with either rhodopin or spheroidene, however, the wavelength maximum at the BChl a Qy absorption band was slightly different to that of the native LH1 complexes. These differences in the transition energy of the BChl a Qy absorption band can be explained using the values of the nonlinear optical parameters of this absorption band, i.e., the polarizability change Tr(Deltaalpha) and the static dipole-moment change |Deltamu| upon photoexcitation, as determined using Stark spectroscopy. The local electric field around the BChl a in the native LH1 complex (ES) was determined to be approximately 3.0x10(6) V/cm. Furthermore, on the basis of the values of the nonlinear optical parameters of the carotenoids in the reconstituted LH1 complexes, it is possible to suggest that the conformations of carotenoids, anhydrorhodovibrin and spheroidene, in the LH1 complex were similar to that of rhodopin glucoside in crystal structure of the LH2 complex from Rhodopseudomonas acidophila 10050.
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National Institute of Advanced Industrial Science and Technology
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