Albert Chakona
South African Institute for Aquatic Biodiversity
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Featured researches published by Albert Chakona.
Hydrobiologia | 2008
Albert Chakona; Crispen Phiri; Christopher H. D. Magadza; Luc Brendonck
Temporary rivers within the Nyaodza-Gachegache subcatchment in northwestern Zimbabwe were investigated to examine the role of flow permanence and habitat structure on macroinvertebrate community composition. Macroinvertebrate communities of intermittent and ephemeral rivers displayed significant differences in the number of taxa, macroinvertebrate abundance, Shannon and Simpson diversity indices and in size class structure. Intermittent sites were characterised by higher numbers of taxa, diversity and Ephemeroptera and Trichoptera richness compared to ephemeral sites. The fauna of ephemeral sites was dominated by a single taxon (Afrobaetodes) (Ephemeroptera, Baetidae) whilst larger sized taxa (e.g. Elassoneuria (Ephemeroptera, Oligoneuriidae), Dicentroptilum (Ephemeroptera, Baetidae), Aethaloptera (Trichoptera, Hydropsychidae), Pseudagrion (Odonata, Coenagrionidae) and Tholymis (Odonata, Libellulidae) were exclusively restricted to intermittent sites. Clear differences were observed between sand, gravel, cobble and vegetation habitats. Vegetation and cobbles supported distinct communities, with some taxa exclusively restricted either to vegetation (e.g. Pseudagrion, Leptocerina (Trichoptera, Leptoceridae), Cloeon (Ephemeroptera, Baetidae), Afronurus (Ephemeroptera, Heptageniidae) and Povilla (Ephemeroptera, Polymitarcidae) or cobble (e.g. Aethaloptera and Dicentroptilum) habitats. In terms of ensuring optimum diversity within the subcatchment, we consider conservation of critical habitats (cobbles and vegetation) and maintenance of natural flows as the appropriate management actions.
PLOS ONE | 2013
Albert Chakona; Ernst R. Swartz; Gavin Gouws
This study used phylogenetic analyses of mitochondrial cytochrome b sequences to investigate genetic diversity within three broadly co-distributed freshwater fish genera (Galaxias, Pseudobarbus and Sandelia) to shed some light on the processes that promoted lineage diversification and shaped geographical distribution patterns. A total of 205 sequences of Galaxias, 177 sequences of Pseudobarbus and 98 sequences of Sandelia from 146 localities across nine river systems in the south-western Cape Floristic Region (South Africa) were used. The data were analysed using phylogenetic and haplotype network methods and divergence times for the clades retrieved were estimated using *BEAST. Nine extremely divergent (3.5–25.3%) lineages were found within Galaxias. Similarly, deep phylogeographic divergence was evident within Pseudobarbus, with four markedly distinct (3.8–10.0%) phylogroups identified. Sandelia had two deeply divergent (5.5–5.9%) lineages, but seven minor lineages with strong geographical congruence were also identified. The Miocene-Pliocene major sea-level transgression and the resultant isolation of populations in upland refugia appear to have driven widespread allopatric divergence within the three genera. Subsequent coalescence of rivers during the Pleistocene major sea-level regression as well as intermittent drainage connections during wet periods are proposed to have facilitated range expansion of lineages that currently occur across isolated river systems. The high degree of genetic differentiation recovered from the present and previous studies suggest that freshwater fish diversity within the south-western CFR may be vastly underestimated, and taxonomic revisions are required.
Hydrobiologia | 2009
Albert Chakona; Crispen Phiri; Jenny A. Day
Many rivers in southern Africa are increasingly threatened by accelerating geomorphological degradation due to unsustainable agricultural practices and deforestation. Thus, there is a critical need for biological indicators of morphological degradation in running waters. This study analysed the composition and abundance of Trichoptera taxa from 32 sites from rivers in eastern and northwestern Zimbabwe in relation to geomorphological and land use parameters. Redundancy analysis (RDA) and Spearman’s rank correlation analysis revealed that species in the genera Anisocentropus, Dyschimus, Lepidostoma, Leptocerina, Athripsodes, Parasetodes, Aethaloptera, Hydropsyche and Polymorphanisus were restricted to undisturbed forested sites, suggesting that these Trichoptera taxa may be used as indicators of structural degradation in watercourses. A species in the genus Hydroptila was the only Trichoptera taxon that showed a statistically significant numerical abundance at disturbed agricultural sites.
Aquatic Ecology | 2009
Albert Chakona; Crispen Phiri; Tendayi Chinamaringa; Nikite W.J. Muller
Macroinvertebrates were sampled from 15 sites along a dry-land river in northwestern Zimbabwe to assess biotic responses to land use changes along the course of the river. The headwater sites were protected by a riparian corridor of native forest, but this was replaced by intensive subsistence agriculture in the mid-reaches while the lower reaches were located within a protected wildlife area with diverse and wide riparian forests. Canonical correspondence analysis indicated that intensive agricultural activities within the mid-reaches caused severe degradation of the stream physical habitat through increased fine sediment deposition. This coincided with a significant decline in macroinvertebrate richness, diversity, and abundance at the agriculturally impacted mid-reach sites. The presence of wide riparian zones at the lower river sites resulted in significant improvements in stream physical habitat quality, and this was paralleled by significant recovery or reappearance of taxa that had disappeared from the mid-reaches. We suggest that restoration of the riparian vegetation within the mid-reaches of the Nyaodza River would lead to improved physical habitat and biotic health of this dry-land river.
BMC Ecology | 2012
Albert Chakona; Ernst R. Swartz
BackgroundKnowledge of the factors that drive species distributions provides a fundamental baseline for several areas of research including biogeography, phylogeography and biodiversity conservation. Data from 148 minimally disturbed sites across a large drainage system in the Cape Floristic Region of South Africa were used to test the hypothesis that stream fishes have similar responses to environmental determinants of species distribution. Two complementary statistical approaches, boosted regression trees and hierarchical partitioning, were used to model the responses of four fish species to 11 environmental predictors, and to quantify the independent explanatory power of each predictor.ResultsElevation, slope, stream size, depth and water temperature were identified by both approaches as the most important causal factors for the spatial distribution of the fishes. However, the species showed marked differences in their responses to these environmental variables. Elevation and slope were of primary importance for the laterally compressed Sandelia spp. which had an upstream boundary below 430 m above sea level. The fusiform shaped Pseudobarbus ‘Breede’ was strongly influenced by stream width and water temperature. The small anguilliform shaped Galaxias ‘nebula’ was more sensitive to stream size and depth, and also penetrated into reaches at higher elevation than Sandelia spp. and Pseudobarbus ‘Breede’.ConclusionsThe hypothesis that stream fishes have a common response to environmental descriptors is rejected. The contrasting habitat associations of stream fishes considered in this study could be a reflection of their morphological divergence which may allow them to exploit specific habitats that differ in their environmental stressors. Findings of this study encourage wider application of complementary methods in ecological studies, as they provide more confidence and deeper insights into the variables that should be managed to achieve desired conservation outcomes.
Hydrobiologia | 2014
Ernst R. Swartz; Albert Chakona; Paul H. Skelton; Paulette Bloomer
The primary freshwater fish Pseudobarbus burchelli (Smith 1841) occurs across four presently isolated river systems in the south-western cape floristic region of South Africa. Mitochondrial DNA cytochrome b (701 base pairs) and control region (601 base pairs) genes were sequenced to assess the evolutionary history of P. burchelli and evaluate the role of climatic and landscape changes in shaping patterns of genetic variation in this species. We identified three historically isolated lineages in P. burchelli: a widespread lineage that occurs across three isolated river systems and two geographically restricted lineages. The results were evaluated against predictions of the confluence of river systems during low sea levels of the last glacial maximum. Occurrence of the widespread Breede lineage in the Duiwenhoks River system is consistent with reconstructed palaeoriver systems. However, the occurrence of this lineage in the Goukou river system that formed part of the eastern Gourits–Goukou palaeoriver system can only be explained by translocation or a recent river capture or episodic inundation of low drainage divides. Extreme ecological gradients or the potential presence of instream physical barriers could have prevented an exchange of lineages between the Breede and Heuningnes river systems.
Hydrobiologia | 2013
Wilbert T. Kadye; Albert Chakona; Lightone Marufu; Tendai Samukange
Non-native trout species have been associated with many negative effects in receiving ecosystems. The first aim of this study was to determine the impact of non-native rainbow trout Oncorhynchus mykiss on distribution and abundance of native mountain catfish Amphilius uranoscopus within Afro-montane streams in Nyanga Mountains, eastern Zimbabwe. The second aim was to compare macro-invertebrate community responses to the presence of the trout and the catfish. We examined trout impact on catfish’s habitat associations, whereas macro-invertebrate composition was compared using open fish and fish exclosure experiments in habitats with and without trout. Trout influenced both the distribution and abundance of the catfish that occupied shallow reaches possibly to avoid predation from trout that occurred in the deeper habitats. Within trout invaded reaches, most macro-invertebrate taxa were more abundant in exclosure than open treatments. By contrast, within trout-free reaches, most macro-invertebrates either did not differ between treatments or were generally more abundant in open than exclosure treatments. This suggests that the macro-invertebrate communities responded differently within invaded and non-invaded reaches. By influencing distribution and abundance of native biota, non-native rainbow trout may have wider ecological effects, such as influencing trophic interrelationships within invaded habitats.
ZooKeys | 2014
Albert Chakona; Ernst R. Swartz; Paul H. Skelton
Abstract Pseudobarbus verloreni, a new species, is described from material collected in the Verlorenvlei River system on the west coast of South Africa. It differs from its congeners (except Pseudobarbus skeltoni, Pseudobarbus burchelli, and Pseudobarbus burgi) by the presence of two pairs of oral barbels. Pseudobarbus verloreni sp. n. can be distinguished from the three currently described double barbeled Pseudobarbus species by the following combination of characters: pigment pattern, generally deeper body relative to standard length, a longer intestine associated with the deeper body form, shorter snout relative to head length, and much shorter anterior barbels relative to head length. The new species is distinguished from Pseudobarbus burgi in the neighbouring Berg River system by its longer head and longer pre-dorsal length. It seems as if Pseudobarbus verloreni sp. n. has been extirpated from the Langvlei River system and face several threats to its survival in the Verlorenvlei River system.
Ecology and Evolution | 2015
Gamuchirai Chakona; Ernst R. Swartz; Albert Chakona
Range expansion of obligate freshwater fishes in the Cape Floristic Region (CFR) of South Africa has mostly been attributed to river capture events and confluence of rivers following sea-level regression. The role of low drainage divides and interbasin water transfers has received less attention. This study analyzed mitochondrial and nuclear DNA sequences to assess the processes that could have influenced the phylogeographic patterns of a newly discovered lineage of Galaxias zebratus (hereafter Galaxias zebratus “Joubertina”) that occurs across two currently isolated river systems close to the Joubertina area in the eastern CFR. Results from both analyses revealed that observed genetic differentiation cannot be explained by isolation between the two river systems. No genetic differentiation was found between the Krom River system and a population from one of the Gamtoos tributaries. Shallow genetic differentiation was found between the Krom and the other Gamtoos populations. Historical river capture events and sea-level changes do not explain the present distribution of Galaxias zebratus “Joubertina” across the Krom and Gamtoos River systems. Interbasin dispersal during pluvial periods, recent river capture, or recent human-mediated translocation seems to be the most plausible explanations.
African Journal of Aquatic Science | 2011
Crispen Phiri; Albert Chakona; Jenny A. Day
The effect of variations in the density of a submerged macrophyte, Lagarosiphon ilicifolius, on epiphytic macroinvertebrate community structure in the shallow waters of a sheltered bay of Lake Kariba were investigated. The body size class distributions of a mayfly, Cloeon (Ephemeroptera: Baetidae), and the damselfly family, Coenagrionidae, were also assessed with respect to variation in vegetation density. Macroinvertebrates were sampled from low-, moderate- and high-density beds of L. ilicifolius. There were no significant differences in individual taxon and total macroinvertebrate abundances, macroinvertebrate richness and diversity with respect to vegetation density. In all three density categories the functional feeding group (FFG) composition was dominated by collector-gatherers and collector-filterers. The abundance of the two FFGs did not change significantly within each, as well as among, the three vegetation-density categories (ANOVA, p > 0.05). The largest size class of Cloeon occurred only in high-density beds, whereas the largest coenagrionid individuals were obtained from low- and moderate-density beds and were absent from high-density beds. The results suggest that variation in the density of Lagarosiphon does not affect epiphytic macroinvertebrate community structure, but does affect body-size distributions of macroinvertebrate taxa, probably by affecting predator-prey interactions.