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Dive into the research topics where Aleksandra Dabkowska is active.

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Featured researches published by Aleksandra Dabkowska.


Langmuir | 2008

Floating lipid bilayers deposited on chemically grafted phosphatidylcholine surfaces

Arwel V. Hughes; Jonathan R. Howse; Aleksandra Dabkowska; Richard A. L. Jones; M. Jayne Lawrence; Stephen J. Roser

Floating supported bilayers (FSBs) are new systems which have emerged over the past few years to produce supported membrane mimics, where the bilayers remain associated with the substrate, but are cushioned from the substrates constraining influence by a large hydration layer. In this paper we describe a new approach to fabricating FSBs using a chemically grafted phospholipid layer as the support for the floating membrane. The grafted lipid layer was produced using a Langmuir-Schaeffer transfer of acryloyl-functionalized lipid onto a pre-prepared substrate, with AIBN-induced cross-polymerization to permanently bind the lipids in place. A bilayer of DSPC was then deposited onto this grafted monolayer using a combination of Langmuir-Blodgett and Langmuir-Schaeffer transfer. The resulting system was characterized by neutron reflection under two water contrasts, and we show that the new system shows a hydrating layer of approximately 17.5 A in the gel phase, which is comparable to previously described FSB systems. We provide evidence that the grafted substrate is reusable after cleaning and suggest that this greatly simplifies the fabrication and characterization of FSBs compared to previous methods.


Journal of the Royal Society Interface | 2012

The effect of neutral helper lipids on the structure of cationic lipid monolayers

Aleksandra Dabkowska; David Barlow; Arwel V. Hughes; Richard A. Campbell; Peter J. Quinn; Margaret Lawrence

Successful drug delivery via lipid-based systems has often been aided by the incorporation of ‘helper lipids’. While these neutral lipids enhance the effectiveness of cationic lipid-based delivery formulations, many questions remain about the nature of their beneficial effects. The structure of monolayers of the cationic lipid dimethyldioctadecylammonium bromide (DODAB) alone, and mixed with a neutral helper lipid, either diolelyphosphatidylethanolamine or cholesterol at a 1 : 1 molar ratio was investigated at the air–water interface using a combination of surface pressure–area isotherms, Brewster angle microscopy (BAM) and specular neutron reflectivity in combination with contrast variation. BAM studies showed that while pure DODAB and DODAB with cholesterol monolayers showed fairly homogeneous surfaces, except in the regions of phase transition, monolayers of DODAB with diolelyphosphatidylethanolamine were, in contrast, inhomogeneous exhibiting irregular bean-shaped domains throughout. Neutron reflectivity data showed that while the thickness of the DODAB monolayer increased from 17 to 24 Å as it was compressed from a surface pressure of 5–40 mN m−1, the thickness of the helper lipid-containing monolayers, over the same range of surface pressures, was relatively invariant at between 25 and 27 Å. In addition, the monolayers containing diolelyphosphatidylethanolamine were found to be more heavily hydrated than the monolayers of cationic lipid, alone or in combination with cholesterol, with hydration levels of 18 molecules of water per molecule of lipid being recorded for the diolelyphosphatidylethanolamine-containing monolayers at a surface pressure of 30 mN m−1 compared with only six and eight molecules of water per molecule of lipid for the pure DODAB monolayer and the cholesterol-containing DODAB monolayer, respectively.


Langmuir | 2014

Modulation of dipalmitoylphosphatidylcholine monolayers by dimethyl sulfoxide.

Aleksandra Dabkowska; Louise Collins; David Barlow; Robert Barker; Sylvia E. McLain; M. Jayne Lawrence; Christian D. Lorenz

The action of the penetration-enhancing agent, dimethyl sulfoxide (DMSO), on phospholipid monolayers was investigated at the air-water interface using a combination of experimental techniques and molecular dynamics simulations. Brewster angle microscopy revealed that DPPC monolayers remained laterally homogeneous at subphase concentrations up to a mole fraction of 0.1 DMSO. Neutron reflectometry of the monolayers in combination with isotopic substitution enabled the determination of solvent profiles as a function of distance perpendicular to the interface for the different DMSO subphase concentrations. These experimental results were compared to those obtained from molecular dynamic (MD) simulations of the corresponding monolayer systems. There was excellent agreement found between the MD-derived reflectivity curves and the measured data for all of the H/D contrast variations investigated. The MD provide a detailed description of the distribution of water and DMSO molecules around the phosphatidylcholine headgroup, and how this distribution changes with increasing DMSO concentrations. Significantly, the measurements and simulations that are reported here support the hypothesis that DMSO acts by dehydrating the phosphatidylcholine headgroup, and as such provide the first direct evidence that it does so primarily by displacing water molecules bound to the choline group.


Soft Matter | 2013

Calcium mediated interaction of calf-thymus DNA with monolayers of distearoylphosphatidylcholine: a neutron and X-ray reflectivity study

Aleksandra Dabkowska; Jonathan P. Talbot; Leide P. Cavalcanti; John R. P. Webster; Andrew Nelson; David Barlow; Giovanna Fragneto; M. Jayne Lawrence

X-ray and neutron reflection studies, the latter in conjunction with contrast variation, have been combined to study the interaction of calf thymus DNA (ctDNA) with monolayers of distearoylphosphatidylcholine (DSPC) in the presence of 20 mM Ca2+ ions, at the air–liquid interface as a function of surface pressure (10, 20, 30 and 40 mN m−1). Analysis of the X-ray and neutron reflection data showed that, regardless of the surface pressure of the monolayer, a layer of ctDNA was present below the DSPC lipid head groups and that this ctDNA-containing layer (thickness ∼12.5 to 15 A) was separated from the DSPC head groups by a layer of water of ∼9 A thickness. The thickness of the ctDNA-containing layer was thinner than that reported for monolayers of cationic lipid at the air–water interface (18–25 A) although in these monolayers no water layer separating the lipid head groups from the layer containing ctDNA has been reported. At all surface pressures the amount of ctDNA present in the layer was in the range 30–40% by volume. As no significant re-arrangement of the DSPC film was required to accommodate the presence of the ctDNA, this suggests that the distribution of charges in the lipid film matches well the charge spacing of ctDNA. Brewster angle microscopy measurements of DSPC on water in the absence of Ca2+ showed the presence of a continuous film containing small, regular shaped domains at all four surface pressures examined. When Ca2+ ions were present in the sub-phase, although the film was still continuous, the domains comprising the film were more irregular in appearance while the presence of Ca2+ ions and ctDNA resulted in the domains becoming smaller and more regularly packed on the surface.


Biomedical optics | 2004

Characterization of the conformational changes of a tripartite molecular beacon

Cecile Couzon; Daniel S. Banks; James Jonkman; Aleksandra Dabkowska; Razvan Nutiu; Yingfu Li; Cécile Fradin

We have investigated the kinetics of the conformational changes of a new type of molecular beacons called tripartite molecular beacons. The rate constants corresponding to the opening and closing of the beacons have been obtained from fluorescence correlation spectroscopy experiments. We found that both rate constants are larger for the tripartite molecular beacon than for the corresponding molecular beacon. This paper outlines the importance of using very low excitation intensities for this type of measurements, and of considering the fact that the beacon still emits a residual background fluorescence in its closed form. We also report on the exploration of several strategies to improve the precision of the measurements by increasing the characteristic time associated with the diffusion of the beacons so that it would not be confused with the relaxation time associated with the conformational changes.


Biomacromolecules | 2012

Effect of helper lipids on the interaction of DNA with cationic lipid monolayers studied by specular neutron reflection.

Aleksandra Dabkowska; David Barlow; Richard A. Campbell; Arwel V. Hughes; Peter J. Quinn; Margaret Lawrence


Chemical Physics | 2013

On the nature of hydrogen bonding between the phosphatidylcholine head group and water and dimethylsulfoxide

Aleksandra Dabkowska; M. Jayne Lawrence; Sylvia E. McLain; Christian D. Lorenz


Langmuir | 2009

Specular Neutron Reflectivity Studies of the Interaction of Cytochrome c with Supported Phosphatidylcholine Bilayers Doped with Phosphotidylserine

Aleksandra Dabkowska; Giovanna Fragneto; Arwel V. Hughes; Peter J. Quinn; Margaret Lawrence


Soft Matter | 2014

Calcium-mediated binding of DNA to 1,2-distearoyl-sn-glycero-3-phosphocholine-containing mixed lipid monolayers

Aleksandra Dabkowska; David Barlow; Luke A. Clifton; Arwel V. Hughes; John R. P. Webster; Rebecca J. Green; Peter J. Quinn; M. Jayne Lawrence


Journal of Physical Chemistry B | 2013

The nature of bonding between water and dimethylsulfoxide around the phosphatidylcholine head group in solution

Aleksandra Dabkowska; Margaret Lawrence; Sylvia E. McLain; Chris Lorenz

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Arwel V. Hughes

Rutherford Appleton Laboratory

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John R. P. Webster

Rutherford Appleton Laboratory

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