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Dive into the research topics where Alena Jonášová is active.

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Featured researches published by Alena Jonášová.


Mathematics and Computers in Simulation | 2010

Non-Newtonian effects of blood flow in complete coronary and femoral bypasses

Jan Vimmr; Alena Jonášová

A numerical investigation of non-Newtonian steady blood flow in a complete idealized 3D bypass model with occluded native artery is presented in order to study the non-Newtonian effects for two different sets of physiological parameters (artery diameter and inlet Reynolds number), which correspond to average coronary and femoral native arteries. Considering the blood to be a generalized Newtonian fluid, the shear-dependent viscosity is evaluated using the Carreau-Yasuda model. All numerical simulations are performed by an incompressible Navier-Stokes solver developed by the authors, which is based on the pseudo-compressibility approach and the cell-centred finite volume method defined on unstructured hexahedral computational grid. For the time integration, the fourth-stage Runge-Kutta algorithm is used. The analysis of numerical results obtained for the non-Newtonian and Newtonian flows through the coronary and femoral bypasses is focused on the distribution of velocity and wall shear stress in the entire length of the computational model, which consists of the proximal and distal native artery and the connected end-to-side bypass graft.


International Journal for Numerical Methods in Biomedical Engineering | 2013

Numerical analysis of non-Newtonian blood flow and wall shear stress in realistic single, double and triple aorto-coronary bypasses.

Jan Vimmr; Alena Jonášová; Ondřej Bublík

Considering the fact that hemodynamics plays an important role in the patency and overall performance of implanted bypass grafts, this work presents a numerical investigation of pulsatile non-Newtonian blood flow in three different patient-specific aorto-coronary bypasses. The three bypass models are distinguished from each other by the number of distal side-to-side and end-to-side anastomoses and denoted as single, double and triple bypasses. The mathematical model in the form of time-dependent nonlinear system of incompressible Navier-Stokes equations is coupled with the Carreau-Yasuda model describing the shear-thinning property of human blood and numerically solved using the principle of the SIMPLE algorithm and cell-centred finite volume method formulated for hybrid unstructured tetrahedral grids. The numerical results computed for non-Newtonian and Newtonian blood flow in the three aorto-coronary bypasses are compared and analysed with emphasis placed on the distribution of cycle-averaged wall shear stress and oscillatory shear index. As shown in this study, the non-Newtonian blood flow in all of the considered bypass models does not significantly differ from the Newtonian one. Our observations further suggest that, especially in the case of sequential grafts, the resulting flow field and shear stimulation are strongly influenced by the diameter of the vessels involved in the bypassing.


Journal of Mathematical Biology | 2018

Modeling of the contrast-enhanced perfusion test in liver based on the multi-compartment flow in porous media

Eduard Rohan; Vladimír Lukeš; Alena Jonášová

The paper deals with modeling the liver perfusion intended to improve quantitative analysis of the tissue scans provided by the contrast-enhanced computed tomography (CT). For this purpose, we developed a model of dynamic transport of the contrast fluid through the hierarchies of the perfusion trees. Conceptually, computed time-space distributions of the so-called tissue density can be compared with the measured data obtained from CT; such a modeling feedback can be used for model parameter identification. The blood flow is characterized at several scales for which different models are used. Flows in upper hierarchies represented by larger branching vessels are described using simple 1D models based on the Bernoulli equation extended by correction terms to respect the local pressure losses. To describe flows in smaller vessels and in the tissue parenchyma, we propose a 3D continuum model of porous medium defined in terms of hierarchically matched compartments characterized by hydraulic permeabilities. The 1D models corresponding to the portal and hepatic veins are coupled with the 3D model through point sources, or sinks. The contrast fluid saturation is governed by transport equations adapted for the 1D and 3D flow models. The complex perfusion model has been implemented using the finite element and finite volume methods. We report numerical examples computed for anatomically relevant geometries of the liver organ and of the principal vascular trees. The simulated tissue density corresponding to the CT examination output reflects a pathology modeled as a localized permeability deficiency.


Applied Mathematics and Computation | 2018

Noninvasive assessment of carotid artery stenoses by the principle of multiscale modelling of non-Newtonian blood flow in patient-specific models

Alena Jonášová; Jan Vimmr

The concept of geometrical multiscale modelling of non-Newtonian blood flow in patient-specific models is presented with the aim to provide a methodology for the assessment of hemodynamic significance of carotid artery stenoses. The content of the paper is divided into two consequent parts. In the first one, the principle of the fractional flow reserve (FFR) as an indicator of ischemia-inducing arterial stenoses is tested on three large arterial models containing the aortic arch and both left and right carotid arteries. Using the three-element Windkessel model as an outflow boundary condition, the blood flow simulations are carried out on the basis of data taken from the literature due to unavailable information on patient-specific flow and pressure waveforms. In the second part of the paper, the incorporation of real in-vivo measurements into the multiscale simulations is addressed by presenting a sequential algorithm for the estimation of Windkessel parameters. The ability of the described estimation method, which employs a non-linear state estimator (unscented Kalman filter) on zero-dimensional flow models, is demonstrated on two different patient-specific carotid bifurcation models.


Journal of Biomechanics | 2012

PULSATILE NON-NEWTONIAN BLOOD FLOW MODELLING IN REALISTIC AORTO-CORONARY BYPASS GRAFTS

Alena Jonášová; Jan Vimmr; Ondřej Bublík

Nowadays it is generally accepted that hemodynamics has significantly influence on the performance and patency of implanted bypass grafts. In this regard blood flow modelling in realistic geometries can provide a valuable insight into the problem of graft failures associated with restenosis and/or occlusive intimal hyperplasia [Haruguchi, 2003]. Present study tries to contribute to this investigation by modelling pulsatile non-Newtonian blood flow in three realistic aorto-coronary bypass models and by analysing the distribution of hemodynamically significant factors such as wall shear stress (WSS) and oscillatory shear index (OSI).


Pamm | 2008

Numerical simulation of non-Newtonian blood flow in bypass models

Alena Jonášová; Jan Vimmr


Computers & Fluids | 2012

Effects of three geometrical parameters on pulsatile blood flow in complete idealised coronary bypasses

Jan Vimmr; Alena Jonášová; Ondřej Bublík


Applied and Computational Mechanics | 2014

A comparative study of 1D and 3D hemodynamics in patient-specific hepatic portal vein networks

Alena Jonášová; Ondřej Bublík; Jan Vimmr


Archive | 2007

Analysis of blood flow through a three-dimensional bypass model

Jan Vimmr; Alena Jonášová


arXiv: Computational Engineering, Finance, and Science | 2014

Numerical simulation of liver perfusion: from CT scans to FE model

Vladimír Lukeš; Miroslav Jirík; Alena Jonášová; Eduard Rohan; Ondrej Bublík; Robert Cimrman

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Jan Vimmr

University of West Bohemia

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Ondřej Bublík

University of West Bohemia

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Eduard Rohan

University of West Bohemia

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Vladimír Lukeš

University of West Bohemia

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Robert Cimrman

University of West Bohemia

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