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Dive into the research topics where Alexander W. Thomas is active.

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Featured researches published by Alexander W. Thomas.


Advanced Materials | 2013

Conjugated Oligoelectrolytes Increase Power Generation in E. coli Microbial Fuel Cells

Huijie Hou; Xiaofen Chen; Alexander W. Thomas; Chelsea Catania; Nathan D. Kirchhofer; Logan E. Garner; Arum Han; Guillermo C. Bazan

A series of conjugated oligoelectrolytes with structural variations is used to stain E. coli. By taking advantage of a high-throughput screening platform that incorporates gold anodes, it is found that MFCs with COE-modified E. coli generate significantly higher power densities, relative to unmodified E. coli. These findings highlight the potential of using water-soluble molecules inspired by the work on organic semiconductors to improve electrode/microbe interfaces.


Energy and Environmental Science | 2013

A lipid membrane intercalating conjugated oligoelectrolyte enables electrode driven succinate production in Shewanella

Alexander W. Thomas; Logan E. Garner; Kelly P. Nevin; Trevor L. Woodard; Ashley E. Franks; Derek R. Lovley; James J. Sumner; Christian J. Sund; Guillermo C. Bazan

An amphiphilic conjugated oligoelectrolyte (COE) that spontaneously intercalates into lipid membranes enables Shewanella oneidensis to use a graphite electrode as the sole electron donor for succinate production. Current consumed in a poised electrochemical system by Shewanella with micromolar concentrations of COE correlates well with the succinate produced via fumarate reduction as determined by HPLC analysis. Confocal microscopy confirms incorporation of the COE into the microbes on the electrode surface. This work presents a unique strategy to induce favorable bioelectronic interactions for the production of reduced microbial metabolites.


Energy and Environmental Science | 2012

Conjugated oligoelectrolytes increase current response and organic contaminant removal in wastewater microbial fuel cells.

Logan E. Garner; Alexander W. Thomas; James J. Sumner; Steven P. Harvey; Guillermo C. Bazan

The conjugated oligoelectrolyte 4,4′-bis(4′-(N,N-bis(6′′-(N,N,N-trimethylammonium)hexyl)amino)-styryl)stilbene tetraiodide (DSSN+) has been employed to improve the performance of wastewater microbial fuel cells (MFCs) with respect to current generation and organic contaminant removal. The best performance was afforded by biocathode type MFCs run in the presence of DSSN+. Laser scanning confocal microscopy confirmed cellular uptake of DSSN+ in the biofilms.


Langmuir | 2014

Modeling Cell Membrane Perturbation by Molecules Designed for Transmembrane Electron Transfer

Jamie Hinks; Yaofeng Wang; Wee Han Poh; Bogdan C. Donose; Alexander W. Thomas; Stefan Wuertz; Say Chye Joachim Loo; Guillermo C. Bazan; Staffan Kjelleberg; Yuguang Mu; Thomas Seviour

Certain conjugated oligoelectrolytes (COEs) modify biological function by improving charge transfer across biological membranes as demonstrated by their ability to boost performance in bioelectrochemical systems. Molecular level understanding of the nature of the COE/membrane interactions is lacking. Thus, we investigated cell membrane perturbation by three COEs differing in the number of aromatic rings and presence of a fluorine substitution. Molecular dynamic simulations showed that membrane deformation by all COEs resulted from membrane thinning as the lipid phosphate heads were drawn toward the center of the bilayer layer by positively charged COE side chains. The four-ringed COE, which most closely resembled the lipid bilayer in length, deformed the membrane the least and was least disruptive, as supported by toxicity testing (minimum inhibitory concentration (MIC) = 64 μmol L(-1)) and atomic force microscopy (AFM). Extensive membrane thinning was observed from three-ringed COEs, reducing membrane thickness to <3.0 nm in regions where the COEs were located. Severe localized membrane pitting was observed when the central aromatic ring was unfluorinated, as evident from AFM and simulations. Fluorinating the central aromatic ring delocalized thinning but induced greater membrane disorder, indicated by changes in deuterium order parameter of the acyl chains. The fluorinated three-ringed compound was less toxic (MIC 4 μmol L(-1)) than the nonfluorinated three-aromatic-ringed COE (MIC 2 μmol L(-1)); thus, hydrophobic polar interactions resulting from fluorine substitution of OPV COEs dissipate membrane perturbations. Correlating specific structural features with cell membrane perturbation is an important step toward designing non-antimicrobial membrane insertion molecules.


Journal of the American Chemical Society | 2014

Synthesis, characterization, and biological affinity of a near-infrared-emitting conjugated oligoelectrolyte.

Alexander W. Thomas; Zachary B. Henson; Jenny Du; Carol A. Vandenberg; Guillermo C. Bazan

A near-IR-emitting conjugated oligoelectrolyte (COE), ZCOE, was synthesized, and its photophysical features were characterized. The biological affinity of ZCOE is compared to that of an established lipid-membrane-intercalating COE, DSSN+, which has blue-shifted optical properties making it compatible for tracking preferential sites of accumulation. ZCOE exhibits diffuse staining of E. coli cells, whereas it displays internal staining of select yeast cells which also show propidium iodide staining, indicating ZCOE is a “dead” stain for this organism. Staining of mammalian cells reveals complete internalization of ZCOE through endocytosis, as supported by colocalization with LysoTracker and late endosome markers. In all cases DSSN+ persists in the outer membranes, most likely due to its chemical structure more closely resembling a lipid bilayer.


Langmuir | 2013

Aggregation properties of p-phenylene vinylene based conjugated oligoelectrolytes with surfactants.

Telma Costa; Logan E. Garner; Matti Knaapila; Alexander W. Thomas; Sarah E. Rogers; Guillermo C. Bazan; Hugh D. Burrows

The amphiphilic properties of conjugated oligoelectrolytes (COE) and their sensitivity to the polarity of their microenvironment lead to interesting aggregation behavior, in particular in their interaction with surfactants. Photoluminescence (PL) spectroscopy, liquid-phase atomic force microscopy, small-angle neutron scattering, small-angle X-ray scattering, and grazing-incidence X-ray diffraction were used to examine interactions between cationic p-phenylene vinylene based oligoelectrolytes and surfactants. These techniques indicate the formation of COE/surfactant aggregates in aqueous solution, and changes in the photophysical properties are observed when compared to pure aqueous solutions. We evaluate the effect of the charge of the surfactant polar headgroup, the size of the hydrophobic chain, and the role of counterions. At low COE concentrations (micromolar), it was found that these COEs display larger emission quantum efficiencies upon incorporation into micelles, along with marked blue-shifts of the PL spectra. This effect is most pronounced in the series of anionic surfactants, and the degree of blue shifts as a function of surfactant charge is as follows: cationic < nonionic < anionic surfactants. In anionic surfactants, such as sodium dodecyl sulfate (SDS), the PL spectra show vibronic resolution above the critical micelle concentration of the surfactant, suggesting more rigid structures. Scattering data indicate that in aqueous solutions, trimers appear as essentially 3-dimensional particles, while tetra- and pentamers form larger, cylindrical particles. When the molar ratio of nonionic C12E5 surfactant to 1,4-bis(4-{N,N-bis-[(N,N,N-trimethylammonium)hexyl]amino}-styryl)benzene tetraiodide (DSBNI) is close to one, the size of the formed DSBNI-C12E5 particles corresponds to the full coverage of individual oligomers. When these particles are transferred into thin films, they organize into a cubic in-plane pattern. If anionic SDS is added, the formed DSBNI-SDS particles are larger than expected for full surfactant coverage, and particles may thus contain several oligomers. This tendency is attributed to the merging of DSBNI oligomers due to the charge screening and, thus, reduced water solubility.


Journal of Physical Chemistry B | 2014

Self-Assembly of Poly{1,4-phenylene-[9,9-bis(4-phenoxy-butylsulfonate)]fluorene-2,7-diyl} with Oppositely Charged Phenylenevinylene Oligoelectrolytes

Telma Costa; Ana T. Marques; J. Sérgio Seixas de Melo; Alexander W. Thomas; Logan E. Garner; Ullrich Scherf; Guillermo C. Bazan; Hugh D. Burrows

The interaction of the water-soluble conjugated polyelectrolyte (CPE) poly{1,4-phenylene-[9,9-bis(4-phenoxy-butylsulfonate)]fluorene-2,7-diyl} (PBS-PFP) (degree of polymerization, DP, ∼3-6) with various concentrations of a homologous series of oppositely charged amphiphilic phenylenevinylene oligomers was investigated in water:dioxane mixtures and in aqueous micellar solutions of the non-ionic surfactant n-dodecylpentaoxyethylene glycol ether. The excellent spectral overlap between the CPE fluorescence and the conjugated oligoelectrolyte (COE) absorption indicates that energy transfer between these is a highly favored process, and can be tuned by changing the COE chain length. This is supported by time-resolved fluorescence data. The overall results provide support for different types of self-assembly, which are sensitive to the solvent environment and to the size of the phenylenevinylene oligoelectrolyte chain. It is suggested that large aggregates are formed in water:dioxane mixtures, while decorated core-shell structures are present in the surfactant solutions.


Physical Chemistry Chemical Physics | 2013

Improving charge collection in Escherichia coli-carbon electrode devices with conjugated oligoelectrolytes.

Victor Bochuan Wang; Jenny Du; Xiaofen Chen; Alexander W. Thomas; Nathan D. Kirchhofer; Logan E. Garner; Myat Thiri Maw; Wee Han Poh; Jamie Hinks; Stefan Wuertz; Staffan Kjelleberg; Qichun Zhang; Joachim Say Chye Loo; Guillermo C. Bazan


Chemical Communications | 2013

Increased ion conductance across mammalian membranes modified with conjugated oligoelectrolytes

Jenny Du; Alexander W. Thomas; Xiaofen Chen; Logan E. Garner; Carol A. Vandenberg; Guillermo C. Bazan


Chemical Communications | 2014

Phenylenevinylene conjugated oligoelectrolytes as fluorescent dyes for mammalian cell imaging

Paulina Gwozdzinska; Roza Pawlowska; Justyna Milczarek; Logan E. Garner; Alexander W. Thomas; Guillermo C. Bazan; Arkadiusz Chworos

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Jenny Du

University of California

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Xiaofen Chen

University of California

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Jamie Hinks

Nanyang Technological University

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