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Publication


Featured researches published by Ali Gücükoğlu.


International Journal of Infectious Diseases | 2015

Consensus report: Preventive measures for Crimean-Congo Hemorrhagic Fever during Eid-al-Adha festival.

Hakan Leblebicioglu; Mustafa Sunbul; Ziad A. Memish; Jaffar A. Al-Tawfiq; Hurrem Bodur; Aykut Özkul; Ali Gücükoğlu; Sadegh Chinikar; Zahra Hasan

Crimean-Congo hemorrhagic fever (CCHF) is endemic in Eurasian countries such as, Turkey, Pakistan, Afghanistan and Iran. CCHF virus is spread by the Hyalomma tick, which is found mainly on cattle and sheep. Muslim countries, in which these animals are sacrificed during Eid-Al-Adha, are among the countries where CCHF is endemic, and it has been observed that CCHF is associated with practices surrounding the Eid-ad-Adha festival. The dates for Eid-Al-Adha drift 10 days earlier in each year according to Georgian calendar. In previous years Eid-al-Adha occurred in autumn-winter months however in the next 10-15 years it will be take place in the summer months when CCHF is more prevalent. This may lead to a rise in the number of cases due to increased dissemination of CCHF virus with uncontrolled animal movements in and between countries. This consensus report focuses on the variable practices regarding animal handling in different regions and possible preventative measures to reduce the incidence of CCHF. Environmental hygiene and personal protection are essential parts of prevention. There is a need for international collaborative preparedness and response plans for prevention and management of CCHF during Eid-Al-Adha in countries where the disease is prevalent.


Journal of Food Science | 2012

Detection of Enterotoxigenic Staphylococcus aureus in Raw Milk and Dairy Products by Multiplex PCR

Ali Gücükoğlu; T. Onur Kevenk; Tolga Uyanik; Özgür Çadirci; Göknur Terzi; Mustafa Alişarlı

The aim of this study was to investigate the prevalence of enterotoxigenic Staphylococcus aureus in 122 samples, including 60 raw milk, 32 white cheese, 10 kashar cheese, 10 butter, and 10 ice cream samples obtained from Samsun province, Turkey. In this study, S. aureus was detected in 64 samples, including raw milk (45/60; 75%), white cheese (12/32; 37.5%), kashar cheese (3/10; 30%), butter (3/10; 30%), and ice cream (1/10; 10%) samples. A total of 81 isolates were identified as S. aureus by PCR with the presence of 16S rRNA and nuc genes. The presence of genes encoding the staphylococcal enterotoxins (SEs) SEA, SEB, SEC, and SED was detected by multiplex PCR. According to the analysis, seven isolates from the raw milk samples (7/51; 13.7%) were enterotoxigenic; five of them produced SEA (5/7; 71.4%), one produced SEB (1/7; 14.2%), and one produced SEA+SEB (1/7; 14.2%). Four isolates from the white cheese samples (4/21; 19%) produced the SEA (1/4; 25%), SEC (1/4; 25%), SED (1/4; 25%), and SEA+SED (1/4; 25%) toxins. Two isolates from the kashar cheese samples (2/4; 50%) were found to be enterotoxigenic; one produced SEA (1/2; 50%) and the other produced SED (1/2; 50%). One isolate from the butter samples (1/4; 25%) showed enterotoxigenic character (SEB, 1/1; 100%). The products were found to be potentially hazardous to public health because of the fact that levels of contamination were higher than 105-106 cfu/g ml in 39% (25/64, 17 raw milk, 7 white cheese, and 1 butter) of the analyzed samples.


Journal of Food Science | 2013

Determination of Enterotoxigenic and Methicillin Resistant Staphylococcus aureus in Ice Cream

Ali Gücükoğlu; Özgür Çadirci; Göknur Terzi; T. Onur Kevenk; Mustafa Alişarlı

The aim of this study was to determine the prevalence of enterotoxigenic and methicillin-resistant Staphylococcus aureus in ice creams. After culture-based identification of isolates, the presence of 16S rRNA and nuc was confirmed by mPCR. S. aureus was identified in 18 of 56 fruity (32.1%), 4 of 32 vanilla (12.5%), and 1 of 12 chocolate (8.3%) ice creams. S. aureus was identified as 38 isolates in 23 ice cream samples by culture-based techniques, but only 35 isolates were confirmed by PCR as S. aureus. To determine the enterotoxigenic properties of PCR-confirmed S. aureus isolates, a toxin detection kit was used (SET RPLA®). Of the 12 enterotoxigenic S. aureus isolates, 9 SEB (75%), 1 SED (8.3%), 1 SEB+SED (8.3%), and 1 SEA+SEB+SED (8.3%) expressing isolates were found. The presence of enterotoxin genes (sea, seb, sed) was identified in 13 (37.1%) out of 35 isolates by the mPCR technique. In the ice cream isolates, the sea, seb, and sed genes were detected: 1 sea (7.6%), 9 seb (69.2%), 1 sed (7.6%), 1 seb+sed (7.6%), and 1 sea+seb+sed (7.6%), respectively. The sec gene was not detected in any of these isolates. One of the 35 (2.8%) S. aureus strain was mecA positive.


Journal of Food Science | 2014

Detection of C. botulinum types in honey by mPCR.

Ali Gücükoğlu; Göknur Terzi; Özgür Çadirci; Mustafa Alişarlı; Onur Kevenk; Tolga Uyanik

The aim of this study was to determine the prevalence of Clostridium botulinum in honey samples using conventional methods and multiplex PCR (mPCR). A total number of 150 honey samples were randomly collected from apiaries, retail shops, weekly open bazaars, and supermarkets in Samsun, Turkey. Of 150 honey samples, 4 (2.6%) were positive for the botulinum neurotoxin gene by mPCR analysis. A total of 4 C. botulinum isolates were obtained from the mPCR positive samples, of which 3 were type A and 1 was type B. No samples were positive regarding the type E and type F neurotoxin genes. This is the first report of type A and type B spores of C. botulinum being detected and isolated in Turkey. This study revealed that some honey samples may present a potential hazard for food borne and infant botulism.


Turkish Journal of Agriculture: Food Science and Technology | 2018

Determination of Listeria monocytogenes and Serotypes in Modified Atmosphere Packed Ground and Cubed Beef Samples

Adem Özkiraz; Ali Gücükoğlu

This study was conducted to determine the Listeria monocytogenes’s presence, serotypes and resistance against various antibiotics in modified atmosphere packaged (MAP) ground and cubed beef samples. Five of ground (5/50-10%) and 3 of cubed beef samples (3/50-6%) were identified as L. monocytogenes positive in MAP samples. Eleven L. monocytogenes isolates that obtained from samples being investigated in term of hlyA gene by PCR method have verified that this gene (100%). In serotyping results, 3 of 8 isolate that obtained from MAP ground beef samples were 1/2a, the other 3 isolate was 1/2b and the remaining 2 isolate was 4b. Also, 1 of 3 isolate that obtained from MAP cubed beef samples were 1/2b, the other one isolate was 1/2c and the last one was 4b. One isolate against (9%) ampicillin, 2 isolate against (18.2%) chloramphenicol, 3 isolate against (27.2%) erythromycin, 4 isolate against (36.3%) oxytetracycline and 4 isolate against (36.3%) penicillin G, 6 isolate against (54.5%) tetracycline and 3 isolate against (27.2%) vancomycin was resistant in 11 L. monocytogenes isolates that confirmed by PCR. The L. monocytogenes isolates were found to be resistant to one or more antibiotics in antibiotic-resistance test results. In conclusion, applying of national residue monitoring program by official authority for prevention of intensive antibiotic use in order to prevent the development of resistant strains to antibiotics has great importance.


Journal of Animal and Veterinary Advances | 2010

Effects of lactic acid and chitosan on the survival of V. parahaemolyticus in mussel samples.

Göknur Terzi; Ali Gücükoğlu


European Food Research and Technology | 2010

The effect of different starter cultures and ripening temperatures on formation of biogenic amine in Turkish fermented sausages

Ali Gücükoğlu; Özlem Küplülü


Su Ürünleri Dergisi | 2015

Assessment of Heavy Metals (Cadmium and Lead) in Vacuum Packaged Smoked Fish Species (Mackerel, Salmo salar and Oncorhynhus mykiss) Marketed in Ankara (Turkey).

U. Tansel Şireli; Muammer Goncuoglu; Yeliz Yildirim; Ali Gücükoğlu; Ömer Çakmak


Journal of Animal and Veterinary Advances | 2011

Aflatoxin M1 Contamination of Ice Cream in Samsun, Turkey

Özgür Çadirci; Ali Gücükoğlu; Necati Ozpinar; Göknur Terzi; Mustafa Alişarlı


Journal of Food Safety | 2018

Enterotoxigenic structures of Bacillus cereus strains isolated from ice creams

Özgür Çadirci; Ali Gücükoğlu; Göknur Terzi Gülel; Tolga Uyanik

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Göknur Terzi

Ondokuz Mayıs University

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Tolga Uyanik

Ondokuz Mayıs University

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Mustafa Sunbul

Ondokuz Mayıs University

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T. Onur Kevenk

Ondokuz Mayıs University

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