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Dive into the research topics where Alison Baker is active.

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Featured researches published by Alison Baker.


Molecular Therapy | 2008

Enhanced lung gene expression after aerosol delivery of concentrated pDNA/PEI complexes.

Lee A. Davies; Gerry McLachlan; Stephanie G. Sumner-Jones; David J. P. Ferguson; Alison Baker; Peter Tennant; Catherine Gordon; Christina Vrettou; Eilidh Baker; Jie Zhu; Eric W. F. W. Alton; David Collie; David J. Porteous; Stephen C. Hyde; Deborah R. Gill

A major limitation of many self-assembling nonviral gene transfer formulations is that they are commonly prepared at relatively low component concentrations. While this typically has little impact on their use in cell culture, it can severely limit the progress of in vivo studies. In order to overcome this, we have developed a simple, scalable, pharmaceutically acceptable concentration method that has allowed us to increase the concentration of a commonly used pDNA/PEI formulation from 0.2 to >8 mg/ml plasmid DNA (pDNA). Crucially, the concentration method was found to have only minimal impact on the electrostatic properties or size of the pDNA/PEI particles. When delivered as an aerosol to the mouse lung, the concentrated pDNA/PEI formulations resulted in a 15-fold increase in lung reporter gene expression, with minimal impact in terms of inflammation or toxicity. Importantly, this performance advantage was replicated after aerosol administration to sheep lungs, with reporter gene expression being similarly approximately 15-fold higher than with the conventional pDNA/PEI formulation, and lung inflammation falling to background levels. These findings demonstrate that concentrated pDNA/PEI formulations offer increased aerosol gene transfer with decreased inflammatory sequelae, and represent a promising advance in the field of nonviral lung gene transfer. It seems likely that similar benefits might be achievable with alternative delivery routes and with other nonviral formulations.


Journal of Gene Medicine | 2007

Electroporation enhances reporter gene expression following delivery of naked plasmid DNA to the lung

Ian A. Pringle; Gerry McLachlan; David Collie; Stephanie G. Sumner-Jones; Anna E. Lawton; Peter Tennant; Alison Baker; Catherine Gordon; R. Blundell; Anusha Varathalingam; Lee A. Davies; Ralph A. Schmid; Seng H. Cheng; David J. Porteous; Deborah R. Gill; Stephen C. Hyde

Existing methods of non‐viral airway gene transfer suffer from low levels of efficiency. Electroporation has been used to enhance gene transfer in a range of tissues. Here we assess the usefulness of electroporation for enhancing gene transfer in the lungs of mice and sheep.


Molecular Therapy | 2003

Transfection efficiency and toxicity following delivery of naked plasmid DNA and cationic lipid–DNA complexes to ovine lung segments

Michael Emerson; Louise Renwick; Stephen Tate; Susan Rhind; Elspeth Milne; Hazel Painter; A. Christopher Boyd; Gerry McLachlan; U Griesenbach; Seng H. Cheng; Deborah R. Gill; Stephen C. Hyde; Alison Baker; Eric W. F. W. Alton; David J. Porteous; David Collie

We defined, using a novel large animal model system, the acute pathologic response to localized pulmonary administration of either naked plasmid DNA (pDNA) or cationic lipid-pDNA complexes (pDNA:GL67) and related such responses to concomitant indicators of transfection efficiency, namely levels of chloramphenicol acetyl transferase (CAT) protein and mRNA in specific lung tissue compartments. We instilled doses of 0.2, 1, and 5 mg pDNA to spatially distinct lung segments in six anesthetized sheep and doses of 0.2, 1, and 5 mg pDNA:GL67 to a further six sheep. Twenty-four hours after gene delivery the sheep were euthanized and necropsy examination with sampling of relevant tissues was carried out. Levels of plasmid-derived CAT-specific mRNA and CAT protein in samples derived from segments treated with either pDNA or pDNA:GL67 increased in relation to the administered dose. Levels of mRNA and protein expression were greater for pDNA:GL67 than for pDNA alone. A significant correlation was observed between mRNA and protein expression in samples derived from airways treated with pDNA:GL67. Histopathological changes following administration of both pDNA and pDNA:GL67 were characterized by a neutrophilic inflammation predominantly oriented on airways. The severity of the inflammatory response appeared to correlate with the administered dose of DNA and was generally more severe for pDNA:GL67.


Journal of Virology | 2008

Role of Alveolar Macrophages in Respiratory Transmission of Visna/Maedi Virus

Tom N. McNeilly; Alison Baker; Jeremy K. Brown; David Collie; Gerry MacLachlan; Susan Rhind; Gordon D. Harkiss

ABSTRACT A major route of transmission of Visna/maedi virus (VMV), an ovine lentivirus, is thought to be via the respiratory tract, by inhalation of either cell-free or cell-associated virus. In previous studies, we have shown that infection via the lower respiratory tract is much more efficient than via upper respiratory tissues (T. N. McNeilly, P. Tennant, L. Lujan, M. Perez, and G. D. Harkiss, J. Gen. Virol. 88:670-679, 2007). Alveolar macrophages (AMs) are prime candidates for the initial uptake of virus in the lower lung, given their in vivo tropism for VMV, abundant numbers, location within the airways, and role in VMV-induced inflammation. Furthermore, AMs are the most likely cell type involved in the transmission of cell-associated virus. In this study, we use an experimental in vivo infection model that allowed the infection of specific segments of the ovine lung. We demonstrate that resident AMs are capable of VMV uptake in vivo and that this infection is associated with a specific up-regulation of AM granulocyte-macrophage colony-stimulating factor mRNA expression (P < 0.05) and an increase in bronchoalveolar lymphocyte numbers (P < 0.05), but not a generalized inflammatory response 7 days postinfection. We also demonstrate that both autologous and heterologous VMV-infected AMs are capable of transmitting virus after lower, but not upper, respiratory tract instillation and that this transfer of virus appears not to involve the direct migration of virus-infected AMs from the airspace. These results suggest that virus is transferred from AMs into the body via an intermediate route. The results also suggest that the inhalation of infected AMs represents an additional mechanism of virus transmission.


Biomaterials | 2011

Secreted Gaussia luciferase as a sensitive reporter gene for in vivo and ex vivo studies of airway gene transfer

Uta Griesenbach; Catarina C. Vicente; Megan J. Roberts; Cuixiang Meng; Samia Soussi; Stefania Xenariou; Peter Tennant; Alison Baker; Eilidh Baker; Catherine Gordon; Christina Vrettou; Dominique McCormick; Rebecca Coles; Anne-Marie Green; Anna E. Lawton; Stephanie G. Sumner-Jones; Seng H. Cheng; Ronald K. Scheule; Stephen C. Hyde; Deborah R. Gill; David D. Collie; Gerry McLachlan; Eric W. F. W. Alton

The cationic lipid GL67A is one of the more efficient non-viral gene transfer agents (GTAs) for the lungs, and is currently being evaluated in an extensive clinical trial programme for cystic fibrosis gene therapy. Despite conferring significant expression of vector-specific mRNA following transfection of differentiated human airway cells cultured on air liquid interfaces (ALI) cultures and nebulisation into sheep lung in vivo we were unable to detect robust levels of the standard reporter gene Firefly luciferase (FLuc). Recently a novel secreted luciferase isolated from Gaussia princeps (GLuc) has been described. Here, we show that (1) GLuc is a more sensitive reporter gene and offers significant advantages over the traditionally used FLuc in pre-clinical models for lung gene transfer that are difficult to transfect, (2) GL67A-mediated gene transfection leads to significant production of recombinant protein in these models, (3) promoter activity in ALI cultures mimics published in vivo data and these cultures may, therefore, be suitable to characterise promoter activity in a human ex vivo airway model and (4) detection of GLuc in large animal broncho-alveolar lavage fluid and serum facilitates assessment of duration of gene expression after gene transfer to the lungs. In summary, we have shown here that GLuc is a sensitive reporter gene and is particularly useful for monitoring gene transfer in difficult to transfect models of the airway and lung. This has allowed us to validate that GL67A, which is currently in clinical use, can generate significant amounts of recombinant protein in fully differentiated human air liquid interface cultures and the ovine lung in vivo.


Biomaterials | 2013

The safety profile of a cationic lipid-mediated cystic fibrosis gene transfer agent following repeated monthly aerosol administration to sheep.

Eric W. F. W. Alton; Alison Baker; Eilidh Baker; A. Christopher Boyd; Seng H. Cheng; Rebecca Coles; David Collie; Heather E Davidson; Jane C. Davies; Deborah R. Gill; Catherine Gordon; Uta Griesenbach; T Higgins; Stephen C. Hyde; J. Alastair Innes; Dominique McCormick; Michael McGovern; Gerry McLachlan; David J. Porteous; Ian A. Pringle; Ronald K. Scheule; Darren Shaw; Sionagh Smith; Stephanie G. Sumner-Jones; Peter Tennant; Christina Vrettou

Clinically effective gene therapy for Cystic Fibrosis has been a goal for over 20 years. A plasmid vector (pGM169) that generates persistent expression and reduced host inflammatory responses in mice has raised prospects for translation to the clinic. The UK CF Gene Therapy Consortium is currently evaluating long-term repeated delivery of pGM169 complexed with the cationic lipid GL67A in a large Multidose Trial. This regulatory-compliant evaluation of aerosol administration of nine doses of pGM169/GL67A at monthly intervals, to the sheep lung, was performed in preparation for the Multidose Trial. All sheep tolerated treatment well with no adverse effects on haematology, serum chemistry, lung function or histopathology. Acute responses were observed in relation to bronchoalveolar cellularity comprising increased neutrophils and macrophage numbers 1 day post-delivery but these increases were transient and returned to baseline. Importantly there was no cumulative inflammatory effect or lung remodelling with successive doses. Molecular analysis confirmed delivery of pGM169 DNA to the airways and pGM169-specific mRNA was detected in bronchial brushing samples at day 1 following doses 1, 5 and 9. In conclusion, nine doses of pGM169/GL67A were well tolerated with no significant evidence of toxicity that would preclude adoption of a similar strategy in CF patients.


Gene Therapy | 2011

Validation of recombinant Sendai virus in a non-natural host model

Uta Griesenbach; Gerry McLachlan; Toshiyuki Owaki; Lucinda Somerton; T. Shu; Alison Baker; Peter Tennant; Catherine Gordon; Christina Vrettou; Eilidh Baker; David Collie; Mamoru Hasegawa; Eric W. F. W. Alton

We have previously shown that recombinant Sendai virus (SeV) vector, derived from murine parainfluenza virus, is one of the most efficient vectors for airway gene transfer. We have also shown that SeV-mediated transfection on second administration, although reduced by 60% when compared with levels achieved after a single dose, is still high because of the efficient transfection achieved by SeV vector in murine airways. Here, we show that these levels further decrease on subsequent doses. In addition, we validated SeV vector repeat administration in a non-natural host model, the sheep. As part of these studies we first assessed viral stability in a Pari LC Plus nebuliser, a polyethylene catheter (PEC) and the Trudell AeroProbe. We also compared the distribution of gene expression after PEC and Trudell AeroProbe administration and quantified virus shedding after sheep transduction. In addition, we show that bronchial brushings and biopsies, collected in anaesthetized sheep, can be used to assess SeV-mediated gene expression over time. Similar to mice, gene expression in sheep was transient and had returned to baseline values by day 14. In conclusion, the SeV vector should be strongly considered for lung-related applications requiring a single administration of the vector even though it might not be suitable for diseases requiring repeat administration.


Molecular Therapy | 2007

Optimizing Aerosol Gene Delivery and Expression in the Ovine Lung

Gerry McLachlan; Alison Baker; Peter Tennant; Catherine Gordon; Christina Vrettou; Louise Renwick; R. Blundell; Seng H. Cheng; Ron Scheule; Lee A. Davies; Hazel Painter; Rebecca Coles; Anna E. Lawton; Christopher Marriott; Deborah R. Gill; Stephen C. Hyde; Uta Griesenbach; Eric W. F. W. Alton; A. Christopher Boyd; David J. Porteous; David Collie


FEBS Journal | 1989

Two genes encode the adenine nucleotide translocator of maize mitochondria. Isolation, characterisation and expression of the structural genes

Brian Bathgate; Alison Baker; Christopher J. Leaver


Research in Veterinary Science | 1999

Ovine bronchoalveolar lavage cellularity: reproducibility and the effect of multiple repeated lavage☆

David Collie; Alison Baker; Sandra Mauchline; David J. Porteous; Gerry McLachlan

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David Collie

University of Edinburgh

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Eric W. F. W. Alton

National Institutes of Health

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Eilidh Baker

University of Edinburgh

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