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Dive into the research topics where Alison L. Clarke is active.

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Featured researches published by Alison L. Clarke.


Proceedings of the National Academy of Sciences of the United States of America | 2007

Reduced cortical inhibition in a mouse model of familial childhood absence epilepsy

Heneu O. Tan; Christopher A. Reid; Frank Nicolai Single; Philip J. Davies; Cindy Chiu; Susan M. Murphy; Alison L. Clarke; Leanne M. Dibbens; Heinz Eric Krestel; John C. Mulley; Mathew V. Jones; Peter H. Seeburg; Bert Sakmann; Samuel F. Berkovic; Rolf Sprengel; Steven Petrou

Mutations in the GABAA receptor γ2 subunit are associated with childhood absence epilepsy and febrile seizures. To understand better the molecular basis of absence epilepsy in man, we developed a mouse model harboring a γ2 subunit point mutation (R43Q) found in a large Australian family. Mice heterozygous for the mutation demonstrated behavioral arrest associated with 6-to 7-Hz spike-and-wave discharges, which are blocked by ethosuximide, a first-line treatment for absence epilepsy in man. Seizures in the mouse showed an abrupt onset at around age 20 days corresponding to the childhood nature of this disease. Reduced cell surface expression of γ2(R43Q) was seen in heterozygous mice in the absence of any change in α1 subunit surface expression, ruling out a dominant-negative effect. GABAA-mediated synaptic currents recorded from cortical pyramidal neurons revealed a small but significant reduction that was not seen in the reticular or ventrobasal thalamic nuclei. We hypothesize that a subtle reduction in cortical inhibition underlies childhood absence epilepsy seen in humans harboring the R43Q mutation.


Journal of Biological Chemistry | 2006

A thr357 to ser polymorphism in homozygous and compound heterozygous subjects causes absent or reduced P2X7 function and impairs atp-induced mycobacterial killing by macrophages

Anne N. Shemon; Ronald Sluyter; Suran L. Fernando; Alison L. Clarke; Lan-Phuong Dao-Ung; Kristen K. Skarratt; Bernadette M. Saunders; Khai See Tan; Ben J. Gu; Stephen J. Fuller; Warwick J. Britton; Steven Petrou; James S. Wiley

The P2X7 receptor is a ligand-gated cation channel that is highly expressed on mononuclear leukocytes and that mediates ATP-induced apoptosis and killing of intracellular pathogens. There is a wide variation in P2X7 receptor function between subjects, explained in part by four loss-of-function polymorphisms (R307Q, E496A, I568N, and a 5′-intronic splice site polymorphism), as well as rare mutations. In this study, we report the allele frequencies of 11 non-synonymous P2X7 polymorphisms and describe a fifth loss-of-function polymorphism in the gene (1096C → G), which changes Thr357 to Ser (T357S) with an allele frequency of 0.08 in the Caucasian population. P2X7 function was measured by ATP-induced ethidium+ influx into peripheral blood lymphocytes and monocytes and, when compared with wild-type subjects, was reduced to 10–65% in heterozygotes, 1–18% in homozygotes, and 0–10% in compound heterozygotes carrying T357S and a second loss-of-function polymorphism. Overexpression of the T357S mutant P2X7 in either HEK-293 cells or Xenopus oocytes gave P2X7 function of ∼50% that of wild-type constructs. Differentiation of monocytes to macrophages, which also up-regulates P2X7, restored P2X7 function to near normal in cells heterozygous for T357S and to a value 50–65% of wild-type in cells homozygous for T357S or compound heterozygous for T357S/E496A. However, macrophages from subjects that are compound heterozygous for either T357S/R307Q or T357S/stop codon had near-to-absent P2X7 function. These functional deficits induced by T357S were paralleled by impaired ATP-induced apoptosis and mycobacteria killing in macrophages from these subjects. Lymphocytes, monocytes, and macrophages from subjects homozygous for T357S or compound heterozygous for T357S and a second loss-of-function allele have reduced or absent P2X7 receptor function.


Neurology | 2014

GABRA1 and STXBP1: Novel genetic causes of Dravet syndrome

Gemma L. Carvill; Sarah Weckhuysen; Jacinta M. McMahon; Corinna Hartmann; Rikke S. Møller; Helle Hjalgrim; Joseph Cook; Eileen Geraghty; Brian J. O'Roak; Steven Petrou; Alison L. Clarke; Deepak Gill; Lynette G. Sadleir; Hiltrud Muhle; Sarah von Spiczak; Marina Nikanorova; Bree L. Hodgson; Elena V. Gazina; Arvid Suls; Jay Shendure; Leanne M. Dibbens; Ingo Helbig; Samuel F. Berkovic; Ingrid E. Scheffer; Mefford Hc

Objective: To determine the genes underlying Dravet syndrome in patients who do not have an SCN1A mutation on routine testing. Methods: We performed whole-exome sequencing in 13 SCN1A-negative patients with Dravet syndrome and targeted resequencing in 67 additional patients to identify new genes for this disorder. Results: We detected disease-causing mutations in 2 novel genes for Dravet syndrome, with mutations in GABRA1 in 4 cases and STXBP1 in 3. Furthermore, we identified 3 patients with previously undetected SCN1A mutations, suggesting that SCN1A mutations occur in even more than the currently accepted ∼75% of cases. Conclusions: We show that GABRA1 and STXBP1 make a significant contribution to Dravet syndrome after SCN1A abnormalities have been excluded. Our results have important implications for diagnostic testing, clinical management, and genetic counseling of patients with this devastating disorder and their families.


Journal of Pharmacology and Experimental Therapeutics | 2006

The Mechanism of Carbamazepine Aggravation of Absence Seizures

Lige Liu; Thomas Zheng; Margaret J. Morris; Cm Wallengren; Alison L. Clarke; Christopher A. Reid; Steven Petrou; Terence J. O'Brien

Carbamazepine (CBZ) aggravates many generalized seizures types, particularly absence seizures, but the mechanisms underlying this are poorly understood. GABA signaling within the reticular nucleus (Rt) and the ventrobasal complex (VB) of the thalamus is critical to the neurophysiology of absence seizures. The hypothesis that CBZ aggravates absence seizures by acting at the VB thalamus via a GABAA receptor-mediated mechanism was investigated in a genetic rat model, generalized absence epilepsy rats from Strasbourg (GAERS). Seizure activity was quantified by a 90-min electroencephalogram recording postdrug injection. Intracerebroventricular injections of CBZ (15 μg in 4 μl) resulted in seizure aggravation versus vehicle treatment, with a mean increase in seizure time of 40%. This indicates that CBZ acts directly, rather than via a metabolite, on the brain to aggravate seizures. Seizure aggravation also occurred following bilateral microinjection of CBZ (0.75 μg in 0.2 μl) into the VB (53%) but not following injection into the Rt (–9%). However, seizure aggravation was blocked when the GABAA receptor antagonist, bicuculline (BIC, 0.04 μg in 0.2 μl), was coinjected with CBZ into the VB. Injection of BIC alone (versus vehicle) into the VB also blocked seizure aggravation following systemic administration of CBZ (15 mg/kg i.p.). In vitro studies in Xenopus oocytes expressing recombinant GABAA receptors demonstrated that CBZ produced a dose-dependent potentiation of the GABA current at a physiological relevant concentration range (1–100 μM). These data demonstrate that CBZ acts at the VB thalamus to aggravate absence seizures in GAERS and that activation of GABAA receptors is critical to this effect.


Annals of Neurology | 2010

Augmented currents of an HCN2 variant in patients with febrile seizure syndromes

Leanne M. Dibbens; Christopher A. Reid; Bree L. Hodgson; Evan A. Thomas; Alison M. Phillips; Elena V. Gazina; Brett A. Cromer; Alison L. Clarke; Tallie Z. Baram; Ingrid E. Scheffer; Samuel F. Berkovic; Steven Petrou

The genetic architecture of common epilepsies is largely unknown. HCNs are excellent epilepsy candidate genes because of their fundamental neurophysiological roles. Screening in subjects with febrile seizures and genetic epilepsy with febrile seizures plus revealed that 2.4% carried a common triple proline deletion (delPPP) in HCN2 that was seen in only 0.2% of blood bank controls. Currents generated by mutant HCN2 channels were ∼35% larger than those of controls; an effect revealed using automated electrophysiology and an appropriately powered sample size. This is the first association of HCN2 and familial epilepsy, demonstrating gain of function of HCN2 current as a potential contributor to polygenic epilepsy. ANN NEUROL 2010;67:542–546


Biochemical and Biophysical Research Communications | 2003

Glucose transporter GLUT12-functional characterization in Xenopus laevis oocytes

Suzanne Rogers; Jenalle D. Chandler; Alison L. Clarke; Steven Petrou; James D. Best

We have recently identified and cloned the cDNA of a new member of the glucose transporter family that has been designated GLUT12. GLUT12 possesses the structural features critical to facilitative transport of glucose but the key to understanding the possible physiological roles of this novel protein requires analysis of functional glucose transport. In the current study, we have utilized the Xenopus laevis oocyte expression system to assay transport of the glucose analog 2-deoxy-D-glucose and characterize the glucose transport properties and hexose affinities of GLUT12. Our results demonstrate that GLUT12 facilitates transport of glucose with an apparent preferential substrate affinity for glucose over other hexoses assayed. The results are significant to understanding the potential role and importance of GLUT12 in insulin-sensitive tissues and also cells with high glucose utilization such as cancer cells.


The FASEB Journal | 2002

Fatty acid augmentation of the cardiac slowly activating delayed rectifier current (IKs) is conferred by hminK.

Gavin K. Doolan; Rekha G. Panchal; Eva L. Fonnes; Alison L. Clarke; David A. Williams; Steven Petrou

The mechanism by which dietary fatty acids confer protection against cardiac arrhythmias and sudden cardiac death is not resolved. Here, we study the effects of several known cardioprotective and arrhythmogenic fatty acids on the slowly activating delayed rectifier potassium current (IKs), which is responsible for the repolarization phase of the cardiac action potential. cRNAs encoding either or both of the two subunits, KvLQT1 and hminK, that together produce IKs, were injected into Xenopus oocytes, and the effects of various fatty acids were determined. Docosahexaenoic acid (DHA) significantly augmented IKs as did the short‐chained fully saturated lauric acid, and to a lesser extent the cis‐unsaturated oleic acid. Eicosapentaenoic acid (EPA) was without significant effect on current magnitude, although it reduced the rate of activation. These results suggest that not all “antiarrhythmic” fatty acids target the same channel. To examine the role of hminK in this response, KvLQT1 was expressed alone. In this case, DHA, lauric acid, and oleic acid did not augment current, suggesting that hminK confers fatty acid sensitivity to IKs.


Epilepsia | 2009

Oxcarbazepine, not its active metabolite, potentiates GABAA activation and aggravates absence seizures

Thomas Zheng; Alison L. Clarke; Margaret J. Morris; Christopher A. Reid; Steven Petrou; Terence J. O'Brien

Purpose:  Studies in genetic absence epileptic rats from Strasbourg (GAERS) indicate that enhancement of γ aminobutyric acid (GABAA) receptor activity is a critical mechanism in the aggravation of seizures by carbamazepine (CBZ). We examined whether structural analogs of CBZ, oxcarbazepine (OXC), and its active metabolite, monohydroxy derivative (MHD), also potentiate GABAA receptor current and aggravate seizures.


Journal of Biological Chemistry | 2004

An Arg307 to Gln Polymorphism within the ATP-binding Site Causes Loss of Function of the Human P2X7 Receptor

Ben J. Gu; Ronald Sluyter; Kristen K. Skarratt; Anne N. Shemon; Lan-Phuong Dao-Ung; Stephen J. Fuller; Julian A. Barden; Alison L. Clarke; Steven Petrou; James S. Wiley


American Journal of Physiology-cell Physiology | 2002

Modulation of BKCa channel activity by fatty acids: structural requirements and mechanism of action

Alison L. Clarke; Steven Petrou; John V. Walsh; Joshua J. Singer

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Christopher A. Reid

Florey Institute of Neuroscience and Mental Health

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Leanne M. Dibbens

University of South Australia

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Bree L. Hodgson

University of South Australia

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Ben J. Gu

Florey Institute of Neuroscience and Mental Health

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James S. Wiley

Florey Institute of Neuroscience and Mental Health

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