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Dive into the research topics where Allan Hanbury is active.

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Featured researches published by Allan Hanbury.


acm multimedia | 2010

Affective image classification using features inspired by psychology and art theory

Jana Machajdik; Allan Hanbury

Images can affect people on an emotional level. Since the emotions that arise in the viewer of an image are highly subjective, they are rarely indexed. However there are situations when it would be helpful if images could be retrieved based on their emotional content. We investigate and develop methods to extract and combine low-level features that represent the emotional content of an image, and use these for image emotion classification. Specifically, we exploit theoretical and empirical concepts from psychology and art theory to extract image features that are specific to the domain of artworks with emotional expression. For testing and training, we use three data sets: the International Affective Picture System (IAPS); a set of artistic photography from a photo sharing site (to investigate whether the conscious use of colors and textures displayed by the artists improves the classification); and a set of peer rated abstract paintings to investigate the influence of the features and ratings on pictures without contextual content. Improved classification results are obtained on the International Affective Picture System (IAPS), compared to state of the art work.


BMC Medical Imaging | 2015

Metrics for evaluating 3D medical image segmentation: analysis, selection, and tool.

Abdel Aziz Taha; Allan Hanbury

BackgroundMedical Image segmentation is an important image processing step. Comparing images to evaluate the quality of segmentation is an essential part of measuring progress in this research area. Some of the challenges in evaluating medical segmentation are: metric selection, the use in the literature of multiple definitions for certain metrics, inefficiency of the metric calculation implementations leading to difficulties with large volumes, and lack of support for fuzzy segmentation by existing metrics.ResultFirst we present an overview of 20 evaluation metrics selected based on a comprehensive literature review. For fuzzy segmentation, which shows the level of membership of each voxel to multiple classes, fuzzy definitions of all metrics are provided. We present a discussion about metric properties to provide a guide for selecting evaluation metrics. Finally, we propose an efficient evaluation tool implementing the 20 selected metrics. The tool is optimized to perform efficiently in terms of speed and required memory, also if the image size is extremely large as in the case of whole body MRI or CT volume segmentation. An implementation of this tool is available as an open source project.ConclusionWe propose an efficient evaluation tool for 3D medical image segmentation using 20 evaluation metrics and provide guidelines for selecting a subset of these metrics that is suitable for the data and the segmentation task.


Pattern Recognition Letters | 2012

Color based skin classification

Rehanullah Khan; Allan Hanbury; Julian Stöttinger; Abdul Bais

Skin detection is used in applications ranging from face detection, tracking body parts and hand gesture analysis, to retrieval and blocking objectionable content. In this paper, we investigate and evaluate (1) the effect of color space transformation on skin detection performance and finding the appropriate color space for skin detection, (2) the role of the illuminance component of a color space, (3) the appropriate pixel based skin color modeling technique and finally, (4) the effect of color constancy algorithms on color based skin classification. The comprehensive color space and skin color modeling evaluation will help in the selection of the best combinations for skin detection. Nine skin modeling approaches (AdaBoost, Bayesian network, J48, Multilayer Perceptron, Naive Bayesian, Random Forest, RBF network, SVM and the histogram approach of Jones and Rehg (2002)) in six color spaces (IHLS, HSI, RGB, normalized RGB, YCbCr and CIELAB) with the presence or absence of the illuminance component are compared and evaluated. Moreover, the impact of five color constancy algorithms on skin detection is reported. Results on a database of 8991 images with manually annotated pixel-level ground truth show that (1) the cylindrical color spaces outperform other color spaces, (2) the absence of the illuminance component decreases performance, (3) the selection of an appropriate skin color modeling approach is important and that the tree based classifiers (Random forest, J48) are well suited to pixel based skin detection. As a best combination, the Random Forest combined with the cylindrical color spaces, while keeping the illuminance component outperforms other combinations, and (4) the usage of color constancy algorithms can improve skin detection performance.


british machine vision conference | 2001

Mathematical Morphology in the HLS Colour Space

Allan Hanbury; Jean Serra

The HLS colour space is widely used in image analysis as it is physically intuitive. As the hue component of this space is defined on the unit circle, standard greyscale image analysis operators, specifically morphological operators, are not applicable to it. A variation of the standard morphological operators which require the choice of an origin are discussed. In addition, some lexicographical vector orders, which allow mathematical morphology to be used in the HLS space, are presented. Included in these is a new saturationweighted hue order, which takes hue and saturation into account simultaneously.


Genome Medicine | 2016

Making sense of big data in health research: Towards an EU action plan

Charles Auffray; Rudi Balling; Inês Barroso; László Bencze; Mikael Benson; Jay Bergeron; Enrique Bernal-Delgado; Niklas Blomberg; Christoph Bock; Ana Conesa; Susanna Del Signore; Christophe Delogne; Peter Devilee; Alberto Di Meglio; Marinus J.C. Eijkemans; Paul Flicek; Norbert Graf; Vera Grimm; Henk-Jan Guchelaar; Yike Guo; Ivo Gut; Allan Hanbury; Shahid Hanif; Ralf Dieter Hilgers; Ángel Honrado; D. Rod Hose; Jeanine J. Houwing-Duistermaat; Tim Hubbard; Sophie Helen Janacek; Haralampos Karanikas

Medicine and healthcare are undergoing profound changes. Whole-genome sequencing and high-resolution imaging technologies are key drivers of this rapid and crucial transformation. Technological innovation combined with automation and miniaturization has triggered an explosion in data production that will soon reach exabyte proportions. How are we going to deal with this exponential increase in data production? The potential of “big data” for improving health is enormous but, at the same time, we face a wide range of challenges to overcome urgently. Europe is very proud of its cultural diversity; however, exploitation of the data made available through advances in genomic medicine, imaging, and a wide range of mobile health applications or connected devices is hampered by numerous historical, technical, legal, and political barriers. European health systems and databases are diverse and fragmented. There is a lack of harmonization of data formats, processing, analysis, and data transfer, which leads to incompatibilities and lost opportunities. Legal frameworks for data sharing are evolving. Clinicians, researchers, and citizens need improved methods, tools, and training to generate, analyze, and query data effectively. Addressing these barriers will contribute to creating the European Single Market for health, which will improve health and healthcare for all Europeans.


MCBR-CDS'12 Proceedings of the Third MICCAI international conference on Medical Content-Based Retrieval for Clinical Decision Support | 2012

VISCERAL: towards large data in medical imaging -- challenges and directions

Georg Langs; Allan Hanbury; Bjoern H. Menze; Henning Müller

The increasing amount of medical imaging data acquired in clinical practice holds a tremendous body of diagnostically relevant information. Only a small portion of these data are accessible during clinical routine or research due to the complexity, richness, high dimensionality and size of the data. There is consensus in the community that leaps in this regard are hampered by the lack of large bodies of data shared across research groups and an associated definition of joint challenges on which development can focus. In this paper we describe the objectives of the project VISCERAL. It will provide the means to jump---start this process by providing access to unprecedented amounts of real world imaging data annotated through experts and by using a community effort to generate a large corpus of automatically generated standard annotations. To this end, Visceral will conduct two competitions that tackle large scale medical image data analysis in the fields of anatomy detection, and content---based image retrieval, in this case the retrieval of similar medical cases using visual data and textual radiology reports.


international conference on image processing | 2010

Skin detection: A random forest approach

Rehanullah Khan; Allan Hanbury; Julian Stoettinger

Skin detection is used in applications ranging from face detection, tracking body parts and hand gesture analysis, to retrieval and blocking objectionable content. For robust skin segmentation and detection, we investigate color classification based on random forest. A random forest is a statistical framework with a very high generalization accuracy and quick training times. The random forest approach is used with the IHLS color space for raw pixel based skin detection. We evaluate random forest based skin detection and compare it to Bayesian network, Multilayer Perceptron, SVM, AdaBoost, Naive Bayes and RBF network. Results on a database of 8991 images with manually annotated pixel-level ground truth show that with the IHLS color space, the random forest approach outperforms other approaches. We also show the effect of increasing the number of trees grown for random forest. With fewer trees we get faster training times and with 10 trees we get the highest F-score.


Pattern Recognition Letters | 2008

Constructing cylindrical coordinate colour spaces

Allan Hanbury

A cylindrical coordinate colour space (lightness, saturation/chroma, hue) is derived from an opponent colour space in the RGB space. It is shown how cylindrical coordinate colour models widely used in the literature are related to or can be reduced to the derived model, thereby contributing to creating a unified cylindrical coordinate colour model. In particular, the widely used saturation expression max(R,G,B)-min(R,G,B) is derived from the proposed model. Properties of the derived chroma and saturation expressions are examined. Finally, some applications of cylindrical coordinate colour spaces are briefly reviewed.


cross-language evaluation forum | 2006

Overview of the ImageCLEF 2006 photographic retrieval and object annotation tasks

Paul D. Clough; Michael Grubinger; Thomas Deselaers; Allan Hanbury; Henning Müller

This paper describes the general photographic retrieval and object annotation tasks of the ImageCLEF 2006 evaluation campaign. These tasks provided both the resources and the framework necessary to perform comparative laboratory-style evaluation of visual information systems for image retrieval and automatic image annotation. Both tasks offered something new for 2006 and attracted a large number of submissions: 12 groups participated in ImageCLEFphoto and 3 groups in the automatic annotation task. This paper summarises these two tasks including collections used in the benchmark, the tasks proposed, a summary of submissions from participating groups and the main findings.


european conference on computer vision | 2004

The Isophotic Metric and Its Application to Feature Sensitive Morphology on Surfaces

Helmut Pottmann; Tibor Steiner; Michael Hofer; Christoph Haider; Allan Hanbury

We introduce the isophotic metric, a new metric on surfaces, in which the length of a surface curve is not just dependent on the curve itself, but also on the variation of the surface normals along it. A weak variation of the normals brings the isophotic length of a curve close to its Euclidean length, whereas a strong normal variation increases the isophotic length. We actually have a whole family of metrics, with a parameter that controls the amount by which the normals influence the metric. We are interested here in surfaces with features such as smoothed edges, which are characterized by a significant deviation of the two principal curvatures. The isophotic metric is sensitive to those features: paths along features are close to geodesics in the isophotic metric, paths across features have high isophotic length. This shape effect makes the isophotic metric useful for a number of applications. We address feature sensitive image processing with mathematical morphology on surfaces, feature sensitive geometric design on surfaces, and feature sensitive local neighborhood definition and region growing as an aid in the segmentation process for reverse engineering of geometric objects.

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Mihai Lupu

Vienna University of Technology

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Henning Müller

University of Applied Sciences Western Switzerland

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Florina Piroi

Vienna University of Technology

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João R. M. Palotti

Vienna University of Technology

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Georg Langs

Medical University of Vienna

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Aldo Lipani

Vienna University of Technology

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Navid Rekabsaz

Vienna University of Technology

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Linda Andersson

Vienna University of Technology

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Guido Zuccon

Queensland University of Technology

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