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Dive into the research topics where Alvin N. Setiawan is active.

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Featured researches published by Alvin N. Setiawan.


Waterbirds | 2004

The Use of Morphometric Measurements to Sex Yellow-eyed Penguins

Alvin N. Setiawan; John T. Darby; David Martin Lambert

Abstract The Yellow-eyed Penguin (Megadyptes antipodes) is monomorphic but exhibits subtle sexual morphometric dimorphism. Information on the sexes of these birds is needed for informed management of the species and the construction of accurate population models. Using DNA analysis and Discriminant Function Analysis on head and foot measurements, we tested whether adults and fledglings of Yellow-eyed Penguin can be sexed using morphometry. We found that head and foot measurements can be used to correctly sex up to 93% of adults. Using only foot length, 88% of fledglings can be sexed accurately. As age until fledging was found to have an effect on morphometric variables, sexing should be conducted as synchronized as possible when chicks are over 90 days of age. We recommend that error rates inherent in sexing fledglings be taken into account when publishing sex-ratio data and subsequent analyses, particularly when age of fledglings could not be determined. The use of whole-skull measurements for sexing may be useful in other species in which bill measurements between the sexes are only slightly dimorphic or contains large degrees of overlap.


BMC Molecular Biology | 2010

The use of reference gene selection programs to study the silvering transformation in a freshwater eel Anguilla australis: a cautionary tale

Alvin N. Setiawan; P. Mark Lokman

BackgroundQuantitative real-time PCR (qPCR) has been the method of choice for the quantification of mRNA. Due to the various artifactual factors that may affect the accuracy of qPCR, internal reference genes are most often used to normalize qPCR data. Recently, many studies have employed computer programs such as GeNorm, BestKeeper and NormFinder in selecting reference genes, but very few statistically validate the outcomes of these programs. Thus, in this study, we selected reference genes for qPCR of liver and ovary samples of yellow (juvenile), migratory (silver) and 11-KT treated juveniles of New Zealand shortfinned eels (Anguilla australis) using the three computer programs and validate the selected genes statistically using REST 2009 software and the Mann-Whitney test. We also tested for the repeatability of use for the best reference genes by applying them to a data set obtained in a similar experiment conducted the previous year.ResultsOut of six candidate genes, the combination of 18 s and eef1 was found to be the best statistically validated reference for liver, while in ovary it was l36. However, discrepancies in gene rankings were found between the different programs. Also, statistical validation procedures showed that several genes put forward as being the best by the programs were in fact, regulated, making them unsuitable as reference genes. Additionally, eef1 which was found to be a suitable - though not the top ranked - reference gene for liver tissues in one year, was regulated in another.ConclusionsOur study highlights the need for external validations of reference gene selections made by computer programs. Researchers need to be vigilant in validating and reporting the rationale for the use of reference gene in published studies.


General and Comparative Endocrinology | 2012

Androgen-specific regulation of FSH signalling in the previtellogenic ovary and pituitary of the New Zealand shortfinned eel, Anguilla australis.

Alvin N. Setiawan; Yuichi Ozaki; Alireza Shoae; Yukinori Kazeto; P. Mark Lokman

The evidence for androgens having a pivotal role in the functioning of the female reproductive axis--such as initiating puberty or vitellogenesis--is mounting. However, the use of aromatizable androgens and the tissue-specific focus of most studies often make it unclear if androgenic effects throughout the axis proceed via androgen or estrogen signalling mechanisms. In this study, we assessed the effects of 11-ketotestosterone (11KT, a non-aromatizable androgen) on the pituitary and ovary of previtellogenic (PV) freshwater eels Anguilla australis, comparing them with eels naturally undergoing early vitellogenesis (EV). We found that 11KT treatment produces molecular and morpho-physiological phenotypes that were generally intermediate between PV and EV. Most notably, we demonstrated that 11KT induces effects on follicle-stimulating hormone (FSH) signalling in the pituitary and ovaries that are in opposition to each other. Thus, 11KT significantly reduced fshβ subunit expression in the pituitary. At the same time, 11KT dramatically increased mRNA levels of ovarian FSH receptor and plasma levels of estradiol-17β, very likely sensitizing the previtellogenic follicle to the FSH signal. Androgens therefore may be important in facilitating puberty in the eel.


Hormones and Behavior | 2007

Effects of artificial social stimuli on the reproductive schedule and hormone levels of yellow-eyed penguins (Megadyptes antipodes)

Alvin N. Setiawan; Lloyd S. Davis; John T. Darby; P. Mark Lokman; Graham Young; Margaret Blackberry; B.L. Cannell; Graeme Martin

The effects of social stimuli on avian reproductive behaviors such as breeding schedules and courtship behaviors are well known due to numerous field studies. However, studies that have simultaneously examined the effects of social stimuli on reproductive behavior and the mediating endocrine mechanisms have been largely restricted to captive populations, which may not be representative of free-living populations. This study, conducted over two breeding seasons, aimed to simultaneously measure the effects of experimentally increasing auditory stimuli on the breeding schedule and endocrinology (levels of total androgen, estradiol, progesterone and prolactin) on free-living yellow-eyed penguins (Megadyptes antipodes). The yellow-eyed penguin is the least colonial of all penguins, nesting far apart from each other under dense vegetation, and, therefore, is presumed to experience much lower levels of social stimuli than other penguins. Egg laying was significantly more synchronous and tended to be earlier when birds were exposed to playbacks of the calls of conspecifics in 1 year of the study. We also found that levels of total androgen and estradiol of males in 1 year, and prolactin in another year, were proportionally higher among treated birds compared control birds that received no artificial auditory stimuli. These results show that even among supposedly solitary nesters, social stimuli could still play a role in influencing reproductive behavior and physiology. For the first time in free-living seabirds, we have demonstrated that behavioral responses to increased social stimuli are associated with hormonal changes.


The Condor | 2005

MATE AND TERRITORY RETENTION IN YELLOW-EYED PENGUINS

Alvin N. Setiawan; Melanie Massaro; John T. Darby; Lloyd S. Davis

Abstract Using nest and banding data collected from 1991 to 2002, we investigated mate and territory retention rates of Yellow-eyed Penguins (Megadyptes antipodes), and the effects of reproductive success. Annual mate retention rate was 63%, and territory retention for males and females were 52% and 46% respectively. The majority of pair dissolutions were due to death of a partner, with only 6% of bonds ending in separation. Previous reproductive success was a good predictor of mate or territory retention as pairs that failed to fledge a single chick were significantly more likely to separate or move their territories than those that were successful at fledging chicks. Reproductive success of birds that changed their mates or moved territories was not higher than those that retained their mates or territories. However, birds that moved territories were less likely to have reduced fledging success relative to their previous breeding attempt. Birds that did not retain their mates, particularly males, were significantly more likely to skip breeding for at least one year. This suggests that the costs of mate or territory changes are not accrued at the end of the breeding attempt (as reflected by the number of fledged chicks), but are associated with the costs of pair formation and establishment of territories at the beginning of the breeding season. Retención de Parejas y Territorios en Pingüinos Megadyptes antipodes Resumen. Investigamos las tasas de retención de parejas y de territorios por parte de pingüinos Megadyptes antipodes y el efecto del éxito reproductivo sobre estas tasas con base en datos de nidificación y anillamiento recolectados entre 1991 y 2002. La tasa anual de retención de parejas fue del 63% y las de retención de territorios del 52% y 46% para machos y hembras, respectivamente. La mayoría de las disoluciones de parejas se debieron a la muerte de una de las aves y sólo el 6% de las parejas terminaron separándose. El éxito reproductivo previo predijo acertadamente la retención de compañeros y de territorios, ya que las parejas que no lograron emplumar ningún pichón tuvieron una probablilidad de disolverse o de cambiar de territorio significativamente mayor que las que criaron exitosamente. El éxito reproductivo de las aves que cambiaron de pareja o de territorio no fue mayor que el de aquellas que no lo hicieron. Sin embargo, los individuos que cambiaron de territorio fueron más propensos a presentar un éxito de emplumamiento reducido con respecto a su intento reproductivo previo. Las aves que no retuvieron sus parejas, particularmente los machos, presentaron una probabilidad mayor de no reproducirse durante al menos un año. Esto sugiere que los costos que implica cambiar de pareja o de territorio no se hacen evidentes al final del intento reproductivo (como lo indica el número de volantones producidos), sino que están asociados con los costos de la formación de parejas y el establecimiento de territorios al comienzo de la época reproductiva.


Zoological Science | 2012

The Effects of 11-ketotestosterone on Occupation of Downstream Location and Seawater in the New Zealand Shortfinned Eel, Anguilla australis

Alvin N. Setiawan; Matthew J. Wylie; Erin Louise Forbes; Pieter Mark Lokman

The androgen 11-ketotestosterone (11KT) is associated with the physiological and morphological changes that occur during the transformation of sedentary (‘yellow’) freshwater eels (Anguilla spp.) into their migratory form (‘silver’) prior to their spawning migration in the ocean. In this study, we investigate the possible role of 11KT in modulating behaviors consistent with downstream migration; i.e., downstream and salinity preference in the New Zealand shortfinned eel (A. australis). Unlike silvering, 11KT did not induce preference for downstream locations, scored as presence at the downstream ends of 35 m raceways. Likewise, there was no evidence for increased salinity preference in 11KT-treated yellow eels, scored as preference for sea water over fresh water in a choice experiment. However, the 11KT treatment induced higher frequency of movements between fresh water and sea water, which may indicate restlessness.


Emu | 2009

Diet composition, continuity in prey availability and marine habitat – keystones to population stability in the Snares Penguin (Eudyptes robustus)

Thomas Mattern; David M. Houston; Chris Lalas; Alvin N. Setiawan; Lloyd S. Davis

Abstract Worldwide, crested penguins (Eudyptes spp.) are in decline and it is suspected that reduced prey availability plays an important role. However, the population of Snares Penguins (E. robustus) does not follow this trend, with its population being stable if not slightly increasing. To assess whether the success of the Snares Penguins is a result of a rich and stable prey resource within the breeding range of the species, we examined the dietary composition of breeding Snares Penguins by analysis of stomach contents, and analysed ratios of carbon (δ13C) and nitrogen (δ15N) stable isotopes in feathers of living penguins and historical specimens. The food brought ashore by the Penguins was dominated by a single species of krill, Nyctiphanes australis (∼60% of wet weight of the stomach samples); fish (∼30%) and cephalopods (∼10%) seemed to form only a minor portion. However, numbers of fish otoliths and cephalopod beaks in the samples suggest that these prey classes are more important food source for adult Penguins while at sea. Stable isotope ratios of Snares Penguin feathers collected between 1880 and 2004 revealed no temporal trend in either δ13C or δ15N indicating no significant changes in marine productivity or general composition of the diet of Snares Penguins in the past 120 years. We discuss our findings in the light of declining population trends and changing stable isotope ratios recently detected in Rockhopper Penguins (E. chrysocome), and conclude that the Snares Penguins benefit from stable prey availability as a function of the oceanographic setting of their breeding habitat.


General and Comparative Endocrinology | 2007

Elevated hormonal stress response and reduced reproductive output in Yellow-eyed penguins exposed to unregulated tourism

Ursula Ellenberg; Alvin N. Setiawan; Alison Cree; David M. Houston; Philip J. Seddon


Biological Conservation | 2004

Nature-based tourism impacts on yellow-eyed penguins Megadyptes antipodes: does unregulated visitor access affect fledging weight and juvenile survival?

Maureen R. McClung; Philip J. Seddon; M. Massaro; Alvin N. Setiawan


Canadian Journal of Fisheries and Aquatic Sciences | 2005

Foraging of royal albatrosses, Diomedea epomophora, from the Otago Peninsula and its relationships to fisheries

Susan M. Waugh; Dominique P. Filippi; Akira Fukuda; Makio Suzuki; Hiroyoshi Higuchi; Alvin N. Setiawan; Lloyd S. Davis

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B.L. Cannell

University of Western Australia

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Graeme Martin

University of Western Australia

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