Ana Margarete Matias

The influence of coastal processes on inner shelf sediment distribution: The Eastern Algarve Shelf (Southern Portugal)

This study examines sediment distribution patterns in the Southeastern Algarve inner shelf (southern Portugal), an area characterized by marked variations in its coastal environment and low continental supply of sediments. The specific goals of this study were to identify the principal sediment sources and the factors influencing sediment transport paths and deposition. A total of 199 samples, collected along the shelf from the Guadiana River mouth to Olhos de Agua, were analyzed. Grain-size distribution and parameters were measured for all the samples. Terrigenous and biogenic components of sand were identified in 38 samples, and results analyzed using multivariate non-linear multidimension scaling (MDS) and cluster analysis. Patterns of sediment distribution in this area of the inner shelf vary according to water depth and exhibit significant longshore variation, related mainly to coastal processes (littoral drift and storm currents) and to a lower degree to sediment sources. Sand is dominant at all depths, reflecting the influence of littoral drift in the supply and redistribution of shelf sediments. Fine and gravelsized deposits are significant in specific areas and are usually associated with changes in sediment composition. Five sectors have been identified according to sedimentary dynamics. The results, based on geostatistical and multivariate analysis, have allowed detailed sediment distribution maps to be generated, which represent an update of the existing cartography and serve as a tool for the management of coastal and marine resources. They have been furthermore compared with inner shelf sediment dynamics in other regions worldwide, to distinguish between specific regional responses to forcing mechanisms and processes that are more generalized within this type of shelf environments. In this context, the results obtained results in the Algarve study area are of great interest for the understanding of sediment dynamics of sand dominated inner shelves with reduced continental supply.

A Microarray-Based Analysis of Gametogenesis in Two Portuguese Populations of the European Clam Ruditapes decussatus

The European clam, Ruditapes decussatus is a species with a high commercial importance in Portugal and other Southern European countries. Its production is almost exclusively based on natural recruitment, which is subject to high annual fluctuations. Increased knowledge of the natural reproductive cycle of R. decussatus and its molecular mechanisms would be particularly important in providing new highly valuable genomic information for better understanding the regulation of reproduction in this economically important aquaculture species. In this study, the transcriptomic bases of R. decussatus reproduction have been analysed using a custom oligonucleotide microarray representing 51,678 assembled contigs. Microarray analyses were performed in four gonadal maturation stages from two different Portuguese wild populations, characterized by different responses to spawning induction when used as progenitors in hatchery. A comparison between the two populations elucidated a specific pathway involved in the recognition signals and binding between the oocyte and components of the sperm plasma membrane. We suggest that this pathway can explain part of the differences in terms of spawning induction success between the two populations. In addition, sexes and reproductive stages were compared and a correlation between mRNA levels and gonadal area was investigated. The lists of differentially expressed genes revealed that sex explains most of the variance in gonadal gene expression. Additionally, genes like Foxl2, vitellogenin, condensing 2, mitotic apparatus protein p62, Cep57, sperm associated antigens 6, 16 and 17, motile sperm domain containing protein 2, sperm surface protein Sp17, sperm flagellar proteins 1 and 2 and dpy-30, were identified as being correlated with the gonad area and therefore supposedly with the number and/or the size of the gametes produced.

Reproductive effort of the European clam Ruditapes decussatus (Linnaeus, 1758): influence of different diets and temperatures

Abstract Ruditapes decussatus is a species of importance to aquaculture. For hatcheries to consistently produce spat it is essential to develop broodstock conditioning techniques. Food and temperature are the main factors that regulate the timing and rate of energy storage and reproduction in bivalves. This study was designed to evaluate the effects of different diets and temperatures on reproductive output of R. decussatus and express the evolution of the different lipid classes during sexual maturation. Broodstock clams were conditioned at 20 ± 1 °C under four nutritional regimes: unfed, two mono-specific diets, Isochrysis galbana clone T-ISO and Chaetoceros calcitrans and, a mixture of these microalgae. Another group of clams was conditioned at 22 ± 1 °C and was fed the same mixture of microalgae. Gametogenesis, energy storage and spawning success were all influenced by the nutritional value of the diet received, as evidenced by the differences in reproductive effort among the single and combined supplemental diets. Temperature must be carefully managed to improve the reproductive conditioning of bivalves: high temperature throughout gametogenesis shortens the time to full ripeness but does not produce better reproductive output. The combination diet at 20 ± 1 °C is best for R. decussatus broodstock conditioning.

Relationships between broodstock condition, oocyte quality, and 24 h D-larval survival during the spawning season of the pullet carpet shell Venerupis corrugata (Gmelin, 1791)

Abstract Venerupis corrugata is commercially exploited in Europe. Over-fishing and recruitment failure is causing the decline of its populations and stock sustainability. Knowledge of this species reproduction is paramount to establish hatchery production of juveniles for restoring natural beds. This work aimed to find a relationship between broodstock condition, oocyte quality, and viability of 24 h D-larvae. Adult specimens were induced to spawn by thermal stimulation. From each female, oocytes were taken for biochemical analyses (proteins, total lipids, and carbohydrates), and the remaining oocytes were fertilized. The 24 h D-larval yield was calculated after embryo incubation. Spawning in the hatchery with ‘wild’ broodstock was possible for a long period, however, subsequent larval viability varied according to oocyte quality. Two distinct periods of spawning were recorded: in January/March, with a higher number of oocytes released, and in June/July with a lower response to the spawning stimulation, however with greater success in 24 h D-larval survival. The condition index of broodstock and the total lipids of oocytes released can be used as benchmarks for estimating the success of D veliger larvae.

Biochemical and energy dynamics throughout the reproductive cycle of the striped venus Chamelea gallina (Mollusca, Bivalvia)

The striped venus Chamelea gallina is an important commercial bivalve species in Europe. However, large inter-annual fluctuations in stock abundance and periodic recruitment failure threaten the biological and economic sustainability of this fishery. This study aimed to improve the knowledge of the reproductive cycle and reproductive strategies of this species from the Algarve coast (southern Portugal) in order to contribute to the establishment of management measures and to assess its potential for aquaculture. The reproductive cycle of C. gallina followed a seasonal cycle, significantly influenced by sea surface temperature and food availability. Gametogenesis took place in winter, coinciding with the phytoplankton bloom. Spawning occurred during summer, followed by a short period of sexual inactivity in autumn. Condition index did not reflect the reproductive cycle of C. gallina and generally, followed the same trend of chlorophyll a. Glycogen was positively correlated with gonadal index and chlorophyll a. High total lipid values were recorded throughout gonad ripeness and spawning, but decreased at the end of the spawning and in the rest period. The extended spawning period of C. gallina will allow larvae to be obtained for much of the year by artificial spawning of wild broodstock.

Reproductive cycle of the European clam Ruditapes decussatus from Óbidos Lagoon, Leiria, Portugal

ABSTRACT In Portugal, the European clam (Ruditapes decussatus) is an important commercial resource. Óbidos Lagoon is a strong candidate as a cultivation area to increase European clam exploitation. However, the reproductive biology of this population has not been described. In this work, the reproductive cycle of R. decussatus was characterized by determining gonadal development stages, gonad index, condition index, and biochemical composition. The relationship between reproduction and environmental parameters (sea surface temperature, chlorophyll a, and particulate organic matter) was assessed. Ruditapes decussatus had an annual reproductive cycle. The gametogenic cycle started in late winter, and the ripe stage in spring was followed by spawning that began at the end of spring/early summer and extended until early autumn. The subsequent period of sexual rest occurred during the winter. Condition index showed seasonal variations related to food availability (chlorophyll a). The European clams in Óbidos Lagoon recovered rapidly after their reproductive period, most likely owing to the availability of food. This study will help to improve sustainable management of this wild stock and is important for future aquaculture development of this species.