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Dive into the research topics where Andrew Kolodziej is active.

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Featured researches published by Andrew Kolodziej.


Circulation | 2004

In Vivo Molecular Imaging of Acute and Subacute Thrombosis Using a Fibrin-Binding Magnetic Resonance Imaging Contrast Agent

René M. Botnar; Alexandra S. Perez; Sonia Witte; Andrea J. Wiethoff; James Laredo; James A. Hamilton; William C. Quist; Edward C. Parsons; Anand Vaidya; Andrew Kolodziej; John A. Barrett; Philip B. Graham; Robert M. Weisskoff; Warren J. Manning; Michael T. Johnstone

Background—Plaque rupture with subsequent thrombosis is recognized as the underlying pathophysiology of most acute coronary syndromes and stroke. Thus, direct thrombus visualization may be beneficial for both diagnosis and guidance of therapy. We sought to test the feasibility of direct imaging of acute and subacute thrombosis using MRI together with a novel fibrin-binding gadolinium-labeled peptide, EP-1873, in an experimental animal model of plaque rupture and thrombosis. Methods and Results—Fifteen male New Zealand White rabbits (weight, ≈3.5 kg) were made atherosclerotic by feeding a high-cholesterol diet after endothelial aortic injury. Plaque rupture was then induced with the use of Russell’s viper venom (RVV) and histamine. Subsequently, MRI of the subrenal aorta was performed before RVV, after RVV, and after EP-1873. Histology was performed on regions suggested by MRI to contain thrombus. Nine rabbits (60%) developed plaque rupture and thrombus, including 25 thrombi visually apparent on MRI as “hot spots” after injection of EP-1873. Histological correlation confirmed all 25 thrombi (100%), with no thrombi seen in the other regions of the aorta. In the remaining 6 rabbits (control) without plaque rupture, no thrombus was observed on the MR images or on histology. Conclusions—We demonstrate the feasibility of in vivo “molecular” MRI for the detection of acute and subacute thrombosis using a novel fibrin-binding MRI contrast agent in an animal model of atherosclerosis and acute/subacute thrombosis. Potential clinical applications include thrombus detection in acute coronary syndromes and stroke.


Journal of the American Chemical Society | 2008

EP-2104R: A Fibrin-Specific Gadolinium-Based MRI Contrast Agent for Detection of Thrombus

Kirsten Overoye-Chan; Steffi K. Koerner; Richard J. Looby; Andrew Kolodziej; Stephan G. Zech; Qing Deng; Jaclyn M. Chasse; Thomas J. McMurry; Peter Caravan

Thrombus (blood clot) is implicated in a number of life threatening diseases, e.g., heart attack, stroke, pulmonary embolism. EP-2104R is an MRI contrast agent designed to detect thrombus by binding to the protein fibrin, present in all thrombi. EP-2104R comprises an 11 amino acid peptide derivatized with 2 GdDOTA-like moieties at both the C- and N-terminus of the peptide (4 Gd in total). EP-2104R was synthesized by a mixture of solid phase and solution techniques. The La(III) analogue was characterized by and 1D and 2D NMR spectroscopy and was found to have the expected structure. EP-2104R was found to be significantly more inert to Gd(III) loss than commercial contrast agents. At the most extreme conditions tested (pH 3, 60 degrees C, 96 hrs), less than 10% of Gd was removed from EP-2104R by a challenge with a DTPA based ligand, while the commercial contrast agents equilibrated within minutes to hours. EP-2104R binds equally to two sites on human fibrin (Kd = 1.7 +/- 0.5 microM) and has a similar affinity to mouse, rat, rabbit, pig, and dog fibrin. EP-2104R has excellent specificity for fibrin over fibrinogen (over 100-fold) and for fibrin over serum albumin (over 1000-fold). The relaxivity of EP-2104R bound to fibrin at 37 degrees C and 1.4 T was 71.4 mM(-1) s(-1) per molecule of EP-2104R (17.4 per Gd), about 25 times higher than that of GdDOTA measured under the same conditions. Strong fibrin binding, fibrin selectivity, and high molecular relaxivity enable EP-2104R to detect blood clots in vivo.


Bioconjugate Chemistry | 2012

Fibrin Specific Peptides Derived by Phage Display: Characterization of Peptides and Conjugates for Imaging

Andrew Kolodziej; Shrikumar A. Nair; Philip B. Graham; Thomas J. McMurry; Robert Charles Ladner; Charles R. Wescott; Daniel J. Sexton; Peter Caravan

Peptides that bind to fibrin but not to fibrinogen or serum albumin were selected from phage display libraries as targeting moieties for thrombus molecular imaging probes. Three classes of cyclic peptides (cyclized via disulfide bond between two Cys) were identified with consensus sequences XArXCPY(G/D)LCArIX (Ar = aromatic, Tn6), X(2)CXYYGTCLX (Tn7), and NHGCYNSYGVPYCDYS (Tn10). These peptides bound to fibrin at ∼2 sites with K(d) = 4.1 μM, 4.0 μM, and 8.7 μM, respectively, whereas binding to fibrinogen was at least 100-fold weaker. The peptides also bind to the fibrin degradation product DD(E) with similar affinity to that measured for fibrin. The Tn7 and Tn10 peptides bind to the same site on fibrin, while the Tn6 peptides bind to a unique site. Alanine scanning identified the N- and C-terminal ends of the Tn6 and Tn7 peptides as most tolerant to modification. Peptide conjugates with either fluorescein or diethylenetriaminepentaaceto gadolinium(III) (GdDTPA) at the N-terminus were prepared for potential imaging applications, and these retained fibrin binding affinity and specificity in plasma. Relaxivity and binding studies on the GdDTPA derivatives revealed that an N-terminal glycyl linker had a modest effect on fibrin affinity but resulted in lower fibrin-bound relaxivity.


Angewandte Chemie | 2011

Heteroditopic Binding of Magnetic Resonance Contrast Agents for Increased Relaxivity

Zhaoda Zhang; Andrew Kolodziej; Matthew T. Greenfield; Peter Caravan

Contrast agents for Magnetic Resonance Imaging (MRI) provide anatomical and functional detail and increasingly can convey information at the molecular level.[1] The field of molecular MRI has advanced to the point that clinical studies with molecularly targeted agents are now appearing.[2] Despite the tremendous strengths of molecular MRI (molecular specificity superimposed on a high spatial resolution anatomical image, deep tissue penetration, three dimensional imaging, and lack of ionizing radiation), the field remains limited by the relatively low sensitivity for contrast agent detection.[1b, 3] Sensitivity of contrast agents is typically described by the extent to which they can induce relaxation of tissue water, and this is termed relaxivity (r1). Molecular relaxivity can be increased either by increasing the number of paramagnetic ions in the molecule, or optimizing the molecular factors that influence relaxation, or some combination of both.


Methods of Molecular Biology | 2014

Peptide Optimization and Conjugation Strategies in the Development of Molecularly Targeted Magnetic Resonance Imaging Contrast Agents

Andrew Kolodziej; Zhaoda Zhang; Kirsten Overoye-Chan; Vincent Jacques; Peter Caravan

Peptides are highly selective, high-affinity ligands for a diverse array of disease targets, but suitably derivatizing them for application as diagnostic or therapeutic agents often presents a significant challenge. Covalent modification with metal chelates frequently results in decreased binding affinity, so a variety of strategies must be explored to find suitable locations for modification and facile peptide conjugation chemistries that maintain or enhance binding affinity. In this chapter, we present a paradigm for systematically optimizing peptide binding and determining the favorable sites and methods for peptide conjugation. This strategy is illustrated by two case studies of peptide-based targeted gadolinium contrast agents: EP-2104R for diagnosis of thrombosis and EP-3533 for diagnosis of cardiac perfusion and fibrosis. Two different architectures for the peptide-metal complex conjugation were designed: EP-2104R contains a total of four gadolinium (Gd) chelates linked at the N- and C-termini, whereas EP-3533 is derivatized with three Gd chelates, two on the N-terminus and one on a lysine side chain. Detailed protocols are provided for two Gd chelate conjugation methods.


Angewandte Chemie | 2007

Collagen-targeted MRI contrast agent for molecular imaging of fibrosis.

Peter Caravan; Biplab Kumar Das; Stephane Dumas; Frederick H. Epstein; Patrick A. Helm; Vincent Jacques; Steffi K. Koerner; Andrew Kolodziej; Luhua Shen; Wei-Chuan Sun; Zhaoda Zhang


Angewandte Chemie | 2001

Enzyme-Activated Gd(3+) Magnetic Resonance Imaging Contrast Agents with a Prominent Receptor-Induced Magnetization Enhancement We thank Dr. Shrikumar Nair for helpful discussions.

Alexander L. Nivorozhkin; Andrew Kolodziej; Peter Caravan; Matthew T. Greenfield; Randall B. Lauffer; Thomas J. McMurry


Angewandte Chemie | 2001

Enzyme‐Activated Gd3+ Magnetic Resonance Imaging Contrast Agents with a Prominent Receptor‐Induced Magnetization Enhancement

Alexander L. Nivorozhkin; Andrew Kolodziej; Peter Caravan; Matthew T. Greenfield; Randall B. Lauffer; Thomas J. McMurry


Archive | 2000

Targeting multimeric imaging agents through multilocus binding

Randall B. Lauffer; Thomas J. McMurry; Stephane Dumas; Andrew Kolodziej; John C. Amedio; Peter D. Caravan; Zhaoda Zhang


Archive | 2002

Polypeptide conjugates with extended circulating half-lives

Theodore R. West; Thomas J. McMurry; Stephane Dumas; Andrew Kolodziej

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