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Dive into the research topics where Andrew Riches is active.

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Featured researches published by Andrew Riches.


Optics Express | 2006

Femtosecond optical transfection of cells:viability and efficiency

David Stevenson; B. Agate; Xanthi Tsampoula; P. Fischer; C.T.A. Brown; W. Sibbett; Andrew Riches; Frank Gunn-Moore; Kishan Dholakia

Photoporation is a rapidly expanding technique for the introduction of macromolecules into single cells. However, there remains no study into the true efficiency of this procedure. Here, we present a detailed analysis of transfection efficiency and cell viability for femtosecond optical transfection using a titanium sapphire laser at 800 nm. Photoporation of 4000 Chinese Hamster ovary cells was performed, representing the largest optical transfection study reported to date. We have investigated a range of laser fluences at the cell membrane and, at 1.2 microJ/cm(2), have found an average transfection efficiency of 50 +/- 10%. Contrary to recent literature, in which 100% efficiency is claimed, our measure of efficiency accounts for all irradiated cells, including those lost as a result of laser treatment, thereby providing a true biological measure of the technique.


International Journal of Cancer | 2007

Early detection of cervical neoplasia by Raman spectroscopy

Philip R.T. Jess; Daniel Smith; Michael Mazilu; Kishan Dholakia; Andrew Riches; C. Simon Herrington

Early detection of malignant tumours, or their precursor lesions, improves patient outcome. High risk human papillomavirus (HPV), particularly HPV16, infection can lead to the development of uterine cervical neoplasia, and therefore, the identification in clinical samples of the effects of HPV infection may have clinical value. In this report, we apply Raman microspectroscopy to live and fixed cultured cells to discriminate between defined cell types. Raman spectra were acquired from primary human keratinocytes (PHK), PHK expressing the E7 gene of HPV 16 (PHK E7) and CaSki cells, an HPV16‐containing cervical carcinoma‐derived cell line. Averaged Raman spectra showed variations, mostly in peaks originating from DNA and proteins, consistent with HPV gene expression and cellular changes associated with neoplasia, in both live and fixed cells. Principal component analysis produced good discrimination between the cell types, with sensitivities of up to 100% for the comparison of fixed PHK and CaSki. These results demonstrate the ability of Raman spectroscopy to discriminate between cell types representing different stages of cervical neoplasia. More specifically, this technique was able to identify cells expressing the HPV 16 E7 gene accurately and objectively, suggesting that this approach may be of value in diagnosis. Moreover, the ability to detect the effects of the virus in fixed samples also demonstrates the compatibility of Raman spectroscopy with current cervical screening methods.


The Journal of Physiology | 1973

Blood volume determination in the mouse.

Andrew Riches; J. G. Sharp; D. Brynmor Thomas; S. Vaughan Smith

1. The blood volume of the mouse has been measured using 59Fe‐labelled red cells to determine the red cell volume and 131I‐labelled human serum albumin to determine the plasma volume.


Immunology | 2012

Nanoparticle tracking analysis monitors microvesicle and exosome secretion from immune cells

Chin Y. Soo; Yaqiong Song; Ying Zheng; Elaine C. Campbell; Andrew Riches; Frank Gunn-Moore; Simon J. Powis

Nanoparticle tracking analysis permits the determination of both the size distribution and relative concentration of microvesicles, including exosomes, in the supernatants of cultured cells and biological fluids. We have studied the release of microvesicles from the human lymphoblastoid T‐cell lines Jurkat and CEM. Unstimulated, both cell lines release microvesicles in the size range 70–90 nm, which can be depleted from the supernatant by ultracentrifugation at 100 000 g, and by anti‐CD45 magnetic beads, and which by immunoblotting also contain the exosome‐associated proteins Alix and Tsg101. Incubation with known potentiators of exosome release, the ionophores monensin and A23187, resulted in a significant increase in microvesicle release that was both time and concentration dependent. Mass spectrometric analysis of proteins isolated from ultracentrifuged supernatants of A23187‐treated cells revealed the presence of exosome‐associated proteins including heat‐shock protein 90, tubulin, elongation factor α1, actin and glyceraldehyde 3‐phosphate dehydrogenase. Additionally, treatment of peripheral blood monocyte‐derived dendritic cells with bacterial lipopolysaccharide displayed an increase in secreted microvesicles. Consequently, nanoparticle tracking analysis can be effectively applied to monitor microvesicle release from cells of the immune system.


Applied Physics Letters | 2005

Light-induced cell separation in a tailored optical landscape

Lynn Paterson; Eirini Papagiakoumou; Graham Milne; V. Garcés-Chávez; Svetlana A. Tatarkova; W. Sibbett; Frank Gunn-Moore; Peter E. Bryant; Andrew Riches; Kishan Dholakia

We demonstrate passive optical sorting of cell populations in the absence of any externally driven fluid flow. Specifically, we report the movement of erythrocytes and lymphocytes in an optical landscape, consisting of a circularly symmetric light pattern created by a Bessel light beam. These distinct cell populations move, spontaneously and differentially, across the underlying periodic optical landscape. Thus, we were able to separate lymphocytes from a mixed population of cells containing erythrocytes and then collect the lymphocytes in a microcapillary reservoir. We also demonstrate an enhanced form of this separation that exploits the polarizability of silica microspheres by attaching spheres coated with antibodies to cell surface markers to a subpopulation of lymphocytes. These techniques may be applied using standard laboratory apparatus.


Optics Express | 2005

Photoporation and cell transfection using a violet diode laser

Lynn Paterson; B. Agate; Muriel Comrie; R. Ferguson; Tanya K. Lake; J. E. Morris; Antonia E. Carruthers; Christian T. A. Brown; W. Sibbett; Peter E. Bryant; Frank Gunn-Moore; Andrew Riches; Kishan Dholakia

The introduction and subsequent expression of foreign DNA inside living mammalian cells (transfection) is achieved by photoporation with a violet diode laser. We direct a compact 405 nm laser diode source into an inverted optical microscope configuration and expose cells to 0.3 mW for 40 ms. The localized optical power density of ~1200 MW/m2 is six orders of magnitude lower than that used in femtosecond photoporation (~104 TW/m2). The beam perforates the cell plasma membrane to allow uptake of plasmid DNA containing an antibiotic resistant gene as well as the green fluorescent protein (GFP) gene. Successfully transfected cells then expand into clonal groups which are used to create stable cell lines. The use of the violet diode laser offers a new and simple poration technique compatible with standard microscopes and is the simplest method of laser-assisted cell poration reported to date.


Oncogene | 2005

Mutations of the PU.1 Ets domain are specifically associated with murine radiation-induced, but not human therapy-related, acute myeloid leukaemia

Nirosha Suraweera; Emmy Meijne; John Moody; Luis Carvajal-Carmona; Kazuko Yoshida; Patrick J. Pollard; Jude Fitzgibbon; Andrew Riches; Theo van Laar; René Huiskamp; Andrew Rowan; Ian Tomlinson; Andrew Silver

Murine radiation-induced acute myeloid leukaemia (AML) is characterized by loss of one copy of chromosome 2. Previously, we positioned the critical haematopoietic-specific transcription factor PU.1 within a minimally deleted region. We now report a high frequency (>65%) of missense mutation at codon 235 in the DNA-binding Ets domain of PU.1 in murine AML. Earlier studies, outside the context of malignancy, determined that conversion of arginine 235 (R235) to any other amino-acid residue leads to ablation of DNA-binding function and loss of expression of downstream targets. We show that mutation of R235 does not lead to protein loss, and occurs specifically in those AMLs showing loss of one copy of PU.1 (P=0.001, Fishers exact test). PU.1 mutations were not found in the coding region, UTRs or promoter of human therapy-related AMLs. Potentially regulatory elements upstream of PU.1 were located but no mutations found. In conclusion, we have identified the cause of murine radiation-induced AML and have shown that loss of one copy of PU.1, as a consequence of flanking radiation-sensitive fragile domains on chromosome 2, and subsequent R235 conversion are highly specific to this mouse model. Such a mechanism does not operate, or is extremely rare, in human AML.


British Journal of Nutrition | 2006

A newly constructed and validated isoflavone database for the assessment of total genistein and daidzein intake

Margaret R. Ritchie; John H. Cummings; Michael S. Morton; C. Michael Steel; Caroline Bolton-Smith; Andrew Riches

The principal phyto-oestrogens (PO) in food are isoflavones, lignans, coumestans and prenylated flavonoids, with isoflavones and lignans being the most commonly found in UK diets. Until recently obtaining accurate data on the PO content of foods was hampered by lack of suitable analytical methods and validation techniques. Furthermore, although PO data exist for some foods, these foods may not be available in the UK. The aim of the present study was to construct a new, comprehensive isoflavone (total genistein + daidzein) database. Using data, mainly from recent GC-MS analysis, for approximately 300 foods available in the UK, and extensive recipe calculations, a new database was constructed containing approximately 6000 foods allocated an isoflavone value. By analysing 7 d weighed food diaries, the database was subsequently used to estimate isoflavone intake in two groups of healthy volunteers, omnivores (n 9) and vegetarians (n 10). Mean isoflavone intake in the vegetarian and omnivorous group was 7.4 (sem 3.05) and 1.2 (sem 0.43) mg/d, respectively. Mean intake for the total group was 4.5 (sem 1.89) mg/d. Main food sources of isoflavones for the vegetarian group were soya milk (plain), meat-substitute foods containing textured vegetable protein and soya protein isolate, soya mince, wholemeal bread and rolls, white bread and rolls, croissants and pitta breads, beans, raisins and soya sauce. Main food sources of isoflavones for the omnivorous group were soya yogurts, wholemeal bread and rolls, white bread and rolls, garlic bread, nan bread and brown bread, sultanas and scones.


Cell Proliferation | 1992

The mechanism of action of the tetrapeptide acetyl-N-Ser-Asp-Lys-Pro (AcSDKP) in the control of haematopoietic stem cell proliferation.

Simon Robinson; Maryse Lenfant; Joanna Wdzieczak-Bakala; J. Melville; Andrew Riches

Abstract. The mechanism of action of the haemoregulatory tetrapeptide Acetyl‐N‐Ser‐Asp‐Lys‐Pro (AcSDKP, Mr = 487 amu), was investigated using an in vitro assay of a murine high proliferative potential colony‐forming cell (HPP‐CFC) which responds to proliferation regulators of the haematopoietic stem cell population. AcSDKP had no direct inhibitory effect on the number, or the proportion in S phase, of the committed granulocyte‐macrophage progenitor (GM‐CFC), or cycling HPP‐CFC populations. However, AcSDKP blocked the action of a stimulator of haematopoietic stem cell proliferation, preventing the switching of quiescent HPP‐CFC into cell cycle. It would appear that AcSDKP exerts its inhibitory haemoregulatory role indirectly, by preventing stimulator action on haematopoietic stem cells.


Biomedical Optics Express | 2013

Multi-modal approach using Raman spectroscopy and optical coherence tomography for the discrimination of colonic adenocarcinoma from normal colon

Praveen C. Ashok; Bavishna B. Praveen; Nicola Bellini; Andrew Riches; Kishan Dholakia; C. Simon Herrington

We report a multimodal optical approach using both Raman spectroscopy and optical coherence tomography (OCT) in tandem to discriminate between colonic adenocarcinoma and normal colon. Although both of these non-invasive techniques are capable of discriminating between normal and tumour tissues, they are unable individually to provide both the high specificity and high sensitivity required for disease diagnosis. We combine the chemical information derived from Raman spectroscopy with the texture parameters extracted from OCT images. The sensitivity obtained using Raman spectroscopy and OCT individually was 89% and 78% respectively and the specificity was 77% and 74% respectively. Combining the information derived using the two techniques increased both sensitivity and specificity to 94% demonstrating that combining complementary optical information enhances diagnostic accuracy. These data demonstrate that multimodal optical analysis has the potential to achieve accurate non-invasive cancer diagnosis.

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Michael Mazilu

University of St Andrews

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B. Agate

University of St Andrews

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Muriel Comrie

University of St Andrews

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Tanya K. Lake

University of St Andrews

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W. Sibbett

University of St Andrews

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