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Dive into the research topics where Andy Y. Shih is active.

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Featured researches published by Andy Y. Shih.


Neurophotonics | 2015

Pericyte structure and distribution in the cerebral cortex revealed by high-resolution imaging of transgenic mice

David A. Hartmann; Robert G. Underly; Roger I. Grant; Ashley N. Watson; Volkhard Lindner; Andy Y. Shih

Abstract. Pericytes are essential for normal brain function, but many aspects of their physiology remain enigmatic due to a lack of tools to genetically target this cell population. Here, we characterize brain pericytes using two existing Cre-recombinase driver mouse lines that can serve distinct purposes in cerebrovascular research. One line expresses an inducible version of Cre under the NG2 proteoglycan promoter, which provides the sparse labeling necessary to define the morphology of single cells. These mice reveal structural differences between pericytes adjacent to arterioles versus those broadly distributed in the capillary bed that may underlie differential roles in control of vessel caliber. A second line expresses Cre constitutively under the platelet-derived growth factor receptor β promoter and provides continuous, highly specific and near-complete labeling of pericytes and myocytes along the entire cerebrovasculature. This line provides a three-dimensional view of pericyte distribution along the cortical angioarchitecture following optical clearing of brain tissue. In combination with recent reporter lines for expression of optogenetic actuators and activity-sensitive probes, these mice may be key tools for studying pericyte biology in the intact brain.


Microcirculation | 2015

Robust and fragile aspects of cortical blood flow in relation to the underlying angioarchitecture.

Andy Y. Shih; Charlotta Rühlmann; Pablo Blinder; Anna Devor; Patrick J. Drew; Beth Friedman; Per Magne Knutsen; Patrick D. Lyden; Celine Mateo; Lisa Mellander; Nozomi Nishimura; Chris B. Schaffer; Philbert S. Tsai; David Kleinfeld

We review the organizational principles of the cortical vasculature and the underlying patterns of blood flow under normal conditions and in response to occlusion of single vessels. The cortex is sourced by a two‐dimensional network of pial arterioles that feeds a three‐dimensional network of subsurface microvessels in close proximity to neurons and glia. Blood flow within the surface and subsurface networks is largely insensitive to occlusion of a single vessel within either network. However, the penetrating arterioles that connect the pial network to the subsurface network are bottlenecks to flow; occlusion of even a single penetrating arteriole results in the death of a 500 μm diameter cylinder of cortical tissue despite the potential for collateral flow through microvessels. This pattern of flow is consistent with that calculated from a full reconstruction of the angioarchitecture. Conceptually, collateral flow is insufficient to compensate for the occlusion of a penetrating arteriole because penetrating venules act as shunts of blood that flows through collaterals. Future directions that stem from the analysis of the angioarchitecture concern cellular‐level issues, in particular the regulation of blood flow within the subsurface microvascular network, and system‐level issues, in particular the role of penetrating arteriole occlusions in human cognitive impairment.


Lancet Neurology | 2017

Detection, risk factors, and functional consequences of cerebral microinfarcts

Susanne J. van Veluw; Andy Y. Shih; Eric E. Smith; Christopher Chen; Julie A. Schneider; Joanna M. Wardlaw; Steven M. Greenberg; Geert Jan Biessels

Cerebral microinfarcts are small lesions that are presumed to be ischaemic. Despite the small size of these lesions, affected individuals can have hundreds to thousands of cerebral microinfarcts, which cause measurable disruption to structural brain connections, and are associated with dementia that is independent of Alzheimers disease pathology or larger infarcts (ie, lacunar infarcts, and large cortical and non-lacunar subcortical infarcts). Substantial progress has been made with regard to understanding risk factors and functional consequences of cerebral microinfarcts, partly driven by new in-vivo detection methods and the development of animal models that closely mimic multiple aspects of cerebral microinfarcts in human beings. Evidence from these advances suggests that cerebral microinfarcts can be manifestations of both small vessel and large vessel disease, that cerebral microinfarcts are independently associated with cognitive impairment, and that these lesions are likely to cause damage to brain structure and function that extends beyond their actual lesion boundaries. Criteria for the identification of cerebral microinfarcts with in-vivo MRI are provided to support further studies of the association between these lesions and cerebrovascular disease and dementia.


Neuron | 2017

Entrainment of Arteriole Vasomotor Fluctuations by Neural Activity Is a Basis of Blood-Oxygenation-Level-Dependent “Resting-State” Connectivity

Celine Mateo; Per Magne Knutsen; Philbert S. Tsai; Andy Y. Shih; David Kleinfeld

Resting-state signals in blood-oxygenation-level-dependent (BOLD) imaging are used to parcellate brain regions and define functional connections between regions. Yet a physiological link between fluctuations in blood oxygenation with those in neuronal signaling pathways is missing. We present evidence from studies on mouse cortex that modulation of vasomotion, i.e., intrinsic ultra-slow (0.1xa0Hz) fluctuations in arteriole diameter, provides this link. First, ultra-slow fluctuations in neuronal signaling, which occur as an envelope over γ-band activity, entrains vasomotion. Second, optogenetic manipulations confirm that entrainment is unidirectional. Third, co-fluctuations in the diameter of pairs of arterioles within the same hemisphere diminish to chance for separations >1.4xa0mm. Yet the diameters of arterioles in distant (>5xa0mm), mirrored transhemispheric sites strongly co-fluctuate; these correlations are diminished in acallosal mice. Fourth, fluctuations in arteriole diameter coherently drive fluctuations in blood oxygenation. Thus, entrainment of vasomotion links neuronal pathways to functional connections.


Journal of Cerebral Blood Flow and Metabolism | 2016

Microvascular basis for growth of small infarcts following occlusion of single penetrating arterioles in mouse cortex

Zachary J. Taylor; Edward S. Hui; Ashley N. Watson; Xingju Nie; Rachael L. Deardorff; Jens H. Jensen; Joseph A. Helpern; Andy Y. Shih

Small cerebral infarcts, i.e. microinfarcts, are common in the aging brain and linked to vascular cognitive impairment. However, little is known about the acute growth of these minute lesions and their effect on blood flow in surrounding tissues. We modeled microinfarcts in the mouse cortex by inducing photothrombotic clots in single penetrating arterioles. The resultant hemodynamic changes in tissues surrounding the occluded vessel were then studied using in vivo two-photon microscopy. We were able to generate a spectrum of infarct volumes by occluding arterioles that carried a range of blood fluxes. Those resulting from occlusion of high-flux penetrating arterioles (flux of 2 nL/s or higher) exhibited a radial outgrowth that encompassed unusually large tissue volumes. The gradual expansion of these infarcts was propagated by an evolving insufficiency in capillary flow that encroached on territories of neighboring penetrating arterioles, leading to the stagnation and recruitment of their perfusion domains into the final infarct volume. Our results suggest that local collapse of microvascular function contributes to tissue damage incurred by single penetrating arteriole occlusions in mice, and that a similar mechanism may add to pathophysiology induced by microinfarcts of the human brain.


Archive | 2009

Targeted Occlusion to Surface and Deep Vessels in Neocortex via Linear and Nonlinear Optical Absorption

David Kleinfeld; Beth Friedman; Patrick D. Lyden; Andy Y. Shih

We discuss two complementary methods for the study of cerebral blood flow and brain function in response to the occlusion of individual, targeted blood vessels. These bear on the study of microstroke and vascular dysfunction in cortex. One method makes use of linear optical absorption by a photosensitizer, transiently circulated in the blood stream, to induce an occlusion in a surface or near-surface vessel. The second method makes use of nonlinear optical interactions, without the need to introduce an exogenous absorber, to induce an occlusion in a subsurface microvessel. A feature of both methods is that the dynamics of blood flow and functional aspects of the vasculature and underlying neurons in the neighborhood of the occluded vessel may be monitored before, during, and after the occlusion. We present details of both methods and associated surgical procedures, along with example data from published studies.


Journal of Cerebral Blood Flow and Metabolism | 2017

Organizational hierarchy and structural diversity of microvascular pericytes in adult mouse cortex

Roger I. Grant; David A. Hartmann; Robert G. Underly; Andrée-Anne Berthiaume; Narayan R. Bhat; Andy Y. Shih

Smooth muscle cells and pericytes, together called mural cells, coordinate many distinct vascular functions. Canonically, smooth muscle cells are ring-shaped and cover arterioles with circumferential processes, whereas pericytes extend thin processes that run longitudinally along capillaries. In between these canonical mural cell types are cells with features of both smooth muscle cells and pericytes. Recent studies suggest that these transitional cells are critical for controlling blood flow to the capillary bed during health and disease, but there remains confusion on how to identify them and where they are located in the brain microvasculature. To address this issue, we measured the morphology, vascular territory, and α-smooth muscle actin content of structurally diverse mural cells in adult mouse cortex. We first imaged intact 3D vascular networks to establish the locations of major gradations in mural cell appearance as arterioles branched into capillaries. We then imaged individual mural cells occupying the regions within these gradations. This revealed two transitional cells that were often similar in appearance, but with sharply contrasting levels of α-smooth muscle actin. Our findings highlight the diversity of mural cell morphologies in brain microvasculature, and provide guidance for identification and categorization of mural cell types.


Microcirculation | 2015

A murine toolbox for imaging the neurovascular unit.

David A. Hartmann; Robert G. Underly; Ashley N. Watson; Andy Y. Shih

The neurovascular unit (NVU) coordinates many essential functions in the brain including blood flow control, nutrient delivery, and maintenance of BBB integrity. These functions are the result of a cellular and molecular interplay that we are just beginning to understand. Cells of the NVU can now be investigated in the intact brain through the combined use of high‐resolution in vivo imaging and non‐invasive molecular tools to observe and manipulate cell function. Mouse lines that target transgene expression to cells of the NVU will be of great value in future work. However, a detailed evaluation of target cell specificity and expression pattern within the brain is required for many existing lines. The purpose of this review was to catalog mouse lines available to cerebrovascular biologists and to discuss their utility and limitations in future imaging studies.


Cell Reports | 2018

Dynamic Remodeling of Pericytes In Vivo Maintains Capillary Coverage in the Adult Mouse Brain

Andrée-Anne Berthiaume; Roger I. Grant; Konnor P. McDowell; Robert G. Underly; David A. Hartmann; Manuel Levy; Narayan R. Bhat; Andy Y. Shih

Direct contact and communication between pericytes and endothelial cells is critical for maintenance of cerebrovascular stability and blood-brain barrier function. Capillary pericytes have thin processes that reach hundreds of micrometers along the capillary bed. The processes of adjacent pericytes come in close proximity but do not overlap, yielding a cellular chain with discrete territories occupied by individual pericytes. Little is known about whether this pericyte chain is structurally dynamic in the adult brain. Using inxa0vivo two-photon imaging in adult mouse cortex, we show that while pericyte somata were immobile, the tips of their processes underwent extensions and/or retractions over days. The selective ablation of single pericytes provoked exuberant extension of processes from neighboring pericytes to contact uncovered regions of the endothelium. Uncovered capillary regions had normal barrier function but were dilated until pericyte contact was regained. Pericyte structural plasticity may be critical for cerebrovascular health and warrants detailed investigation.


Annals of Neurology | 2017

Structural plasticity of the ventral stream and aphasia recovery

Emilie T. McKinnon; Julius Fridriksson; G. Russell Glenn; Jens H. Jensen; Joseph A. Helpern; Alexandra Basilakos; Chris Rorden; Andy Y. Shih; M. Vittoria Spampinato; Leonardo Bonilha

Restrengthening of the residual language network is likely to be crucial for speech recovery in poststroke aphasia. Eight participants with chronic aphasia received intensive speech therapy for 3 weeks, with standardized naming tests and brain magnetic resonance imaging before and after therapy. Kurtosis‐based diffusion tensor tractography was used to measure mean kurtosis (MK) along a segment of the inferior longitudinal fasciculus (ILF). Therapy‐related reduction in the number of semantic but not phonemic errors was associated with strengthening (renormalization) of ILF MK (ru2009=u2009−0.90, pu2009<u20090.05 corrected), suggesting that speech recovery is related to structural plasticity of language‐specific components of the residual language network. Ann Neurol 2017;82:147–151

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David A. Hartmann

Medical University of South Carolina

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Robert G. Underly

Medical University of South Carolina

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Roger I. Grant

Medical University of South Carolina

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Ashley N. Watson

Medical University of South Carolina

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Andrée-Anne Berthiaume

Medical University of South Carolina

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Narayan R. Bhat

Medical University of South Carolina

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Zachary J. Taylor

Medical University of South Carolina

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Beth Friedman

University of California

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Celine Mateo

University of California

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