Angela Bihlmeier

C58 on HOPG: Soft-landing adsorption and thermal desorption

Electron-impact induced dissociation/ionization of C60 molecules was used to produce an intense beam of C58+ ions. This was directed towards a HOPG (highly oriented pyrolytic graphite) substrate under nominally perpendicular impact conditions in order to generate deposits by soft-landing (kinetic energy < 0.1 eV atom−1). Deposited C58 molecules could subsequently be thermally desorbed intactly. Thermal desorption mass spectra of the deposits exhibit only C58. Surface deposited C58 can react with background gases to generate hydride derivatives C58Hn which are also desorbable. The apparent desorption energy of C58 and C58Hn molecules from the HOPG surface varies with increasing adsorbate coverage from 2 ± 0.1 to 2.2 ± 0.1 eV as determined by a Redhead analysis. These values are 0.7 ± 0.1 eV larger than found for C60 desorbed from the same substrate.

Oriented Circular Dichroism Analysis of Chiral Surface‐Anchored Metal–Organic Frameworks Grown by Liquid‐Phase Epitaxy and upon Loading with Chiral Guest Compounds

Oriented circular dichroism (OCD) is explored and successfully applied to investigate chiral surface-anchored metal-organic frameworks (SURMOFs) based on camphoric acid (D- and Lcam) with the composition [Cu2(Dcam)(2x)(Lcam)(2-2x)(dabco)]n (dabco = 1,4-diazabicyclo-[2.2.2]-octane). The three-dimensional chiral SURMOFs with high-quality orientation were grown on quartz glass plates by using a layer-by-layer liquid-phase epitaxy method. The growth orientation, as determined by X-ray diffraction (XRD), could be switched between the [001] and [110] direction by using either OH- or COOH-terminated substrates. These SURMOFs were characterized by using OCD, which confirmed the ratio as well as the orientation of the enantiomeric linker molecules. Theoretical computations demonstrate that the OCD band intensities of the enantiopure [Cu2(Dcam)2(dabco)]n grown in different orientations are a direct result of the anisotropic nature of the chiral SURMOFs. Finally, the enantiopure [Cu2(Dcam)2(dabco)]n and [Cu2(Lcam)2(dabco)]n SURMOFs were loaded with the two chiral forms of ethyl lactate [(+)-ethyl-D-lactate and (-)-ethyl-L-lactate)]. An enantioselective enrichment of >60 % was observed by OCD when the chiral host scaffold was loaded from the racemic mixture.

Nucleophilic Additions to Alkylidene Bis(sulfoxides)—Stereoelectronic Effects in Vinyl Sulfoxides

Conjugate additions of nucleophiles (e.g. enolates, amines and malonate anions) to bis(p-tolylsulfinyl)alkenes, alkylidene-1,3-dithiane-1,3-dioxides and alkylidene-1,3-dithiolane-1,3-dioxides have recently been published. Reasons for different selectivities and reaction rates will be discussed by consideration of steric and electronic effects. The preferred mode of attack can be explained by stereoelectronic effects (hyperconjugation) in the primarily carbanion, which is stabilized by n-->S-O-sigma* interaction with an antiperiplanar S=O group. Calculation of the transition states [BP86/aug-TZVP] for the addition of acetone enolate to the dithiane-derived alkylidene bis(sulfoxide) revealed that 6.6-7.3 kJ mol(-1) more energy is needed for an attack leading to a less-stabilized carbanion. Two axial S=O groups in dithiolane-derived alkylidene bis(sulfoxides) lead to a higher reactivity towards nucleophiles.

Solid C58 films

A new solid material has been created in ultra high vacuum by utilizing the aggregation process of C58 molecules deposited onto highly oriented pyrolytic graphite from a mass selected low-energy ion beam comprising C58+. Cluster fluxes of up to 3x10(11) ions s-1 cm-2 with impinging kinetic energies of 6+/-0.5 eV were typically applied. Growth of the solid C58 phase proceeds according to the cluster-aggregation-based Volmer-Weber scenario where initially ramified 2D islands transform into 3D pyramid-like structures at higher coverages. The C58 films created exhibit much higher thermal stability than the C60 solid phase. Sublimation of C58 sets in at a temperature of 700 K. Ultraviolet photoionization spectra (He I, 21.2 eV) yield a molecular ionization potential in the range between 6.6 and 7 eV. Density functional and Hartree-Fock theories suggest that the formation of C58 dimers and higher multimers upon deposition/aggregation gives rise to the high thermal stability and unique electronic properties of this material.

Non-IPR C60 solids.

Films comprising predominantly novel isomers of C(60) [=C(60)(nIPR)] have been generated by low energy ion beam deposition of vibronically excited C(60)(+) onto graphite followed by selective sublimation of C(60)(I(h)) from the deposited isomer mixture. The incident ions were generated by electron impact ionization/fragmentation of sublimed C(70). Images of the C(60)(nIPR) films obtained by applying atomic force microscopy show aggregates, which we attribute to covalently interlinked C(60)(nIPR) units. The covalent bonds are inferred from the significantly higher thermal stability of the C(60)(nIPR) films compared to the C(60)(I(h)) van der Waals solid-as measured by thermal desorption with mass spectrometric detection of the C(60) mass channel (the only desorbable species). In contrast to the characteristic doublet structure of the occupied valence band in the ultraviolet photoelectron spectrum of pure C(60)(I(h)), the valence band of C(60)(nIPR) films exhibits a triplet feature with the additional peak occurring at a binding energy of approximately 2.6 eV. This is an indicator of the electronic modifications induced by intermolecular bonding. C(60)(nIPR) films exhibit a narrower band gap than found for C(60)(I(h)). They also have significantly different chemical reactivity toward incorporation of thermal energy deuterium atoms. In order to model the experimental photoelectron spectra, various covalently linked oligomers of (#1809)C(60)(C(2v)), the second most stable conventional 60-atom fullerene cage, were calculated by means of the density functional theory. These spectral predictions together with analogous previous observations on related fullerene solids such as C(58) lead us to infer that C(60)(nIPR) films consist of fullerene cage isomers containing one or more adjacent pentagon pairs, which mediate covalent cage-cage interconnection.

Low energy hydrogenation products of extended π systems CnH2x: A density functional theory search strategy, benchmarked against CCSD(T), and applied to C60

An approach for the systematic determination of particularly stable hydride compositions C(n)H(2x) of a fullerene C(n) is presented. The study is divided into three parts. First, a CCSD(T) benchmark study on benzene and naphthalene hydrogenation is carried out. We show that the TPSS and BP86 functionals give more reliable relative isomer energies and reaction energies than B3LYP, when compared to CCSD(T) calculations. We therefore recommend BP86 for use on fullerenes. In the second part, a scheme for reduction in the immense number of possible fullerene hydride isomers is proposed. The scheme is based on thermodynamic sampling and involves density functional based tight binding as fast preselection method. The testing of the approach for C(60) constitutes the last part of the study. A low energy pathway for C(60)H(36) production is determined. Particularly stable structures are identified through analysis of the reaction energies along this pathway. These are C(60)H(2x) with 2x=18, 30, and 36. The good agreement of these results with the experimental and previous theoretical data suggests that our method is reliable and can be used to study fullerene hydrogenation.

Modeling the Histidine–Phenylalanine Interaction: The NH···π Hydrogen Bond of Imidazole·Benzene

NH···π hydrogen bonds occur frequently between the amino acid side groups in proteins and peptides. Data-mining studies of protein crystals find that ∼80% of the T-shaped histidine···aromatic contacts are CH···π, and only ∼20% are NH···π interactions. We investigated the infrared (IR) and ultraviolet (UV) spectra of the supersonic-jet-cooled imidazole·benzene (Im·Bz) complex as a model for the NH···π interaction between histidine and phenylalanine. Ground- and excited-state dispersion-corrected density functional calculations and correlated methods (SCS-MP2 and SCS-CC2) predict that Im·Bz has a Cs-symmetric T-shaped minimum-energy structure with an NH···π hydrogen bond to the Bz ring; the NH bond is tilted 12° away from the Bz C6 axis. IR depletion spectra support the T-shaped geometry: The NH stretch vibrational fundamental is red shifted by -73 cm(-1) relative to that of bare imidazole at 3518 cm(-1), indicating a moderately strong NH···π interaction. While the S0(A1g) → S1(B2u) origin of benzene at 38 086 cm(–1) is forbidden in the gas phase, Im·Bz exhibits a moderately intense S0 → S1 origin, which appears via the D(6h) → Cs symmetry lowering of Bz by its interaction with imidazole. The NH···π ground-state hydrogen bond is strong, De=22.7 kJ/mol (1899 cm–1). The combination of gas-phase UV and IR spectra confirms the theoretical predictions that the optimum Im·Bz geometry is T shaped and NH···π hydrogen bonded. We find no experimental evidence for a CH···π hydrogen-bonded ground-state isomer of Im·Bz. The optimum NH···π geometry of the Im·Bz complex is very different from the majority of the histidine·aromatic contact geometries found in protein database analyses, implying that the CH···π contacts observed in these searches do not arise from favorable binding interactions but merely from protein side-chain folding and crystal-packing constraints. The UV and IR spectra of the imidazole·(benzene)2 cluster are observed via fragmentation into the Im·Bz+ mass channel. The spectra of Im·Bz and Im·Bz2 are cleanly separable by IR hole burning. The UV spectrum of Im·Bz2 exhibits two 000 bands corresponding to the S0 → S1 excitations of the two inequivalent benzenes, which are symmetrically shifted by -86/+88 cm(-1) relative to the 000 band of benzene

Structure revision of plakotenin based on computational investigation of transition states and spectroscopic properties.

We show that the previously [Tetrahedron Lett.1992, 33, 2579] proposed structure of natural plakotenin must be revised. Recently, the total synthesis of plakotenin was achieved via an intramolecular Diels-Alder reaction from a (E,E,Z,E)-tetraene as linear precursor. Using density functional theory, the computation of the four possible transition states for this reaction shows that the previously proposed structure could only have been formed via an energetically high-lying transition state, which is very unlikely. Instead, we suggest that the structure of plakotenin corresponds to the product formed via the lowest transition state. A comparison of experimental and theoretical optical rotation, circular dichroism, and two-dimensional nuclear Overhauser enhancement spectra conclusively proves that the structure of plakotenin is the one that is suggested by the transition state computations. Moreover, the simulation of the nuclear Overhauser enhancement spectra suggests that it is most likely that the misassignment of the (1)H chemical shifts of two methyl groups has led to the wrong structure prediction in the 1992 work. The previously proposed structure of iso-plakotenin remains unaffected by our structure revision, but the structures of homo- and nor-plakotenin must also be revised. The present work shows how the total synthesis of a natural product, together with the theoretical determination of the barrier heights of the reactions involved, can be of great help to assign its structure. It appears that intramolecular Diels-Alder reactions can be modeled accurately by todays first-principles methods of quantum chemistry.

Derivatives and dimers of C50-D5h and C50-D3: a comparison of two closely related but quite differently behaving fullerenes.

A density functional theory study on the reactivity of the energetically most stable C(50) isomers, C(50)-D(5h) and C(50)-D(3), is presented. We explore the reactivity of both fullerenes towards the addition of hydrogen and halogen atoms and towards the formation of dimers. The addition patterns of the derivatives C(50)X(2n) (X = H, F, Cl) that are preferably formed after the saturation of the most reactive sites are investigated as well. The study reveals that while the results for C(50)-D(5h) are in agreement with simple empirical rules, C(50)-D(3) does not show the expected behaviour.

The plakotenins: biomimetic Diels-Alder reactions, total synthesis, structural investigations, and chemical biology.

The total synthesis of plakotenin, a cytotoxic marine natural product, using a biomimetic Diels-Alder reaction is described in detail. Two approaches were used, whereby the Diels-Alder reaction occurs at different stages of the synthesis. Homo- and nor-plakotenin, related natural products, were also prepared, as well as iso-plakotenin, a diastereoisomer of plakotenin. The syntheses prove the relative and absolute stereochemistry of the latter. The chemical biology of the plakotenins was investigated on selected compounds.