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Featured researches published by Anna B. Harper.


New Phytologist | 2013

Confronting model predictions of carbon fluxes with measurements of Amazon forests subjected to experimental drought

Thomas L. Powell; David Galbraith; Bradley Christoffersen; Anna B. Harper; Hewlley Maria Acioli Imbuzeiro; Lucy Rowland; Samuel Almeida; Paulo M. Brando; Antonio Carlos Lola da Costa; Marcos Heil Costa; Naomi M. Levine; Yadvinder Malhi; Scott R. Saleska; Eleneide Doff Sotta; Mathew Williams; Patrick Meir; Paul R. Moorcroft

Considerable uncertainty surrounds the fate of Amazon rainforests in response to climate change. Here, carbon (C) flux predictions of five terrestrial biosphere models (Community Land Model version 3.5 (CLM3.5), Ecosystem Demography model version 2.1 (ED2), Integrated BIosphere Simulator version 2.6.4 (IBIS), Joint UK Land Environment Simulator version 2.1 (JULES) and Simple Biosphere model version 3 (SiB3)) and a hydrodynamic terrestrial ecosystem model (the Soil-Plant-Atmosphere (SPA) model) were evaluated against measurements from two large-scale Amazon drought experiments. Model predictions agreed with the observed C fluxes in the control plots of both experiments, but poorly replicated the responses to the drought treatments. Most notably, with the exception of ED2, the models predicted negligible reductions in aboveground biomass in response to the drought treatments, which was in contrast to an observed c. 20% reduction at both sites. For ED2, the timing of the decline in aboveground biomass was accurate, but the magnitude was too high for one site and too low for the other. Three key findings indicate critical areas for future research and model development. First, the models predicted declines in autotrophic respiration under prolonged drought in contrast to measured increases at one of the sites. Secondly, models lacking a phenological response to drought introduced bias in the sensitivity of canopy productivity and respiration to drought. Thirdly, the phenomenological water-stress functions used by the terrestrial biosphere models to represent the effects of soil moisture on stomatal conductance yielded unrealistic diurnal and seasonal responses to drought.


Reviews of Geophysics | 2015

Spatiotemporal patterns of terrestrial gross primary production: A review

Alessandro Anav; Pierre Friedlingstein; Christian Beer; Philippe Ciais; Anna B. Harper; Chris D. Jones; Guillermo Murray-Tortarolo; Dario Papale; N. C. Parazoo; Philippe Peylin; Shilong Piao; Stephen Sitch; Nicolas Viovy; Andy Wiltshire; Maosheng Zhao

Great advances have been made in the last decade in quantifying and understanding the spatiotemporal patterns of terrestrial gross primary production (GPP) with ground, atmospheric, and space observations. However, although global GPP estimates exist, each data set relies upon assumptions and none of the available data are based only on measurements. Consequently, there is no consensus on the global total GPP and large uncertainties exist in its benchmarking. The objective of this review is to assess how the different available data sets predict the spatiotemporal patterns of GPP, identify the differences among data sets, and highlight the main advantages/disadvantages of each data set. We compare GPP estimates for the historical period (1990–2009) from two observation-based data sets (Model Tree Ensemble and Moderate Resolution Imaging Spectroradiometer) to coupled carbon-climate models and terrestrial carbon cycle models from the Fifth Climate Model Intercomparison Project and TRENDY projects and to a new hybrid data set (CARBONES). Results show a large range in the mean global GPP estimates. The different data sets broadly agree on GPP seasonal cycle in terms of phasing, while there is still discrepancy on the amplitude. For interannual variability (IAV) and trends, there is a clear separation between the observation-based data that show little IAV and trend, while the process-based models have large GPP variability and significant trends. These results suggest that there is an urgent need to improve observation-based data sets and develop carbon cycle modeling with processes that are currently treated either very simplistically to correctly estimate present GPP and better quantify the future uptake of carbon dioxide by the worlds vegetation.


Geophysical Research Letters | 2010

Role of deep soil moisture in modulating climate in the Amazon rainforest

Anna B. Harper; A. Scott Denning; Ian T. Baker; Mark Branson; Lara Prihodko; David A. Randall

Received 28 December 2009; accepted 19 January 2010; published 2 March 2010. [1] Both local and large‐scale processes affect the Amazon hydrologic cycle. We investigate the impact of deep soils on the atmosphere through local feedbacks. The Simple Biosphere model, version 3 (SiB3), is coupled to a single column model. Historically, land surface schemes parameterize soil moisture stress based on shallow soils and incorrectly capture seasonal cycles in the Amazon. Following observations, SiB3 is updated to allow deep roots to access soil moisture at depth. The new (“Unstressed”) version of SiB3 has a stronger hydrologic cycle, with increased evapotranspiration and moisture export during the dry season. The boundary layer responds through changes in its depth, relative humidity, and turbulent kinetic energy, and these changes feed back to influence wet season onset and intensity. Differences in atmospheric latent heating could affect circulation in a global model. The results have important consequences for modeling the Amazon hydrologic cycle and climate in global climate models. Citation: Harper, A. B., A. S. Denning, I. T. Baker, M. D. Branson, L. Prihodko, andD.A.Randall (2010),Roleof deepsoil moistureinmodulatingclimateintheAmazonrainforest,Geophys.Res.Lett.,


Journal of Climate | 2014

Impact of Evapotranspiration on Dry Season Climate in the Amazon Forest

Anna B. Harper; Ian T. Baker; D Avid A. Randall; Mark Branson

Moisture recycling can be an important source of rainfall over the Amazon forest, but this process relies heavily upon the ability of plants to access soil moisture. Evapotranspiration (ET) in the Amazon is often maintained or even enhanced during the dry season, when net radiation is high. However, ecosystem models often over predict the dry season water stress. The authors removed unrealistic water stress in an ecosystem model [the Simple Biosphere Model, version 3 (SiB3)] and examined the impacts of enhanced ET on the dry season climate when coupled to a GCM. The ‘‘stressed’’ model experiences dry season water stress and limitations on ET, while the ‘‘unstressed’’ model has enhanced root water access and exhibits strong drought tolerance. During the dry season in the southeastern Amazon, SiB3 unstressed has significantly higher latent heat flux (LH) and lower sensible heat flux (SH) than SiB3 stressed. There are two competing impacts on the climate in SiB3 unstressed: cooling resulting fromlower SHand moistening resulting fromhigher LH. During the average dry season, the cooling plays a larger role and the atmosphere is more statically stable, resulting in less precipitation than in SiB3 stressed. During dry season droughts, significantly higher LH in SiB3 unstressed is a necessary but not sufficientcondition for stronger precipitation. The moistening effect of LHdominates when the Bowen ratio (BR 5 SH/LH) is .1.0 in SiB3 stressed and precipitation is up to 26% higher in SiB3 unstressed. Animplication of thisanalysis isthatforest conservationcould enabletheAmazontocopewith drying conditions in the future.


Global Biogeochemical Cycles | 2015

Influence of ENSO and the NAO on terrestrial carbon uptake in the Texas-northern Mexico region

N. C. Parazoo; Elizabeth A. Barnes; John R. Worden; Anna B. Harper; Kevin B. Bowman; Christian Frankenberg; Sebastian Wolf; Marcy E. Litvak; Trevor F. Keenan

Climate extremes such as drought and heat waves can cause substantial reductions in terrestrial carbon uptake. Advancing projections of the carbon uptake response to future climate extremes depends on (1) identifying mechanistic links between the carbon cycle and atmospheric drivers, (2) detecting and attributing uptake changes, and (3) evaluating models of land response and atmospheric forcing. Here, we combine model simulations, remote sensing products, and ground observations to investigate the impact of climate variability on carbon uptake in the Texas-northern Mexico region. Specifically, we (1) examine the relationship between drought, carbon uptake, and variability of El Nino–Southern Oscillation (ENSO) and the North Atlantic Oscillation (NAO) using the Joint UK Land-Environment Simulator (JULES) biosphere simulations from 1950–2012, (2) quantify changes in carbon uptake during record drought conditions in 2011, and (3) evaluate JULES carbon uptake and soil moisture in 2011 using observations from remote sensing and a network of flux towers in the region. Long-term simulations reveal systematic decreases in regional-scale carbon uptake during negative phases of ENSO and NAO, including amplified reductions of gross primary production (GPP) (−0.42 ± 0.18 Pg C yr−1) and net ecosystem production (NEP) (−0.14 ± 0.11 Pg C yr−1) during strong La Nina years. The 2011 megadrought caused some of the largest declines of GPP (−0.50 Pg C yr−1) and NEP (−0.23 Pg C yr−1) in our simulations. In 2011, consistent declines were found in observations, including high correlation of GPP and surface soil moisture (r = 0.82 ± 0.23, p = 0.012) in remote sensing-based products. These results suggest a large-scale response of carbon uptake to ENSO and NAO, and highlight a need to improve model predictions of ENSO and NAO in order to improve predictions of future impacts on the carbon cycle and the associated feedbacks to climate change.


Global Change Biology | 2017

Challenging terrestrial biosphere models with data from the long-term multifactor Prairie Heating and CO2 Enrichment experiment

Martin G. De Kauwe; Belinda E. Medlyn; Anthony P. Walker; Sönke Zaehle; Shinichi Asao; Bertrand Guenet; Anna B. Harper; Thomas Hickler; Atul K. Jain; Yiqi Luo; Xingjie Lu; Kristina A. Luus; William J. Parton; Shijie Shu; Ying Ping Wang; Christian Werner; Jianyang Xia; Elise Pendall; Jack A. Morgan; Edmund Ryan; Yolima Carrillo; Feike A. Dijkstra; Tamara J. Zelikova; Richard J. Norby

Abstract Multifactor experiments are often advocated as important for advancing terrestrial biosphere models (TBMs), yet to date, such models have only been tested against single‐factor experiments. We applied 10 TBMs to the multifactor Prairie Heating and CO2 Enrichment (PHACE) experiment in Wyoming, USA. Our goals were to investigate how multifactor experiments can be used to constrain models and to identify a road map for model improvement. We found models performed poorly in ambient conditions; there was a wide spread in simulated above‐ground net primary productivity (range: 31–390 g C m−2 yr−1). Comparison with data highlighted model failures particularly with respect to carbon allocation, phenology, and the impact of water stress on phenology. Performance against the observations from single‐factors treatments was also relatively poor. In addition, similar responses were predicted for different reasons across models: there were large differences among models in sensitivity to water stress and, among the N cycle models, N availability during the experiment. Models were also unable to capture observed treatment effects on phenology: they overestimated the effect of warming on leaf onset and did not allow CO2‐induced water savings to extend the growing season length. Observed interactive (CO2 × warming) treatment effects were subtle and contingent on water stress, phenology, and species composition. As the models did not correctly represent these processes under ambient and single‐factor conditions, little extra information was gained by comparing model predictions against interactive responses. We outline a series of key areas in which this and future experiments could be used to improve model predictions of grassland responses to global change.


Global Change Biology | 2017

Gross primary production responses to warming, elevated CO2, and irrigation: quantifying the drivers of ecosystem physiology in a semiarid grassland

Edmund Ryan; Kiona Ogle; Drew M. P. Peltier; Anthony P. Walker; Martin G. De Kauwe; Belinda E. Medlyn; David G. Williams; William J. Parton; Shinichi Asao; Bertrand Guenet; Anna B. Harper; Xingjie Lu; Kristina A. Luus; Sönke Zaehle; Shijie Shu; Christian Werner; Jianyang Xia; Elise Pendall

Abstract Determining whether the terrestrial biosphere will be a source or sink of carbon (C) under a future climate of elevated CO2 (eCO2) and warming requires accurate quantification of gross primary production (GPP), the largest flux of C in the global C cycle. We evaluated 6 years (2007–2012) of flux‐derived GPP data from the Prairie Heating and CO2 Enrichment (PHACE) experiment, situated in a grassland in Wyoming, USA. The GPP data were used to calibrate a light response model whose basic formulation has been successfully used in a variety of ecosystems. The model was extended by modeling maximum photosynthetic rate (Amax) and light‐use efficiency (Q) as functions of soil water, air temperature, vapor pressure deficit, vegetation greenness, and nitrogen at current and antecedent (past) timescales. The model fits the observed GPP well (R2 = 0.79), which was confirmed by other model performance checks that compared different variants of the model (e.g. with and without antecedent effects). Stimulation of cumulative 6‐year GPP by warming (29%, P = 0.02) and eCO2 (26%, P = 0.07) was primarily driven by enhanced C uptake during spring (129%, P = 0.001) and fall (124%, P = 0.001), respectively, which was consistent across years. Antecedent air temperature (Tairant) and vapor pressure deficit (VPDant) effects on Amax (over the past 3–4 days and 1–3 days, respectively) were the most significant predictors of temporal variability in GPP among most treatments. The importance of VPDant suggests that atmospheric drought is important for predicting GPP under current and future climate; we highlight the need for experimental studies to identify the mechanisms underlying such antecedent effects. Finally, posterior estimates of cumulative GPP under control and eCO2 treatments were tested as a benchmark against 12 terrestrial biosphere models (TBMs). The narrow uncertainties of these data‐driven GPP estimates suggest that they could be useful semi‐independent data streams for validating TBMs. &NA; Determining whether the terrestrial biosphere will be a source or sink of carbon (C) under a future climate of elevated CO2 (eCO2) and warming requires accurate quantification of gross primary production (GPP), the largest flux of C in the global C cycle. We evaluated 6 years (2007–2012) of flux‐derived GPP data from the Prairie Heating and CO2 Enrichment (PHACE) experiment, situated in a grassland in Wyoming, USA. The GPP data were used to calibrate a light‐response model whose basic formulation has been successfully used in a variety of ecosystems. Stimulation of cumulative 6‐year GPP by warming (29%, P = 0.02) and eCO2 (26%, P = 0.07) was primarily driven by enhanced C uptake during spring (129%, P = 0.001) and fall (124%, P = 0.001), respectively, which was consistent across years. Antecedent air temperature (Tairant) and vapor pressure deficit (VPDant) effects were the most significant predictors of temporal variability in GPP among most treatments. Figure. No caption available.


Geophysical Research Letters | 2017

Multi vegetation model evaluation of the Green Sahara climate regime

Peter O. Hopcroft; Paul J. Valdes; Anna B. Harper; David J. Beerling

During the Quaternary, the Sahara desert was periodically colonized by vegetation, likely because of orbitally induced rainfall increases. However, the estimated hydrological change is not reproduced in climate model simulations, undermining confidence in projections of future rainfall. We evaluated the relationship between the qualitative information on past vegetation coverage and climate for the mid-Holocene using three different dynamic vegetation models. Compared with two available vegetation reconstructions, the models require 500–800 mm of rainfall over 20°–25°N, which is significantly larger than inferred from pollen but largely in agreement with more recent leaf wax biomarker reconstructions. The magnitude of the response also suggests that required rainfall regime of the early to middle Holocene is far from being correctly represented in general circulation models. However, intermodel differences related to moisture stress parameterizations, biases in simulated present-day vegetation, and uncertainties about paleosoil distributions introduce uncertainties, and these are also relevant to Earth system model simulations of African humid periods.


Progress in Physical Geography | 2018

Recent progress in understanding climate thresholds: Ice sheets, the Atlantic meridional overturning circulation, tropical forests and responses to ocean acidification

Peter Good; Jonathan L. Bamber; Kate Halladay; Anna B. Harper; Laura Jackson; Gillian Kay; Bart Kruijt; Jason Lowe; Oliver L. Phillips; Jeff Ridley; Meric A. Srokosz; Cm Turley; Phillip Williamson

This article reviews recent scientific progress, relating to four major systems that could exhibit threshold behaviour: ice sheets, the Atlantic meridional overturning circulation (AMOC), tropical forests and ecosystem responses to ocean acidification. The focus is on advances since the Intergovernmental Panel on Climate Change Fifth Assessment Report (IPCC AR5). The most significant developments in each component are identified by synthesizing input from multiple experts from each field. For ice sheets, some degree of irreversible loss (timescales of millennia) of part of the West Antarctic Ice Sheet (WAIS) may have already begun, but the rate and eventual magnitude of this irreversible loss is uncertain. The observed AMOC overturning has decreased from 2004–2014, but it is unclear at this stage whether this is forced or is internal variability. New evidence from experimental and natural droughts has given greater confidence that tropical forests are adversely affected by drought. The ecological and socio-economic impacts of ocean acidification are expected to greatly increase over the range from today’s annual value of around 400, up to 650 ppm CO2 in the atmosphere (reached around 2070 under RCP8.5), with the rapid development of aragonite undersaturation at high latitudes affecting calcifying organisms. Tropical coral reefs are vulnerable to the interaction of ocean acidification and temperature rise, and the rapidity of those changes, with severe losses and risks to survival at 2 °C warming above pre-industrial levels. Across the four systems studied, however, quantitative evidence for a difference in risk between 1.5 and 2 °C warming above pre-industrial levels is limited.


Nature Geoscience | 2018

Carbon budgets for 1.5 and 2 °C targets lowered by natural wetland and permafrost feedbacks

Edward Comyn-Platt; Garry D. Hayman; Chris Huntingford; Sarah Chadburn; Eleanor J. Burke; Anna B. Harper; W. J. Collins; Christopher P. Webber; Tom Powell; Peter M. Cox; Nicola Gedney; Stephen Sitch

Global methane emissions from natural wetlands and carbon release from permafrost thaw have a positive feedback on climate, yet are not represented in most state-of-the-art climate models. Furthermore, a fraction of the thawed permafrost carbon is released as methane, enhancing the combined feedback strength. We present simulations with an inverted intermediate complexity climate model, which follows prescribed global warming pathways to stabilization at 1.5 or 2.0 °C above pre-industrial levels by the year 2100, and which incorporates a state-of-the-art global land surface model with updated descriptions of wetland and permafrost carbon release. We demonstrate that the climate feedbacks from those two processes are substantial. Specifically, permissible anthropogenic fossil fuel CO2 emission budgets are reduced by 9–15% (25–38 GtC) for stabilization at 1.5 °C, and 6–10% (33–52 GtC) for 2.0 °C stabilization. In our simulations these feedback processes respond more quickly at temperatures below 1.5 °C, and the differences between the 1.5 and 2 °C targets are disproportionately small. This key finding holds for transient emission pathways to 2100 and does not account for longer-term implications of these feedback processes. We conclude that natural feedback processes from wetlands and permafrost must be considered in assessments of transient emission pathways to limit global warming.Climate feedbacks associated with wetland methane emissions and permafrost-thaw carbon release substantially reduce available carbon budgets to achieve temperature targets, suggest simulations with a climate–land-surface model system.

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Benjamin Poulter

Goddard Space Flight Center

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Philippe Ciais

Centre national de la recherche scientifique

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