Anna Torelli

Quality control of saffron (Crocus sativus L.): development of SCAR markers for the detection of plant adulterants used as bulking agents.

A method based on sequence-characterized amplified regions (SCARs) was developed from random amplified polymorphic DNA markers (RAPDs) specific for Arnica montana L., Bixa orellana L., Calendula officinalis L., Carthamus tinctorius L., Crocus vernus L. (Hill), Curcuma longa L., and Hemerocallis sp. to detect these common bulking agents in commercial saffron (Crocus sativus). The method enabled the unequivocal detection of low amounts (up to 1%) of each adulterant, allowing the preemptive rejection of suspect samples. Its enforcement limits the number of samples to be subjected to further evaluation with pharmacognostic or phytochemical analyses, especially when multiple batches have to be evaluated in a short time. The dimension of the amplicons is suitable for the analysis of degraded DNA obtained from dried, stored, processed, and finely ground commercial material. Proper SCAR markers may represent a fast, sensitive, reliable, and low-cost screening method for the authentication of dried commercial saffron material.

RAPD-Based Method for the Quality Control of Mediterranean Oregano and Its Contribution to Pharmacognostic Techniques

A pharmacognostic survey of 84 commercial samples of Mediterranean oregano, obtained from wholesale traders between 2001 and 2007, pinpointed the presence of extraneous plant material in 90.5% of the samples. In 59% of them extraneous material of plant origin was above 20%. Two major groups of botanical foreign matter were identified: oregano-like flavored plants ( Satureja montana L., Origanum majorana L.) and plants lacking a clearly detectable essential oil profile ( Rubus sp., Cistus incanus L., Rhus coriaria L.), added as bulk extraneous material. A random amplified polymorphic DNA (RAPD) method was developed to make the detection of the second group of adulterants easier and speed pharmacognostic analysis of large batches of samples. Thirteen primers discriminating between Origanum spp. and Rubus caesius , R.coriaria, and C. incanus were individuated, allowing their detection in oregano samples with a limit of detection of 1%. The utilization of RAPD as a reliable test to probe the authenticity of Mediterranean oregano or previously screen the presence of specific contaminants is proposed as a complementary approach to pharmacognostic and phytochemical screening.

Early phases in in vitro culture of tomato cotyledons: Starch accumulation and protein pattern in relation to the hormonal treatment

SummaryTomato cotyledon explants, cultured in vitro in the presence of sucrose, were subjected to different hormonal treatments to establish whether the induction of different organogenic programmes could be correlated with differences in starch accumulation and protein electrophoretic pattern. The cytohistological changes in explants over the first 15 days of culture were studied by light and electron microscopy. It was found that starch accumulation occurs under all conditions, though varying in duration and amount. Over the first 2 days of culture the protein electrophoretic pattern changes in a similar way under all conditions, while after 7 days changes take place which are probably related to the different developmental programmes induced by the treatments.

Auxin structure and activity on tomato morphogenesis in vitro and pea stem elongation

In order to understand better the relationship between auxin structure and activity on morphogenesis and cell elongation, six different auxins were tested on the regeneration of tomato (Lycopersicon esculentum Miller var. Alice) from cotyledons and on pea (Pisum sativum L. var. Alaska) stem elongation. The auxins were: indole-3-acetic acid (IAA), indole-3-butyric acid (IBA), 1, 2-benzisoxazole-3-acetic acid (BOA), 1,2-benzisothiazole-3-acetic acid (BIA), 1-naphthalenacetic acid (NAA), 2,4-dichlorophenoxyacetic acid (2,4-D). All these compounds obey the minimum requirement rules for auxin activity and all were effective on cell elongation. At the dose of 10 μM and in the absence of cytokinin, they all, except 2,4-D, induced roots, while in the presence of cytokinin they induced shoots, roots, hairy root-like filaments (HRLF) or callus depending on their concentration. The morphogenetic pattern did not change by varying cytokinin concentration. We conclude that auxin structure plays a minor role in morphogenesis or cell elongation, because it is only responsible for variations in the level of auxin activity.

Cytokinin-like activity of N'-substituted N-phenylureas

We have synthesized 14 N-phenylurea derivatives, differing in theheterocyclic portion linked in N′-position, and tested theircytokinin-like activity. Three different bioassays were used: the chlorophylllevel determination test, the bioassay for the expression of hormone-inducedchimeric Pg5-GUS gene and the tomato regeneration test, in which1,2-benzisoxazole-3-acetic acid (BOAA) was utilized as auxin. Thecytokinin-likeactivity showed by three of these compounds in the regeneration assay seems tobe related to their different heterocyclic nature. Results obtained indicatethat the N-phenyl-N′-1,3,4-thiadiazol-2-ylurea (compound 4), an isomer ofN-phenyl-N′-1,2,3-thiadiazol-5-ylurea (thidiazuron, TDZ), in the absenceof auxin induces shoot regeneration in the 34,2% of the explantscultured; theN-phenyl-N′-(3-chloro-1,2-benzisothiazol-7-yl) urea (compound 10),structurally different from TDZ, in the absence of auxin induces shootregeneration in the 25,9% of explants, significantly lower than that ofTDZ (68,8%). N-phenyl-N′-benzothiazol-6-ylurea (compound 13),structurally different from TDZ, in the absence of auxin induces the99,5% of shoot regeneration, significantly different from that of theother substances. The addition of auxin in the cotyledon regeneration assayreduces the differences. The compound 13 could be considered a new phenylureaderivative with a highly specific cytokinin-like activity.

New potential markers of in vitro tomato morphogenesis identified by mRNA differential display

The identification of plant genes involved in early phases of in vitro morphogenesis can not only contribute to our understanding of the processes underlying growth regulator-controlled determination, but also provide novel markers for evaluating the outcome of in vitro regeneration experiments. To search for such genes and to monitor changes in gene expression accompanying in vitro regeneration, we have adapted the mRNA differential display technique to the comparative analysis of a model system of tomato cotyledons that can be driven selectively toward either shoot or callus formation by means of previously determined growth regulator supplementations. Hormone-independent transcriptional modulation (mainly down-regulation) has been found to be the most common event, indicating that a non-specific reprogramming of gene expression quantitatively predominates during the early phases of in vitro culture. However, cDNA fragments representative of genes that are either down-regulated or induced in a programme-specific manner could also be identified, and two of them (G35, G36) were further characterized. One of these cDNA fragments, G35, corresponds to an mRNA that is down-regulated much earlier in callus- (day 2) than in shoot-determined explants (day 6). The other, G36, identifies an mRNA that is transiently expressed in shoot-determined explants only, well before any macroscopic signs of differentiation become apparent, and thus exhibits typical features of a morphogenetic marker.

Effects of benzisoxazole and benzisothiazole on tomato plant regeneration in vitro.

The effects of two synthetic auxins, BOA and BIA, on plant regeneration in vitro have been studied on explants of tomato cotyledons. The activity of these substances on cell elongation has also been tested on pea stem segments. It has been found that BOA is particularly effective in inducing the formation of shoots but has a weak activity on cell elongation, while BIA, which is more effective in inducing cell elongation, is less active in morphogenesis. It is concluded that (1) the two activities are not related to each other, (2) the receptors involved in the two processes are probably different, (3) thechemical structure of the auxin may be an important factor in organogenetic processes.

In vitro micropropagation of the aquatic fern Marsilea quadrifolia L. and genetic stability assessment by RAPD markers

In order to conserve and multiply the aquatic fern Marsilea quadrifolia L., in a long-term in vitro procedure, the effects of different cytokinins, i.e., 6-benzylaminopurine, zeatine riboside, and N6-(2-isopentenyl)adenine, were investigated, varying their concentration and period of supplementation. No clear stimulatory effect on the de novo nodes produced per explant was detected when compared with hormone-free (HF) condition. On the contrary, the rhizome explant micropropagation was inhibited, the inhibition decreasing with the decreasing strength of cytokinins, though without reaching any significant enhancement. Since, as a consequence of the tissue culture procedure, the occurrence of somaclonal variation may introduce genomic alterations, genetic stability was assessed by random amplified polymorphic DNA (RAPD) analysis by comparing eight randomly selected micropropagated plants derived from repeated subcultures, with donor plant. Eighteen different primers generated 189 bands ranging from 100 to 3250 bp, and the same banding profiles were exhibited. No genomic alterations were evidenced in any of the micropropagated plants. Well-developed micropropagated plants were also successfully acclimatized under greenhouse condition. These positive results suggest that the in vitro HF micropropagation could be useful in the development of ex situ conservation programs of M. quadrifolia, even in order to possibly reintroduce the plants in their natural environment.

Authentication of Punica granatum L.: development of SCAR markers for the detection of 10 fruits potentially used in economically motivated adulteration

The large commercial success of pomegranate increase the likelihood of economically motivated adulteration (EMA), which has been gradually spotted with the undeclared addition of anthocyanin-rich plants or cheaper fruit juices used as bulking and diluting agents. A method based on Sequence-Characterized Amplified Regions (SCARs) was developed to detect the presence of Aristotelia chilensis, Aronia melanocarpa, Dioscorea alata, Euterpe oleracea, Malus×domestica, Morus nigra, Sambucus nigra, Vaccinium macrocarpon, Vaccinium myrtillus, Vitis vinifera as bulking agents in Punica granatum. The method enabled the unequivocal detection of up to 1% of each adulterant, allowing the preemptive rejection of suspect samples. The recourse to such method may reduce the number of samples to be subjected to further phytochemical analyses when multiple batches have to be evaluated in a short time. Vice versa, it allows the cross-check of suspect batches previously tested only for their anthocyanin profile. The dimension of the amplicons is suitable for the analysis of degraded DNA obtained from stored and processed commercial material. Proper SCAR markers may represent a fast, sensitive, reliable and low-cost screening method for the authentication of processed commercial pomegranate material.

Identification of S2-T A63: a cDNA fragment corresponding to a gene differentially expressed in a Cr-tolerant strain of the unicellular green alga Scenedesmus acutus.

The gene expression of the wild type (S2-N) and a Cr-tolerant strain (S2-T) of the unicellular green alga Scenedesmus acutus has been compared in order to get more insight on their different chromium sensitivity. The RNA of the two strains was extracted after 4 days of culture in standard medium without chromium and analyzed by means of RNA differential display. The two strains showed differential gene transcription even in the absence of the heavy metal and six putatively differential amplicons were evidenced in the Cr-tolerant strain. Among the isolated amplicons, S2-T A63 was much more pronouncedly transcribed in the tolerant than in the wild type strain and was further characterized. S2-T A63 corresponding gene is present with the same copy number in the wild type and tolerant genomes and corresponds to an mRNA of about 2000 nt. The corresponding transcript is overexpressed in the Cr-tolerant strain after a 4-day culture and is not up-regulated by chromium exposure. The S2-T A63 sequence, obtained up to now, does not show significant homologies with any known gene. However, the analysis of the putative translation product reveals the presence of an interrupted fasciclin domain. This extracellular domain has been found in proteins from mammals, insects, echinoderms, plants, yeast and bacteria and is usually involved in cell adhesion. This finding suggests that the product for the S2-T A63 translation has an extracellular collocation, maybe as surface or secreted protein involved in external chromium detoxification.