Annamaria Vercesi

Environmental profile of paddy rice cultivation with different straw management.

Italy is the most important European country in terms of paddy rice production. North Italian districts such as Vercelli, Pavia, Novara, and Milano are known as some of the worlds most advanced rice cultivation sites. In 2013 Italian rice cultivation represented about 50% of all European rice production by area, and paddy fields extended for over 216,000 ha. Cultivation of rice involves different agricultural activities which have environmental impacts mainly due to fossil fuels and agrochemical requirements as well as the methane emission associated with the fermentation of organic material in the flooded rice fields. In order to assess the environmental consequences of rice production in the District of Vercelli, the cultivation practices most frequently carried out were inventoried and evaluated. The general approach of this study was not only to gather the inventory data for rice production and quantify their environmental impacts, but also to identify the key environmental factors where special attention must be paid. Life Cycle Assessment methodology was applied in this study from a cradle-to-farm gate perspective. The environmental profile was analyzed in terms of seven different impact categories: climate change, ozone depletion, human toxicity, terrestrial acidification, freshwater eutrophication, marine eutrophication, and fossil depletion. Regarding straw management, two different scenarios (burial into the soil of the straw versus harvesting) were compared. The analysis showed that the environmental impact was mainly due to field emissions, the fuel consumption needed for the mechanization of field operations, and the drying of the paddy rice. The comparison between the two scenarios highlighted that the collection of the straw improves the environmental performance of rice production except that for freshwater eutrophication. To improve the environmental performance of rice production, solutions to save fossil fuel and reduce the emissions from fertilizers (leaching, volatilization) as well as methane emissions should be implemented.

A cytological and ultrastructural study on the maturation and germination of oospores of Plasmopara viticola from overwintering vine leaves

Observations on cytological and ultrastructural changes in Plasmopara viticola oospores were carried out during the overwintering period. Three types of oospores were observed. Type I, characterized by a thin inner oospore wall (IOW), large lipid globules and two nuclei, was recovered only in samples collected in October. These oospores were considered to be immature. Maturation occurred during November and involved a noticeable increase in thickness of the IOW, fusion of nuclei, formation of an ooplast and break up of large lipid globules into smaller ones (type II oospores). A few oospores (type III) showed abnormal organization with very large lipid globules and less frequently discernible nuclei. IOW solubilization, dissolution of the ooplast and lipid globules and nuclear division were the first detectable events during oospore germination. Germinating oospores produce a germ tube which was terminated by a sporangium. In its young stage, the sporangium had a thick wall and an unusual multi-layered membrane. During this phase, nuclear divisions took place in the sporangium. While sporangium development progressed, the ribosome density in the cytoplasm decreased and mitochondria, initially roundish with evident cristae, became their usual tubular profile. The plasma membrane had a typical structure and storage organelles, such as finger print vacuoles and lipid globules, became more numerous in the cytoplasm. Larger vacuoles contained the flagella of differentiating zoospores.

A new approach to modelling the dynamics of oospore germination in Plasmopara viticola

Oospores, the only overwintering structures of Plasmopara viticola, the causal agent of grapevine downy mildew, are the unique source of inoculum for primary infections in vineyards. We show that their germination dynamics depend on both climatic and endogenous factors. In particular, overwintering in controlled conditions suggests that low temperatures prolong the oospore germinability, while constant or gradually alternating water availability increases germination rates. However, wide fluctuations in germination percentage, observed both in naturally overwintered oospores, and under controlled conditions, indicate an important role for endogenous factors in the germination frequency. Ad hoc experimental assays and microscopic observations highlight an important role for calcium in the germination process. However, for a profound understanding of the biological mechanisms underlying oospore germination, mathematical models of the germination dynamics are needed. But, classical differential models of germination dynamics are, with current knowledge, prohibitive due both to the complexity of the underlying processes and knowledge incompleteness. Then, we propose a hybrid method derived from the integration of qualitative differential models and fuzzy systems.

Growth kinetics of Botrytis cinerea on organic acids and sugars in relation to colonization of grape berries

The relationship between hyphal growth and branching of the grape pathogen Botrytis cinerea was determined on solid media containing either glucose, fructose, sucrose, tartaric acid or malic acid. The concentration of the carbon source had little effect on specific growth rate or the specific rate of tip formation, but growth was inhibited at high concentrations of tartaric and malic acids. Hyphal growth unit length and hyphal extension rate increased with increasing sugar concentration and were always significantly greater than values on tartaric or malic acids. The data provide an explanation for colonization patterns of grape berries. Growth will be poor during the period from setting to the onset of ripening, when organic acids are the main carbon source produced by the berry. Following the onset of ripening, the production of sugars provides more favourable carbon sources for the fungus, enabling achievement of higher specific growth rates, greater hyphal extension rates and, hence, greater colonizing potential.

Phenotypic and histochemical traits of the interaction between Plasmopara viticola and resistant or susceptible grapevine varieties

BackgroundGrapevine downy mildew, caused by Plasmopara viticola, is a very serious disease affecting mainly Vitis vinifera cultivated varieties around the world. Breeding for resistance through the crossing with less susceptible species is one of the possible means to reduce the disease incidence and the application of fungicides. The hybrid Bianca and some of its siblings are considered very promising but their resistance level can vary depending on the pathogen strain. Moreover, virulent strains characterized by high fitness can represent a potential threat to the hybrid cultivation.ResultsThe host response and the pathogen virulence were quantitatively assessed by artificially inoculating cv Chardonnay, cv Bianca and their siblings with P. viticola isolates derived from single germinating oospores collected in various Italian viticultural areas. The host phenotypes were classified as susceptible, intermediate and resistant, according to the Area Under the Disease Progress Curve caused by the inoculated strain. Host responses in cv Bianca and its siblings significantly varied depending on the P. viticola isolates, which in turn differed in their virulence levels. The fitness of the most virulent strain did not significantly vary on the different hybrids including Bianca in comparison with the susceptible cv Chardonnay, suggesting that no costs are associated with virulence. Among the individual fitness components, only sporangia production was significantly reduced in cv Bianca and in some hybrids. Comparative histological analysis revealed differences between susceptible and resistant plants in the pathogen diffusion and cytology from 48 h after inoculation onwards. Defence mechanisms included callose depositions in the infected stomata, increase in peroxidase activity, synthesis of phenolic compounds and flavonoids and the necrosis of stomata and cells immediately surrounding the point of invasion and determined alterations in the size of the infected areas and in the number of sporangia differentiated.ConclusionsSome hybrids were able to maintain an intermediate-resistant behaviour even when inoculated with the most virulent strain. Such hybrids should be considered for further field trials.

Evolution of Qol resistance in Plasmopara viticola oospores

QoI resistance in P. viticola was first detected in France and Italy in 1999. Molecular and biological assays have been carried out since 2000 in order to provide reliable methods of detecting and quantifying resistance. Oospores were collected in vineyards located in northern and southern Italy. QoI resistance was evaluated by the germination rate of oospores on azoxystrobin amended medium and the frequency of mutant alleles in the DNA extracted from oospores. Both methods correlated to each other and were used side by side to test QoI resistance. Due to the spontaneous occurrence of the G143A mutation in wild type populations and the immigration from surrounding vineyards, resistance frequencies up to 10% were found in samples collected from vineyards never treated with QoIs. Particularly high values, about 90%, were associated with the application of five to six QoI treatments within the same season, while lower percentages, about 30%, were detected in vineyards treated with QoI used in mixture with fungicides belonging to a different resistance group. A progressive decrease of resistance frequency was observed when QoI applications were reduced in number or completely suspended for at least one season. Therefore, a full recovery of sensitivity may be achieved even in vineyards characterized by high levels of resistance, if particular care is taken during disease control by using QoIs only in mixtures and reducing the number of QoI treatments.

Mating behavior of a Northern Italian population of Fusarium verticillioides associated with maize

Fusarium verticillioides, the most common causal organism of Fusarium stalk and ear rot of maize in Northern Italy, produces important mycotoxins such as fumonisins. Reproductive biology of F. verticillioides has been widely studied in numerous maize growing areas, but up to now no information is available on the mating behavior and genetic structure of this plant pathogen in Italy. Mating type and female fertility distribution and effective population number, Ne, were assessed for a population of 181 F. verticillioides strains isolated from three fields located in Lombardia region (Northern Italy) during 2007-2008 maize growing season. The ratio of MAT-1:MAT-2 was significantly different from the theoretical 1:1 ratio expected in an idealized population in which individuals mate at random. The frequency of hermaphroditic strains was 20 % of the total population. Ne for mating type was 89 % of the count (total population) and the Ne for male or hermaphrodite status was 55 %. The number of isolates that can function as the female parent limited Ne in the examined population. Under equilibrium cycle, assuming that female fertility has been lost due to selection and mutation rate during asexual reproduction, sexual reproduction needed to occur only once per 40 to 118 asexual generations to maintain this level of sexual fertility.

Sensitivity to cymoxanil in Italian populations of Plasmopara viticola oospores.

BACKGROUND The level of sensibility towards cymoxanil was quantified by oospore germination assays in 28 populations of Plasmopara viticola (Berk. et Curt.) Berlese and De Toni sampled from different Italian regions from 2009 to 2012. RESULTS The populations showed good sensitivity levels, with EC50 values often lower than 10 mg AI L(-1) and percentages of resistant individuals lower than 16%. Only three populations, sampled at the end of the 2012 grapevine growing season, were characterised by high resistance levels. Field trials carried out in two of these vineyards showed that, at the beginning of the 2013 grapevine growing season, the EC50 values of P. viticola populations as measured in the sporangial assay were higher than those observed with oospores. At the end of the season, in plots where cymoxanil was not applied, the populations fully reverted to sensitivity, while the EC50 values remained high where 3-6 applications were performed. CONCLUSION Oospore germination assays provide valuable information on the sensitivity of populations in vineyards also at the quantitative level. The results obtained during the grapevine growing season confirm those obtained on the oospores, and that cymoxanil resistance is unstable, indirectly suggesting that the application of the fungicide according to antiresistance strategies can lead to good disease control.