Armelle Gardeisen

Crop manuring and intensive land management by Europe’s first farmers

The spread of farming from western Asia to Europe had profound long-term social and ecological impacts, but identification of the specific nature of Neolithic land management practices and the dietary contribution of early crops has been problematic. Here, we present previously undescribed stable isotope determinations of charred cereals and pulses from 13 Neolithic sites across Europe (dating ca. 5900–2400 cal B.C.), which show that early farmers used livestock manure and water management to enhance crop yields. Intensive manuring inextricably linked plant cultivation and animal herding and contributed to the remarkable resilience of these combined practices across diverse climatic zones. Critically, our findings suggest that commonly applied paleodietary interpretations of human and herbivore δ15N values have systematically underestimated the contribution of crop-derived protein to early farmer diets.

Classification of ancient mammal individuals using dental pulp MALDI-TOF MS peptide profiling

Background The classification of ancient animal corpses at the species level remains a challenging task for forensic scientists and anthropologists. Severe damage and mixed, tiny pieces originating from several skeletons may render morphological classification virtually impossible. Standard approaches are based on sequencing mitochondrial and nuclear targets. Methodology/Principal Findings We present a method that can accurately classify mammalian species using dental pulp and mass spectrometry peptide profiling. Our work was organized into three successive steps. First, after extracting proteins from the dental pulp collected from 37 modern individuals representing 13 mammalian species, trypsin-digested peptides were used for matrix-assisted laser desorption/ionization time-of-flight mass spectrometry analysis. The resulting peptide profiles accurately classified every individual at the species level in agreement with parallel cytochrome b gene sequencing gold standard. Second, using a 279–modern spectrum database, we blindly classified 33 of 37 teeth collected in 37 modern individuals (89.1%). Third, we classified 10 of 18 teeth (56%) collected in 15 ancient individuals representing five mammal species including human, from five burial sites dating back 8,500 years. Further comparison with an upgraded database comprising ancient specimen profiles yielded 100% classification in ancient teeth. Peptide sequencing yield 4 and 16 different non-keratin proteins including collagen (alpha-1 type I and alpha-2 type I) in human ancient and modern dental pulp, respectively. Conclusions/Significance Mass spectrometry peptide profiling of the dental pulp is a new approach that can be added to the arsenal of species classification tools for forensics and anthropology as a complementary method to DNA sequencing. The dental pulp is a new source for collagen and other proteins for the species classification of modern and ancient mammal individuals.

Genetic evidence for the origin of the agrimi goat (Capra aegagrus cretica)

The agrimi goat Capra aegagrus cretica is unique to Crete and its offshore islands. It has been identified as a sub-species of the wild bezoar goat Capra aegagrus aegagrus Erxleben, 1777, which it closely resembles in horn shape, body form and coloration. This classification has been disputed by some researchers who claim that the agrimi are feral goats, derived from early domestic stock brought to the island by the first Neolithic settlers. In order to clarify this issue, DNA analyses (cytochrome b and D loop sequences) were carried out on tissue of live and skeletonized agrimi and compared to sequences of wild and domestic caprines. Results conclusively show the agrimi to be a feral animal, that clades with domestic goats ( Capra hircus ) rather than with wild Asiatic bezoar. This study demonstrates that morphometric criteria do not necessarily reflect genetic affinities, and that the taxonomic classification of agrimi should be revised.

A bottom-up view of food surplus: using stable carbon and nitrogen isotope analysis to investigate agricultural strategies and diet at Bronze Age Archontiko and Thessaloniki Toumba, northern Greece

ABSTRACT We use stable isotope analysis of crop, faunal and human remains to investigate agricultural strategies and diet at EBA-LBA Archontiko and MBA-LBA Thessaloniki Toumba. Crop production strategies varied between settlements, phases and species; flexibility is also apparent within the crop stores of individual houses. Escalating manuring intensity at LBA Thessaloniki Toumba coincides with large co-residential ‘blocks’ geared towards hoarding of agricultural surpluses, spectacularly preserved by fire at nearby LBA Assiros Toumba. Faunal isotope values reflect a range of feeding strategies, including probable herding of cattle on C4-rich coastal salt marshes, evident at Archontiko through to the LBA alongside bulk cockle harvesting. Palaeodietary analysis of LBA humans at Thessaloniki Toumba indicates that C3 crops represent the only plausible staples. Millet was a minor food but may have played a particular role in the sub-adult diet. Meat probably featured in supra-household food sharing and hospitality, associated with Mycenaean-style tableware in the LBA.

Barcoding the largest animals on Earth: ongoing challenges and molecular solutions in the taxonomic identification of ancient cetaceans

Over the last few centuries, many cetacean species have witnessed dramatic global declines due to industrial overharvesting and other anthropogenic influences, and thus are key targets for conservation. Whale bones recovered from archaeological and palaeontological contexts can provide essential baseline information on the past geographical distribution and abundance of species required for developing informed conservation policies. Here we review the challenges with identifying whale bones through traditional anatomical methods, as well as the opportunities provided by new molecular analyses. Through a case study focused on the North Sea, we demonstrate how the utility of this (pre)historic data is currently limited by a lack of accurate taxonomic information for the majority of ancient cetacean remains. We then discuss current opportunities presented by molecular identification methods such as DNA barcoding and collagen peptide mass fingerprinting (zooarchaeology by mass spectrometry), and highlight the importance of molecular identifications in assessing ancient species’ distributions through a case study focused on the Mediterranean. We conclude by considering high-throughput molecular approaches such as hybridization capture followed by next-generation sequencing as cost-effective approaches for enhancing the ecological informativeness of these ancient sample sets. This article is part of the themed issue ‘From DNA barcodes to biomes’.

Ancient whale exploitation in the Mediterranean: the archaeological record

Abstract Despite a general paucity of archaeological, archaeozoological and iconographic evidence from the Upper Palaeolithic through to Late Antiquity, the corpus of whalebone finds in the Mediterranean region indicates that some level of interaction between humans and whales did indeed occur. A concentration of finds from Roman contexts suggests more active interventions in this period, especially around the Western Mediterranean and the Strait of Gibraltar—a ‘cetacean hotspot’. Whale vertebrae or scapulae were sometimes fashioned into portable chopping boards, identified from cut-marks made by fishermen or craftsmen, but whale meat and blubber may have been less important owing to abundant alternative food and fuel sources.

Forgotten Mediterranean calving grounds of grey and North Atlantic right whales: evidence from Roman archaeological records

Right whales (Eubalaena glacialis) were extirpated from the eastern North Atlantic by commercial whaling. Grey whales (Eschrichtius robustus) disappeared from the entire North Atlantic in still-mysterious circumstances. Here, we test the hypotheses that both species previously occurred in the Mediterranean Sea, an area not currently considered part of their historical range. We used ancient DNA barcoding and collagen fingerprinting methods to taxonomically identify a rare set of 10 presumed whale bones from Roman and pre-Roman archaeological sites in the Strait of Gibraltar region, plus an additional bone from the Asturian coast. We identified three right whales, and three grey whales, demonstrating that the ranges of both of these species historically encompassed the Gibraltar region, probably including the Mediterranean Sea as calving grounds. Our results significantly extend the known range of the Atlantic grey whale, and suggest that 2000 years ago, right and grey whales were common when compared with other whale species. The disappearance of right and grey whales from the Mediterranean region is likely to have been accompanied by broader ecosystem impacts, including the disappearance of their predators (killer whales) and a reduction in marine primary productivity. The evidence that these two coastal and highly accessible species were present along the shores of the Roman Empire raises the hypothesis that they may have formed the basis of a forgotten whaling industry.

Votive well or refuse tip? Chronicle of an abandonment: taphonomic study of the faunal remains of an iron age well-cistern

Abstract The well-cistern of the Iberian Fortress of Vilars (Catalonia, Spain) is a monumental feature dating to the late fifth century BCE (Vilars, phases III-IV). Management of water resources is key to interpreting the nature of the fortress, as water was essential not only for human and livestock consumption, but for irrigation, construction, and crafts. Moreover, water was integral to the site in both times of peace and war, as the structures that guaranteed provision and management coincide with facets of military architecture (moat). Yet, why was the well-cistern backfilled with animal remains and other archaeological material only a few years after its construction? To answer this and other questions, this study follows two main lines of research. Firstly, analyses were carried out on the archaeozoological remains collected inside the feature so as to interpret and characterise the nature of the assemblage. Secondly, taphonomic analyses (macro- and microscopic) were undertaken so as to reconstruct the dynamics of accumulation and the premature abandonment of the well-cistern’s primary function: supplying potable water. The results suggest that the abandonment of the well-cistern might be due in part to a drop of the groundwater level during a period of drought.

Reconstruction of Caprine Management and Landscape Use Through Dental Microwear Analysis: The Case of the Iron Age Site of El Turó de la Font de la Canya (Barcelona, Spain)

ABSTRACT This paper presents the results of a pilot study using dental microwear analysis on 23 sheep and goat teeth dated to the 6th century BC from the Iron Age site of El Turó Font de la Canya (Barcelona, Spain). This study aimed to reconstruct livestock management practices and landscape use. The dental microwear pattern indicates that sheep and goats could have been grazing in the same area where vegetation was composed of shrubs, bushes and non-graminaceous plants on an eroded landscape, although additional supplies of fodder cannot be excluded. This scenario is compatible with the archaeological and palaeoenvironmental data which suggest a possibly increased territoriality, land degradation and an increase of woodland clearance during Iron Age in the North-east of the Iberian Peninsula. Furthermore, we applied two recent microwear approaches which provide more information about mortality events and the possibility of distinguishing between an intensive and extensive management. This paper demonstrates how this method can be used to better understand animal husbandry practices and landscape use in Late Prehistory.