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Featured researches published by Arnaud Joly.


european conference on machine learning | 2014

Random forests with random projections of the output space for high dimensional multi-label classification

Arnaud Joly; Pierre Geurts; Louis Wehenkel

We adapt the idea of random projections applied to the output space, so as to enhance tree-based ensemble methods in the context of multi-label classification. We show how learning time complexity can be reduced without affecting computational complexity and accuracy of predictions. We also show that random output space projections may be used in order to reach different bias-variance tradeoffs, over a broad panel of benchmark problems, and that this may lead to improved accuracy while reducing significantly the computational burden of the learning stage.


arXiv: Machine Learning | 2014

Simple connectome inference from partial correlation statistics in calcium imaging

Antonio Sutera; Arnaud Joly; Vincent François-Lavet; Zixiao Aaron Qiu; Gilles Louppe; Damien Ernst; Pierre Geurts

This book illustrates the thrust of the scientific community to use machine learning concepts for tackling a complex problem: given time series of neuronal spontaneous activity, which is the underlying connectivity between the neurons in the network? The contributing authors also develop tools for the advancement of neuroscience through machine learning techniques, with a focus on the major open problems in neuroscience. While the techniques have been developed for a specific application, they address the more general problem of network reconstruction from observational time series, a problem of interest in a wide variety of domains, including econometrics, epidemiology, and climatology, to cite only a few. The book is designed for the mathematics, physics and computer science communities that carry out research in neuroscience problems. The content is also suitable for the machine learning community because it exemplifies how to approach the same problem from different perspectives.


Critical Care | 2015

Erratum: Elevated basal levels of circulating activated platelets predict ICU-acquired sepsis and mortality: a prospective study.

Nathalie Layios; Céline Delierneux; Alexandre Hego; Justine Huart; Arnaud Joly; Pierre Geurts; Pierre Damas; Christelle Lecut; André Gothot; Cécile Oury

Platelets are now considered to be immune and inflammatory agents as well as key cells in coagulation, and as such have been implicated in the pathophysiology of sepsis [1]. Thrombocytopenia is associated with sepsis severity and poor prognosis, and hyperactivated platelets probably contribute to microvascular thrombosis and organ failure. In the present study, we evaluated platelet activation markers as potential predictive markers of sepsis and of mortality among four commonly encountered populations of patients admitted to ICUs.


Critical Care | 2015

Erratum: Prospective immune profiling in critically ill adults: before, during and after severe sepsis and septic shock.

Nathalie Layios; Christian Gosset; Céline Delierneux; Alexandre Hego; Justine Huart; Arnaud Joly; Pierre Geurts; Pierre Damas; Cécile Oury; André Gothot

Author details Department of General Intensive Care, University Hospital Centre of Liege, Domaine Sart-Tilman B35, Liege 4000, Belgium. GIGA-Cardiovascular Sciences, Laboratory of Thrombosis and Hemostasis, University of Liege, Domaine Sart-Tilman B35, 4000 Liege, Belgium. CHU de Liege, Domaine Sart-Tilman B35, 4000 Liege, Belgium. Laboratory Hematology, University Hospital Centre of Liege, Liege, Belgium. Systems and Modeling, Department of Electrical Engineering and Computer Science and GIGA-R, University of Liege, Domaine Sart-Tilman B35, 4000 Liege, Belgium. Reference 1. Layios N. Prospective immune profiling in critically ill adults: before, during and after severe sepsis and septic shock. Crit Care. 2015;19(Suppl 1):P43.


european conference on machine learning | 2013

API design for machine learning software: experiences from the scikit-learn project

Lars Buitinck; Gilles Louppe; Mathieu Blondel; Fabian Pedregosa; Andreas Mueller; Olivier Grisel; Vlad Niculae; Peter Prettenhofer; Alexandre Gramfort; Jaques Grobler; Robert Layton; Jake Vanderplas; Arnaud Joly; Brian Holt; Gaël Varoquaux


the european symposium on artificial neural networks | 2012

L1-based compression of random forest models

Arnaud Joly; François Schnitzler; Pierre Geurts; Louis Wehenkel


Intensive Care Medicine Experimental | 2017

Sepsis prediction in critically ill patients by platelet activation markers on ICU admission: a prospective pilot study

Nathalie Layios; Céline Delierneux; Alexandre Hego; Justine Huart; Christian Gosset; Christelle Lecut; Nathalie Maes; Pierre Geurts; Arnaud Joly; Patrizio Lancellotti; Adelin Albert; Pierre Damas; André Gothot; Cécile Oury


arXiv: Machine Learning | 2017

Exploiting random projections and sparsity with random forests and gradient boosting methods - Application to multi-label and multi-output learning, random forest model compression and leveraging input sparsity

Arnaud Joly


international conference on machine learning | 2017

Globally Induced Forest: A Prepruning Compression Scheme

Jean-Michel Begon; Arnaud Joly; Pierre Geurts


Archive | 2016

Joint learning and pruning of decision forests

Jean-Michel Begon; Arnaud Joly; Pierre Geurts

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