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Dive into the research topics where Atiye Seda Yar is active.

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Featured researches published by Atiye Seda Yar.


Genetics and Molecular Research | 2011

The effects of resveratrol on cyclooxygenase-1 and -2, nuclear factor kappa beta, matrix metalloproteinase-9, and sirtuin 1 mRNA expression in hearts of streptozotocin-induced diabetic rats.

Atiye Seda Yar; Sevda Menevse; Ebru Alp

Resveratrol (RSV) has a beneficial role in the prevention of diabetes and alleviates some diabetic complications, such as cardiomyopathy. We investigated cyclooxygenase-1 (COX-1), COX-2, nuclear factor κB (NF-κB), matrix metalloproteinase-9 (MMP-9), and sirtuin 1 (SIRT1) mRNA expression levels in heart tissue after RSV treatment in streptozotocin (STZ)-induced diabetic rats. After induction of chronic diabetes with STZ, 10 mg RSV/kg per day was administered to DM and DM+RSV groups for four weeks. At the end of the experiment, all rats were sacrificed and heart tissues were stored at -80°C; mRNA expression levels of COX-1, COX-2, NF-κB, MMP-9, and SIRT1 genes were analyzed with quantitative real-time PCR. We did not find any significant effect of RSV on MMP-9, COX-1, COX-2, or NF-κB mRNA levels among the groups. However, SIRT1 mRNA levels decreased in the DM group compared to controls and increased in the DM+RSV group when compared to the DM group. SIRT1 is activated by RSV treatment in diabetic heart tissue. Activation of SIRT1 by RSV may lead to a new therapeutic approach for diabetic heart tissue. We conclude that RSV treatment can alleviate heart dysfunction by inhibiton of inflammatory gene expression such as SIRT1.


Journal of Medicinal Food | 2012

Investigation of ocular neovascularization-related genes and oxidative stress in diabetic rat eye tissues after resveratrol treatment.

Atiye Seda Yar; Sevda Menevse; Irem Dogan; Ebru Alp; Volkan Ergin; Ahmet Cumaoglu; Aysel Aricioglu; Abdullah Ekmekci; Adnan Menevse

Changes in vascular endothelial growth factor (VEGF), angiotensin-converting enzyme (ACE), matrix metalloproteinase (MMP)-9, and endothelial nitric oxide synthase (eNOS) mRNA expression profiles and oxidative stress in the eye tissue microenviroment may have important roles in ocular neovascularization and permeability in proliferative diabetic retinopathy. The present study investigated the effects of resveratrol (RSV) treatment on the mRNA expression profile of VEGF, ACE, MMP-9, and eNOS, which are associated with vascular neovascularization, and glutathione, protein carbonyl, and nitrite-nitrate levels, which are markers of oxidative stress in eyes of diabetic rats. Twenty-four Wistar albino male rats were divided into four groups. After diabetes induction with streptozotocin (10 mg/kg/day) RSV was administered to the RSV and diabetes mellitus (DM) + RSV groups for 4 weeks. The mRNA levels were measured by quantitative real-time polymerase chain reaction assay, and biochemical estimations were determined with spectrophotometric assays in eye homogenates. The mRNA expression levels of VEGF, ACE, and MMP-9 were increased in the DM group compared with the control group, and RSV treatment decreased their mRNA levels. Expression of eNOS mRNA was increased in the RSV and DM groups and decreased in the DM + RSV group. Nitrite-nitrate levels and protein carbonyl content were increased and glutathione levels were decreased in the DM group compared with controls. Consequently, these data suggest that RSV suppressed the expression of eNOS, which is actively involved in the inflammation and healing process in chronic diabetes. Although oxidative stress was increased in eye tissue from diabetic rats, mRNA levels of VEGF, MMP-9, and ACE genes associated with vascular remodeling did not change in diabetic eyes.


Journal of Tissue Engineering and Regenerative Medicine | 2012

Auricular cartilage repair using cryogel scaffolds loaded with BMP‐7‐expressing primary chondrocytes

Sedat Odabas; Georg Feichtinger; Petek Korkusuz; Ilyas Inci; Elif Bilgiç; Atiye Seda Yar; Tarik Cavusoglu; Sevda Menevse; Ibrahim Vargel; Erhan Pişkin

The loss of cartilage tissue due to trauma, tumour surgery or congenital defects, such as microtia and anotia, is one of the major concerns in head and neck surgery. Recently tissue‐engineering approaches, including gene delivery, have been proposed for the regeneration of cartilage tissue. In this study, primary chondrocytes were genetically modified with plasmid‐encoding bone morphogenetic protein‐7 (BMP‐7) via the commercially available non‐viral Turbofect vector, with the aim of bringing ex vivo transfected chondrocytes to resynthesize BMP‐7 in vitro as they would in vivo. Genetically modified cells were implanted into gelatin–oxidized dextran scaffolds and cartilage tissue formation was investigated in 15 × 15 mm auricular cartilage defects in vivo in 48 New Zealand (NZ) white rabbits for 4 months. The results were evaluated via histology and early gene expression. Early gene expression results indicated a strong effect of exogenous BMP‐7 on matrix synthesis and chondrocyte growth. In addition, histological analysis results exhibited significantly better cartilage healing with BMP‐7‐modified (transfected) cells than in the non‐modified (non‐transfected) group and as well as the control. Copyright


Journal of Veterinary Science | 2014

Prostaglandin F receptor expression in intrauterine tissues of pregnant rats

Elvan Anadol; Halit Kanca; Atiye Seda Yar; Fatma Helvacioglu; Sevda Menevse; Engin Çalgüner; Deniz Erdogan

In this investigation, we studied the expression and localization of rat prostaglandin F (FP) receptor in uterine tissues of rats on gestational Days 10, 15, 18, 20, 21, 21.5 and postpartal Days 1 and 3 using Western blotting analysis, real-time PCR, and immunohistochemistry. A high level of immunoreactivity was observed on gestational Days 20, 21, and 21.5 with the most significant signals found on Day 20. FP receptor protein was expressed starting on gestational Day 15, and a fluctuating unsteady increase was observed until delivery. Uterine FP receptor mRNA levels were low between Days 10 and 18 of gestation (p < 0.05). The transcript level increased significantly on Day 20 and peaked on Day 21.5 just before labor (p < 0.05). There was a positive correlation between FP receptor mRNA expression and serum estradiol levels (rs = 0.78; p < 0.01) along with serum estradiol/progesterone ratios (rs = 0.79; p < 0.01). In summary, we observed an increase FP receptor expression in rat uterus with advancing gestation, a marked elevation of expression at term, and a concominant decrease during the postpartum period. These findings indicate a role for uterine FP receptors in the mediation of uterine contractility at term.


The Cleft Palate-Craniofacial Journal | 2016

Poly(L-Lactide)/Poly(ε-Caprolactone) and Collagen/β-Tricalcium Phosphate Scaffolds for the Treatment of Critical-Sized Rat Alveolar Defects: A Microtomographic, Molecular-Biological, and Histological Study.

Omer Ekin; Mert Calis; Ali Aliyev; Atiye Seda Yar; Petek Korkusuz; Elif Bilgiç; Halil Murat Aydin; Hakan Hamdi Çelik; Figen Özgür; Ibrahim Vargel

Objective To determine the efficacy of a newly developed scaffold (col/β-TCP) in a preclinical rat model as compared with the gold standard treatment (autograft) and control scaffolds (PLLA/PCL). Design Fifty-six Sprague-Dawley rats were randomized into four experimental groups, and critical-sized alveolar defects (7 × 4 × 3 mm) were created in each animal. Group A was the blank defect group, group B received autograft, group C received col/β-TCP scaffolds, and group D received PLLA/PCL blend scaffolds to fill the bone defects. New bone formation was assessed radiomorphometrically, histomorphometrically, and molecular-biologically at 1 and 4 months following surgery. Results Radiomorphometrically, the best new bone volume rate at 1 month (43.7%) and 4 months (45.4%) was observed in the autograft group, and the difference was significantly higher than in the other three groups (P ≤ .005, P ≤ .001, P ≤ .001 for 1 month and P = .004, P ≤ .001, P ≤ .001 for 4 months). Even though the new bone volume rate in the col/β-TCP group (21.5%) was higher than that of the PLLA/PCL group (18.2%), the difference was not significant (P = .08). Molecular-genetic analysis revealed significantly higher BSP and ALP gene expression levels in the autograft and col/β-TCP groups than in the blank defect group (P = .002 and P = .004). Conclusion The engineered tissue scaffolds described herein have great potential as an alternative treatment option when cost, donor region morbidity, and duration of hospitalization are considered.


Molecular Biology Reports | 2010

The effects of resveratrol on cyclooxygenase-1 and cyclooxygenase-2 mRNA and protein levels in diabetic rat kidneys

Atiye Seda Yar; Sevda Menevse; Ebru Alp; Fatma Helvacioglu; Gulnur Take


Turkish Journal of Biochemistry-turk Biyokimya Dergisi | 2013

The Effects of Topoisomerase Inhibition on Dna Repair and Apoptosis in L929 Fibroblasts

Irem Dogan; Atiye Seda Yar; Volkan Ergin; Sevda Menevse; Adnan Menevse; Abdullah Ekmekci


Archive | 2013

L929 Fibroblast Hücre Hattinda Topoizomeraz İnhibisyonunun DNA Onarimi ve Apoptozis Üzerine

Atiye Seda Yar; Volkan Ergin; Abdullah Ekmekci


Turkish Journal of Biochemistry-turk Biyokimya Dergisi | 2012

Association between TNF-β NcoI (A252G) gene polymorphism and type I diabetes mellitus in Turkish population

Ebru Alp; Atiye Seda Yar; Hassan Mohebbatikaljahi; Hüseyin Demirci; Ilhan Yetkin; Emine Sevda Menevse


Archive | 2012

Türk toplumunda TNF-β NcoI (A252G) gen polimorfizmi ile tip I diabetes mellitus arasindaki ilişki (Association between TNF-β NcoI (A252G) gene polymorphism and type I diabetes mellitus in Turkish population)

Ebru Alp; Atiye Seda Yar; Hassan Mohebbatikaljahi; Hüseyin Demirci; Emine Sevda

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