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Dive into the research topics where Ayca Kiykim is active.

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Featured researches published by Ayca Kiykim.


Allergy | 2014

Vitamin D as an adjunct to subcutaneous allergen immunotherapy in asthmatic children sensitized to house dust mite

Safa Barış; Ayca Kiykim; Ahmet Ozen; Aysin Tulunay; Elif Karakoc-Aydiner; Isil B. Barlan

We aimed to investigate the efficacy, safety, and T regulatory cell response of vitamin D as an adjunct to allergen‐specific immunotherapy (IT).


The New England Journal of Medicine | 2017

CD55 Deficiency, Early-Onset Protein-Losing Enteropathy, and Thrombosis

Ahmet Ozen; William A. Comrie; Rico Chandra Ardy; Cecilia Domínguez Conde; Buket Dalgic; Ömer Faruk Beşer; Aaron Morawski; Elif Karakoc-Aydiner; Engin Tutar; Safa Barış; Figen Ozcay; Nina Kathrin Serwas; Yu Zhang; Helen F. Matthews; Stefania Pittaluga; Les R. Folio; Aysel Ünlüsoy Aksu; Joshua McElwee; Ana Krolo; Ayca Kiykim; Zeren Baris; Meltem Gulsan; İsmail Öğülür; Scott B. Snapper; R. H. J. Houwen; Helen L. Leavis; Deniz Ertem; Renate Kain; Sinan Sari; Tülay Erkan

Background Studies of monogenic gastrointestinal diseases have revealed molecular pathways critical to gut homeostasis and enabled the development of targeted therapies. Methods We studied 11 patients with abdominal pain and diarrhea caused by early‐onset protein‐losing enteropathy with primary intestinal lymphangiectasia, edema due to hypoproteinemia, malabsorption, and less frequently, bowel inflammation, recurrent infections, and angiopathic thromboembolic disease; the disorder followed an autosomal recessive pattern of inheritance. Whole‐exome sequencing was performed to identify gene variants. We evaluated the function of CD55 in patients’ cells, which we confirmed by means of exogenous induction of expression of CD55. Results We identified homozygous loss‐of‐function mutations in the gene encoding CD55 (decay‐accelerating factor), which lead to loss of protein expression. Patients’ T lymphocytes showed increased complement activation causing surface deposition of complement and the generation of soluble C5a. Costimulatory function and cytokine modulation by CD55 were defective. Genetic reconstitution of CD55 or treatment with a complement‐inhibitory therapeutic antibody reversed abnormal complement activation. Conclusions CD55 deficiency with hyperactivation of complement, angiopathic thrombosis, and protein‐losing enteropathy (the CHAPLE syndrome) is caused by abnormal complement activation due to biallelic loss‐of‐function mutations in CD55. (Funded by the National Institute of Allergy and Infectious Diseases and others.)


Journal of Clinical Immunology | 2015

Potentially Beneficial Effect of Hydroxychloroquine in a Patient with a Novel Mutation in Protein Kinase Cδ Deficiency

Ayca Kiykim; İsmail Öğülür; Safa Barış; Elisabeth Salzer; Elif Karakoc-Aydiner; Ahmet Ozen; Wojciech Garncarz; Tatjana Hirschmugl; Ana Krolo; Ayse Deniz Yucelten; Kaan Boztug; Isil B. Barlan

Protein kinase C delta (PRKCD) has essential functions in controlling B-cell proliferation and apoptosis, development of B-cell tolerance and NK-cell cytolitic activity. Human PRKCD deficiency was recently identified to be causative for an autoimmune lymphoproliferative syndrome like disorder with significant B-cell proliferation particularly of immature B cells. Here we report a child with a novel mutation in PRKCD gene who presented with CMV infection and an early onset SLE-like disorder which was successfully treated with hydroxychloroquine.


The Journal of Allergy and Clinical Immunology | 2017

Exaggerated follicular helper T-cell responses in patients with LRBA deficiency caused by failure of CTLA4-mediated regulation

Fayhan Alroqi; Louis-Marie Charbonnier; Safa Barış; Ayca Kiykim; Janet Chou; Craig D. Platt; Abdulrahman Algassim; Sevgi Keles; Bandar K. Al Saud; Fowzan S. Alkuraya; Michael B. Jordan; Raif S. Geha; Talal A. Chatila

Background: LPS‐responsive beige‐like anchor protein (LRBA) and cytotoxic T lymphocyte–associated antigen 4 (CTLA4) deficiencies give rise to overlapping phenotypes of immune dysregulation and autoimmunity, with dramatically increased frequencies of circulating follicular helper T (cTFH) cells. Objective: We sought to determine the mechanisms of cTFH cell dysregulation in patients with LRBA deficiency and the utility of monitoring cTFH cells as a correlate of clinical response to CTLA4‐Ig therapy. Methods: cTFH cells and other lymphocyte subpopulations were characterized. Functional analyses included in vitro follicular helper T (TFH) cell differentiation and cTFH/naive B‐cell cocultures. Serum soluble IL‐2 receptor &agr; chain levels and in vitro immunoglobulin production by cultured B cells were quantified by using ELISA. Results: cTFH cell frequencies in patients with LRBA or CTLA4 deficiency sharply decreased with CTLA4‐Ig therapy in parallel with other markers of immune dysregulation, including soluble IL‐2 receptor &agr; chain, CD45RO+CD4+ effector T cells, and autoantibodies, and this was predictive of favorable clinical responses. cTFH cells in patients with LRBA deficiency were biased toward a TH1‐like cell phenotype, which was partially reversed by CTLA4‐Ig therapy. LRBA‐sufficient but not LRBA‐deficient regulatory T cells suppressed in vitro TFH cell differentiation in a CTLA4‐dependent manner. LRBA‐deficient TFH cells supported in vitro antibody production by naive LRBA‐sufficient B cells. Conclusions: cTFH cell dysregulation in patients with LRBA deficiency reflects impaired control of TFH cell differentiation because of profoundly decreased CTLA4 expression on regulatory T cells and probably contributes to autoimmunity in patients with this disease. Serial monitoring of cTFH cell frequencies is highly useful in gauging the clinical response of LRBA‐deficient patients to CTLA4‐Ig therapy.


Frontiers in Immunology | 2017

Patients with Primary Immunodeficiencies Are a Reservoir of Poliovirus and a Risk to Polio Eradication

Asghar Aghamohammadi; Hassan Abolhassani; Necil Kutukculer; Steve Wassilak; Mark A. Pallansch; Samantha Kluglein; Jessica Quinn; Roland W. Sutter; Xiaochuan Wang; Ozden Sanal; Tatiana Latysheva; Aydan Ikinciogullari; Ewa Bernatowska; Irina Tuzankina; Beatriz Tavares Costa-Carvalho; José Luis Franco; Raz Somech; Elif Karakoc-Aydiner; Surjit Singh; Liliana Bezrodnik; Francisco J. Espinosa-Rosales; Anna Shcherbina; Yu-Lung Lau; Shigeaki Nonoyama; Fred Modell; Vicki Modell; Mohamed-Ridha Barbouche; Mark A. McKinlay; Ahmet Ozen; Andrea Berlin

Immunodeficiency-associated vaccine-derived polioviruses (iVDPVs) have been isolated from primary immunodeficiency (PID) patients exposed to oral poliovirus vaccine (OPV). Patients may excrete poliovirus strains for months or years; the excreted viruses are frequently highly divergent from the parental OPV and have been shown to be as neurovirulent as wild virus. Thus, these patients represent a potential reservoir for transmission of neurovirulent polioviruses in the post-eradication era. In support of WHO recommendations to better estimate the prevalence of poliovirus excreters among PIDs and characterize genetic evolution of these strains, 635 patients including 570 with primary antibody deficiencies and 65 combined immunodeficiencies were studied from 13 OPV-using countries. Two stool samples were collected over 4 days, tested for enterovirus, and the poliovirus positive samples were sequenced. Thirteen patients (2%) excreted polioviruses, most for less than 2 months following identification of infection. Five (0.8%) were classified as iVDPVs (only in combined immunodeficiencies and mostly poliovirus serotype 2). Non-polio enteroviruses were detected in 30 patients (4.7%). Patients with combined immunodeficiencies had increased risk of delayed poliovirus clearance compared to primary antibody deficiencies. Usually, iVDPV was detected in subjects with combined immunodeficiencies in a short period of time after OPV exposure, most for less than 6 months. Surveillance for poliovirus excretion among PID patients should be reinforced until polio eradication is certified and the use of OPV is stopped. Survival rates among PID patients are improving in lower and middle income countries, and iVDPV excreters are identified more frequently. Antivirals or enhanced immunotherapies presently in development represent the only potential means to manage the treatment of prolonged excreters and the risk they present to the polio endgame.


Frontiers in Immunology | 2018

Disease Evolution and Response to Rapamycin in Activated Phosphoinositide 3-Kinase δ Syndrome: The European Society for Immunodeficiencies-Activated Phosphoinositide 3-Kinase δ Syndrome Registry

Maria Elena Maccari; Hassan Abolhassani; Asghar Aghamohammadi; Alessandro Aiuti; Olga Aleinikova; C. Bangs; Safa Barış; Federica Barzaghi; Helen Baxendale; Matthew Buckland; Siobhan O. Burns; Caterina Cancrini; Andrew J. Cant; Pascal Cathébras; Marina Cavazzana; Anita Chandra; Francesca Conti; Tanya Coulter; Lisa A. Devlin; J. David M. Edgar; Saul N. Faust; Alain Fischer; Marina Garcia Prat; Lennart Hammarström; Maximilian Heeg; Stephen Jolles; Elif Karakoc-Aydiner; Gerhard Kindle; Ayca Kiykim; Dinakantha Kumararatne

Activated phosphoinositide 3-kinase (PI3K) δ Syndrome (APDS), caused by autosomal dominant mutations in PIK3CD (APDS1) or PIK3R1 (APDS2), is a heterogeneous primary immunodeficiency. While initial cohort-descriptions summarized the spectrum of clinical and immunological manifestations, questions about long-term disease evolution and response to therapy remain. The prospective European Society for Immunodeficiencies (ESID)-APDS registry aims to characterize the disease course, identify outcome predictors, and evaluate treatment responses. So far, 77 patients have been recruited (51 APDS1, 26 APDS2). Analysis of disease evolution in the first 68 patients pinpoints the early occurrence of recurrent respiratory infections followed by chronic lymphoproliferation, gastrointestinal manifestations, and cytopenias. Although most manifestations occur by age 15, adult-onset and asymptomatic courses were documented. Bronchiectasis was observed in 24/40 APDS1 patients who received a CT-scan compared with 4/15 APDS2 patients. By age 20, half of the patients had received at least one immunosuppressant, but 2–3 lines of immunosuppressive therapy were not unusual before age 10. Response to rapamycin was rated by physician visual analog scale as good in 10, moderate in 9, and poor in 7. Lymphoproliferation showed the best response (8 complete, 11 partial, 6 no remission), while bowel inflammation (3 complete, 3 partial, 9 no remission) and cytopenia (3 complete, 2 partial, 9 no remission) responded less well. Hence, non-lymphoproliferative manifestations should be a key target for novel therapies. This report from the ESID-APDS registry provides comprehensive baseline documentation for a growing cohort that will be followed prospectively to establish prognostic factors and identify patients for treatment studies.


Journal of Pediatric Hematology Oncology | 2015

G6PC3 Deficiency: Primary Immune Deficiency Beyond Just Neutropenia.

Ayca Kiykim; Safa Barış; Elif Karakoc-Aydiner; Ahmet Ozen; İsmail Öğülür; Suheyla Bozkurt; Cigdem C. Ataizi; Kaan Boztug; Isil B. Barlan

Glucose-6-phosphatase catalytic subunit 3 (G6PC3) deficiency was recently defined as a new severe congenital neutropenia subgroup remarkable with congenital heart defects, urogenital malformations, endocrine abnormalities, and prominent superficial veins. Here, we report 3 patients with G6PC3 deficiency presenting with recurrent diarrhea, failure to thrive, and sinopulmonary infections leading to bronchiectasis. In patient I and II, a combined immune deficiency was suspected due to early-onset disease with lymphopenia, neutropenia, and thrombocytopenia, along with variable reductions in lymphocyte subpopulations and favorable response to intravenous γ-globulin therapy. Apart from neutropenia, all 3 patients had intermittent thrombocytopenia, anemia, and lymphopenia. All patients had failure to thrive and some of the classic syndromic features of G6PC3 deficiency, including cardiac abnormalities and visibility of superficial veins in all, endocrinologic problems in PI and PIII, and urogenital abnormalities in PII. Our experience suggests that a diagnosis of congenital neutropenia due to G6PC3 may not be as straightforward in such patients with combined lymphopenia and thrombocytopenia. A high index of suspicion and the other syndromic features of G6PC3 were clues to diagnosis. Screening of all combined immune deficiencies with neutropenia may help to uncover the whole spectra of G6PC3 deficiency.


Clinical Immunology | 2016

Novel CLPB mutation in a patient with 3-methylglutaconic aciduria causing severe neurological involvement and congenital neutropenia.

Ayca Kiykim; Wojciech Garncarz; Elif Karakoc-Aydiner; Ahmet Ozen; Ertugrul Kiykim; Gözde Yeşil; Kaan Boztug; Safa Barış

3-Methylglutaconic acid (3-MGA) is a branched-chain organic acid and derived from leucine catabolism. Abnormal metabolism in this pathway results in 3-MGA-uria which is associated with several mitochondrial disorders [1,2]. Nowadays, 5 types of the disease were described [2]. Recently, type VII of 3-MGA-uria was reported with cataracts, neurologic involvement, and neutropenia (MEGCANN) [3–5]. MEGCANN is an autosomal recessive metabolic disorder causing by CLPB gene encodes ClpB caseinolytic peptidase B homolog, amember of AAA+ proteins family containing ATP-binding sites [4,5]. Severe congenital neutropenia (SCN) exhibit a heterogeneous group of diseases causing early-onset life-threatening susceptibility to bacterial infections accompanied by lack of mature neutrophils [6]. Different studies have shown mutations in ELA2, HAX1, G6PC3, WAS, GFI1 and JAGN1 genes, which account for the different forms of hereditary SCN [6,7]. Some of the SCN types were associated with multisystemic involvement, which denotes as syndromic type like Hermansky-Pudlak syndrome type II (AP3B1) [8], Cohen syndrome (COH1) [9] and Barth syndrome — MGA-uria type II (TAZ) [10]. MEGCANN disorder affected 3-MGA metabolism was found to be related with syndromic neutropenia [3–5]. Here, we report a case with novel CLPB mutation displaying multiorgan involvement. A two-year old female was a product of healthy nonconsanguineous parents. She was admitted to our clinic at 5 months of age with fever and skin abscess localized on her chin. Severe persistent neutropenia (range: 0–400/mm) was detected with a compatible blood smear absent of granulocytes (Supplementary Table 1). Due to persistence of neutropenia bone marrow aspiration was performed and revealed normocellularity with a decrease in myeloid series and maturation arrest. G-CSFwas startedwith a favorable response, increasing neutrophil counts to 8000/mm. Although developmental milestones were appropriate at 5 months of age, she exhibited neuromotor deterioration and severe hypotonia during the follow-up (Fig. 1A-C). At 17 months of age, tonic seizures complicated with strabismus were developed. Intractable seizures were observed despite combined phenobarbital, levatiracetam, clobazam and vigabatrin therapies. Cranial magnetic resonance imaging (MRI) was strikingly showing cerebralcerebellar atrophy, bilaterally increased signaling at internal capsule


Journal of Clinical Immunology | 2015

JAGN1 Deficient Severe Congenital Neutropenia: Two Cases from the Same Family

Safa Barış; E. Karakoc–Aydiner; Ahmet Ozen; K. Delil; Ayca Kiykim; İsmail Öğülür; Ibrahim Baris; Isil B. Barlan

Recently autosomal recessively inherited mutations in the gene encoding Jagunal homolog 1 (JAGN1) was described as a novel disease-causing gene of severe congenital neutropenia (SCN) JAGN1-mutant neutrophils were characterized by abnormality in endoplasmic reticulum structure, absence of granules, abnormal N-glycosylation of proteins and susceptibility to apoptosis. These findings imply the role of JAGN1 in neutrophil survival. Here, we report two siblings with a homozygous mutation in JAGN1 gene, exhibiting multisystemic involvement.


The Journal of Allergy and Clinical Immunology | 2017

Long-term follow-up of IPEX syndrome patients after different therapeutic strategies: An international multicenter retrospective study

Federica Barzaghi; Laura Cristina Amaya Hernandez; Bénédicte Neven; Silvia Ricci; Zeynep Yesim Kucuk; Jack Bleesing; Zohreh Nademi; Mary Slatter; Erlinda Rose Ulloa; Anna Shcherbina; Anna Roppelt; Austen Worth; Juliana Silva; Alessandro Aiuti; Luis Murguia-Favela; Carsten Speckmann; Magda Carneiro-Sampaio; Juliana Folloni Fernandes; Safa Barış; Ahmet Ozen; Elif Karakoc-Aydiner; Ayca Kiykim; Ansgar Schulz; Sandra Steinmann; Lucia Dora Notarangelo; Eleonora Gambineri; Paolo Lionetti; William T. Shearer; Lisa R. Forbes; Caridad Martinez

Background: Immunodysregulation polyendocrinopathy enteropathy x‐linked (IPEX) syndrome is a monogenic autoimmune disease caused by FOXP3 mutations. Because it is a rare disease, the natural history and response to treatments, including allogeneic hematopoietic stem cell transplantation (HSCT) and immunosuppression (IS), have not been thoroughly examined. Objective: This analysis sought to evaluate disease onset, progression, and long‐term outcome of the 2 main treatments in long‐term IPEX survivors. Methods: Clinical histories of 96 patients with a genetically proven IPEX syndrome were collected from 38 institutions worldwide and retrospectively analyzed. To investigate possible factors suitable to predict the outcome, an organ involvement (OI) scoring system was developed. Results: We confirm neonatal onset with enteropathy, type 1 diabetes, and eczema. In addition, we found less common manifestations in delayed onset patients or during disease evolution. There is no correlation between the site of mutation and the disease course or outcome, and the same genotype can present with variable phenotypes. HSCT patients (n = 58) had a median follow‐up of 2.7 years (range, 1 week‐15 years). Patients receiving chronic IS (n = 34) had a median follow‐up of 4 years (range, 2 months‐25 years). The overall survival after HSCT was 73.2% (95% CI, 59.4–83.0) and after IS was 65.1% (95% CI, 62.8–95.8). The pretreatment OI score was the only significant predictor of overall survival after transplant (P = .035) but not under IS. Conclusions: Patients receiving chronic IS were hampered by disease recurrence or complications, impacting long‐term disease‐free survival. When performed in patients with a low OI score, HSCT resulted in disease resolution with better quality of life, independent of age, donor source, or conditioning regimen.

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Alessandro Aiuti

Vita-Salute San Raffaele University

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Federica Barzaghi

Vita-Salute San Raffaele University

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