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Featured researches published by B. Bapat.


European Urology Supplements | 2014

625 A non-invasive urine-based epigenetic urinary biomarker panel for the detection of bladder cancer and the discrimination of high-grade and low-grade disease

Thomas Hermanns; Ekaterina Olkhov-Mitsel; Andrea J. Savio; Bimal Bhindi; Darko Zdravic; C. Kuk; Aidan P. Noon; Ricardo Rendon; David Waltregny; Kirk C. Lo; T.H. van der Kwast; A. Finelli; Neil Fleshner; A.R. Zlotta; B. Bapat

1Princess Margaret Cancer Centre, Dept. of Surgical Oncology, Division of Urology, University of Toronto, Toronto, Canada, 2Mount Sinai Hospital, Samuel Lunenfeld Research Institute, Toronto, Canada, 3University Health Network, Dept. of Surgery, Division of Urology, University of Toronto, Toronto, Canada, 4Mount Sinai Hospital, Dept. of Surgery, Division of Urology, Toronto, Canada, 5Dalhousie University, Dept. of Urology, Halifax, Canada, 6University of Liege, Dept. of Urology, Liege, Belgium, 7University Health Network, Dept. of Pathology, University of Toronto, Toronto, Canada


Cancer Research | 2013

Abstract B21: Epigenetic and post-transcriptional regulation of the kallikrein gene family as a novel panel of prostate cancer biomarkers

Ekaterina Olkhov-Mitsel; Theodorus van der Kwast; Ken Kron; Hilmi Ozcelik; Laurent Briollais; Neil Fleshner; Eleftherios P. Diamandis; Alexandre Zlotta; B. Bapat

Prostate cancer (PCa), the most commonly diagnosed cancer in North American men, is currently detected using a serum test for prostate-specific antigen (PSA), a protein encoded by kallikrein 3 ( KLK3 ). However, PSA testing has limited sensitivity and specificity leading to over-diagnosis of PCa. Therefore, improved biomarkers are urgently needed to identify aggressive vs. indolent PCa. Other members of the 15-member KLK gene family, which encode for serine proteases, are likely candidates since their expression is altered in PCa. Emerging evidence has shown that epigenetic mechanisms such as DNA methylation and aberrant microRNA (miRNA) expression may regulate KLK expression in carcinogenesis. Importantly, these marks are potentially promising biomarkers since they can be detected in tissue and serum samples of PCa patients. Studies to date have not examined how DNA methylation and miRNA regulation mechanisms cooperate to influence KLK regulation. Using genome-wide CpG island DNA methylation profiling, we identified tumor-specific hypermethylation of KLK6 and KLK10 genes in PCa which we validated using methylation specific quantitative real-time PCR (MethyLight). We demonstrated that KLK10 DNA methylation was significantly associated with pathological stage and ERG oncogene expression status in 2 independent cohorts of PCa patients (Cohort I, n=150 and II, n=124, P-value =0.007, 0.031, P-value =0.001, P KLK10 DNA methylation was associated with biochemical recurrence in univariate and multivariate analyses (P-values=0.046, 0.028, respectively, HR=2.11, 95% CI: 1.10-4.02). A similar trend for KLK6 DNA methylation was observed. The results suggest that KLK6 and KLK10 DNA methylation distinguishes organ confined from locally invasive PCa and may have prognostic value. To better understand the regulation of this protease family and potentially PCa pathogenesis, we have performed in silico analysis to identify a panel of miRNAs implicated in KLK regulation. Notably, we found mir-137 was predicted to target KLK10 and was hypomethylated by genome-wide methylation array profiling. Among the 21 CpG island microarray probes representing the mir-137 genomic region, 3 were significantly differentially methylated in high grade vs. low grade PCas and 5 were significantly differentially methylated between ERG positive and negative cases (P-values -ΔCt method after normalization to U6 snRNA. The expression of mir-137 was 37% higher in PCa tissue vs. normal (P-value=0.28). Further, the proportion of cases with high mir-137 expression, based on a third quartile threshold, were significantly different between Gleason Score (GS) ≥8 vs. GS ≤7 and ERG positive vs. negative expression status (P-values=0.035, 0.013, respectively). These findings highlight the complexity of epigenetic regulatory systems and pave the way for further investigation of miRNA regulation of the KLK gene family. The association of KLK10 methylation and mir-137 profiles with ERG expression status further characterizes molecular subtypes of PCa, which will allow for potentially establishing a diagnostic and/or prognostic model of clinical significance for PCa. Citation Format: Ekaterina Olkhov-Mitsel, Theodorus Van der Kwast, Ken Kron, Hilmi Ozcelik, Laurent Briollais, Neil Fleshner, Eleftherios Diamandis, Alexandre Zlotta, Bharati Bapat. Epigenetic and post-transcriptional regulation of the kallikrein gene family as a novel panel of prostate cancer biomarkers. [abstract]. In: Proceedings of the AACR Special Conference on Chromatin and Epigenetics in Cancer; Jun 19-22, 2013; Atlanta, GA. Philadelphia (PA): AACR; Cancer Res 2013;73(13 Suppl):Abstract nr B21.


Tijdschrift voor Urologie | 2012

De FGFR3-mutatie identificeert patiënten met een relatief gunstige prognose na radicale cystectomie voor blaascarcinoom

B.W.G. van Rhijn; T.C.M. Zuiverloon; S. Shariat; C. Abbas; Peter J. Boström; E. Boevé; H. Roshani; C. Bangma; J. van der Hoeven; Eric H. Oomens; B. Bapat; Neil Fleshner; R. Ashfaq; A. Van Leenders; M.A.S. Jewett; Y. Lotan; A.R. Zlotta; T.H. Van Der Kwast; E.C. Zwarthoff

Introductie De selectie van patiënten met een laagrisicoprostaatcarcinoom (PCa) voor active surveillance (AS) is gebaseerd op klinisch stadium, PSA en TRUS-geleide biopsiecriteria. Grootste beperking van een dergelijke benadering is de potentiële onderschatting van de werkelijke gecombineerde gleasonscore en het pathologisch stadium. Doel van onze serie is te evalueren in hoeverre de pathologie bij radicale prostatectomie (RP) bij kandidaten voor AS overeenkomt met de preoperatieve klinische en pathologische stadiëring.


European Urology Supplements | 2011

765 THE FGFR3 MUTATION IDENTIFIES PATIENTS WITH FAVORABLE DISEASE AT RADICAL CYSTECTOMY FOR BLADDER CANCER

B. Van Rhijn; P.J. Bostrom; S.F. Shariat; A. Finelli; Arthur I. Sagalowsky; Neil Fleshner; B. Bapat; Hannes Kortekangas; Raheela Ashfaq; Tuomas Mirtti; M.A.S. Jewett; Yair Lotan; Th. H. van der Kwast; A.R. Zlotta


European Urology Supplements | 2017

Germline mutations in the Kallikrein 6 region and predisposition for aggressive prostate cancer

Laurent Briollais; Hilmi Ozcelik; Jingxiong Xu; Maciej Kwiatkowski; Emilie Lalonde; Dorota H Sendorek; Neil Fleshner; Franz Recker; C. Kuk; Ekaterina Olkhov-Mitsel; Sevtap Savas; S. Hanna; T. Juvet; Geoffrey A. M. Hunter; Matt Friedlander; Hong Li; Karen Chadwick; Ioannis Prassas; Antoninus Soosaipillai; Marco Randazzo; John Trachtenberg; Ants Toi; Yu-Jia Shiah; Michael Fraser; T.H. Van Der Kwast; Robert G. Bristow; B. Bapat; Eleftherios P. Diamandis; Paul C. Boutros; A.R. Zlotta


European Urology Supplements | 2015

755 A five-gene DNA-methylation biomarker panel sensitively detects bladder cancer and discriminates between high-grade and low-grade disease in voided urine

Thomas Hermanns; Ekaterina Olkhov-Mitsel; Andrea J. Savio; Bethany Gill; Jenna Sykes; Bimal Bhindi; T. Juvet; C. Kuk; Aidan P. Noon; Ricardo Rendon; David Waltregny; T.H. van der Kwast; A. Finelli; Neil Fleshner; Kirk C. Lo; B. Bapat; A.R. Zlotta


European Urology Supplements | 2015

423 Functional role of the kallikrein 6 region of the kallikrein locus in genetic predisposition for aggressive (Gleason ≥8) prostate cancer: Fine-mapping and methylation study in a Canadian cohort and the Swiss arm of the European Randomized Study for Prostate Cancer Screening

Laurent Briollais; Hilmi Ozcelik; Maciej Kwiatkowski; Jingxiong Xu; Sevtap Savas; E. Olkhov; Franz Recker; C. Kuk; S. Hanna; Neil Fleshner; T. Juvet; Matt Friedlander; Hong Li; Karen Chadwick; J. Trachtenberg; A. Toi; T.H. van der Kwast; Eleftherios P. Diamandis; B. Bapat; A.R. Zlotta


Progres En Urologie | 2014

Le Fibroblast Growth Factor Receptor 3 (FGFR3), cible thérapeutique pour le traitement personnalisé du cancer de la vessie : validation anatomo-pathologique du concept

Yann Neuzillet; Laura S. Mertens; Shahrokh F. Shariat; Peter J. Boström; Tuomas Mirtti; Arthur I. Sagalowsky; Raheela Ashfaq; Annegien Broeks; M. Van Der Heijden; Dennis Peters; C. Curial; J. De Jong; Simon Horenblas; Carolyn D. Hurst; Darren C. Tomlinson; Margaret A. Knowles; B. Bapat; M.A.S. Jewett; A.R. Zlotta; Joyce Sanders; Yair Lotan; T.H. Van Der Kwast; B. Van Rhijn


European Urology Supplements | 2014

412 Pathological validation of adjuvant anti-fibroblast growth factor receptor 3 (FGFR3) treatment for bladder cancer

Yann Neuzillet; Laura S. Mertens; S.F. Shariat; P.J. Bostrom; Tuomas Mirtti; Arthur I. Sagalowsky; Raheela Ashfaq; Annegien Broeks; S. Horenblas; Carolyn D. Hurst; Darren C. Tomlinson; Margaret A. Knowles; B. Bapat; M.A.S. Jewett; A.R. Zlotta; Joyce Sanders; Yair Lotan; T.H. van der Kwast; B. Van Rhijn


European Urology Supplements | 2014

206 Fine-mapping of the Kallikrein region and its role in prostate cancer aggressiveness: Results from a Canadian cohort and the European Randomized Study for Prostate Cancer Screening

Laurent Briollais; Jingxiong Xu; Maciej Kwiatkowski; Matt Friedlander; Franz Recker; C. Kuk; S. Hanna; Neil Fleshner; B. Bapat; T. Juvet; Hong Li; Karen Chadwick; J. Trachtenberg; Michael Nesbitt; T.H. van der Kwast; Eleftherios P. Diamandis; A.R. Zlotta; Hilmi Ozcelik

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A.R. Zlotta

University Health Network

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Neil Fleshner

Princess Margaret Cancer Centre

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M.A.S. Jewett

University Health Network

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B. Van Rhijn

Netherlands Cancer Institute

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T.H. van der Kwast

Erasmus University Rotterdam

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C. Kuk

Princess Margaret Cancer Centre

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