Barbara A. Wilson

Phytophthora cinnamomi and Australia's biodiversity : impacts, predictions and progress towards control

Phytophthora cinnamomi continues to cause devastating disease in Australian native vegetation and consequently the disease is listed by the Federal Government as a process that is threatening Australia’s biodiversity. Although several advances have been made in our understanding of how this soil-borne pathogen interacts with plants and of how we may tackle it in natural systems, our ability to control the disease is limited. The pathogen occurs widely across Australia but the severity of its impact is most evident within ecological communities of the south-west and south-east of the country. A regional impact summary for all states and territories shows the pathogen to be the cause of serious disease in numerous species, a significant number of which are rare and threatened. Many genera of endemic taxa have a high proportion of susceptible species including the iconic genera Banksia, Epacris and Xanthorrhoea. Long-term studies in Victoria have shown limited but probably unsustainable recovery of susceptible vegetation, given current management practices. Management of the disease in conservation reserves is reliant on hygiene, the use of chemicals and restriction of access, and has had only limited effectiveness and not provided complete control. The deleterious impacts of the disease on faunal habitat are reasonably well documented and demonstrate loss of individual animal species and changes in population structure and species abundance. Few plant species are known to be resistant to P. cinnamomi; however, investigations over several years have discovered the mechanisms by which some plants are able to survive infection, including the activation of defence-related genes and signalling pathways, the reinforcement of cell walls and accumulation of toxic metabolites. Manipulation of resistance and resistance-related mechanisms may provide avenues for protection against disease in otherwise susceptible species. Despite the advances made in Phytophthora research in Australia during the past 40 years, there is still much to be done to give land managers the resources to combat this disease. Recent State and Federal initiatives offer the prospect of a growing and broader awareness of the disease and its associated impacts. However, awareness must be translated into action as time is running out for the large number of susceptible, and potentially susceptible, species within vulnerable Australian ecological communities.

Modelling habitat suitability of the swamp antechinus (Antechinus minimus maritimus) in the coastal heathlands of southern Victoria, Australia

Abstract In recent years, predictive habitat distribution models, derived by combining multivariate statistical analyses with Geographic Information System (GIS) technology, have been recognised for their utility in conservation planning. The size and spatial arrangement of suitable habitat can influence the long-term persistence of some faunal species. In southwestern Victoria, Australia, populations of the rare swamp antechinus (Antechinus minimus maritimus) are threatened by further fragmentation of suitable habitat. In the current study, a spatially explicit habitat suitability model was developed for A. minimus that incorporated a measure of vegetation structure. Models were generated using logistic regression with species presence or absence as the dependent variable and landscape variables, extracted from both GIS data layers and multi-spectral digital imagery, as the predictors. The most parsimonious model, based on the Akaike Information Criterion, was spatially extrapolated in the GIS. Probability of species presence was used as an index of habitat suitability. A negative association between A. minimus presence and both elevation and habitat complexity was evidenced, suggesting a preference for relatively low altitudes and a vegetation structure of low vertical complexity. The predictive performance of the selected model was shown to be high (91%), indicating a good fit of the model to the data. The proportion of the study area predicted as suitable habitat for A. minimus (Probability of occurrence ⩾0.5) was 11.7%. Habitat suitability maps not only provide baseline information about the spatial arrangement of potentially suitable habitat for a species, but they also help to refine the search for other populations, making them an important conservation tool.

Effects of fragmented habitat and fire on the distribution and ecology of the swamp antechinus (Antechinus minimus maritimus) in the Eastern Otways, Victoria

This study investigated the distribution, habitat and population dynamics of the swamp antechinus (Antechinus minimus maritimus) in the eastern Otway Ranges. The species has a restricted, disjunct distribution and has been recorded at 25 sites between 1969 and 1999. All sites were located within 7 km of the coast, occurred at altitudes up to 80 m above sea level and within 10 m of a gully. Analysis of landscape site variables identified sun index as being significant in determination of the probability of occurrence of A. minimus. The presence of A. minimus is negatively associated with sun index, occuring at sites that have a southerly aspect and gentle slope. A. minimus was located in a range of structural vegetation including Open Forest, Low Woodland, Shrubland and Hummock Grassland and a number of floristic groups, some characterised by high frequencies of sclerophyll shrubs, others by high frequencies of Pteridium esculentum, hummock grasses and herbaceous species. A. minimus occurs in fragmented, small populations with maximum population densities of 1.1–18 ha–1. Populations at inland sites became extinct after the 1983 wildfire which burnt 41 000 ha. These sites have not been recolonised since, while on the coast the species did not re-establish until 1993–97. One population that is restricted to a narrow coastal strip of habitat is characterised by high levels of transient animals. The species is subject to extinction in the region due to habitat fragmentation, coastal developments and fire. Management actions to secure the present populations and ensure long-term survival of the species in the area are required and include implementation of appropriate fire regimes, prevention of habitat fragmentation, revegetation of habitat, and establishment of corridor habitat.

The use of potassium phosphonate to control Phytophthora cinnamomi in native vegetation at Anglesea, Victoria

Field and laboratory experiments were used to determine the effectiveness of potassium phosphonate for control of Phytophthora cinnamomi in native plants. Potassium phosphonate (from phosphonic acid neutralised with potassium hydroxide) was hand-sprayed on native vegetation in field sites at Anglesea, Victoria. Potassium phosphonate concentrations of 6 g a.i./L controlled disease progress in plants of Xanthorrhoea australis that exhibited the initial decline stages of infection. Plants that showed severe disease symptoms including brown foliage died irrespective of potassium phosphonate treatment. Phytotoxicity occurred in 9 out of 36 plant species at a concentration of 6 g a.i./L potassium phosphonate. Species most severely affected by potassium phosphonate were Banksia marginata and Eucalyptus willisii. Closed environment experiments on four species showed phytotoxicity to seedlings of E. willisii and Leptospermum myrsinoides. Laboratory analyses of isolates of P cinnamomi from the field sites showed inhibition of hyphal growth at potassium phosphonate concentrations ≥1 g a.i./L. When used at appropriate concentrations, potassium phosphonate has potential to control P cinnamomi in the types of heathland and forest communities studied.

Burning in Banksia Woodlands How does the Fire-Free period influence reptile communities?

Fire is an important management tool for both hazard reduction burning and maintenance of biodiversity. The impact of time since last fire on fauna is an important factor to understand as land managers often aim for prescribed burning regimes with specific fire-free intervals. However, our current understanding of the impact of time since last fire on fauna is largely unknown and likely dependent on vegetation type. We examined the responses of reptiles to fire age in banksia woodlands, and the interspersed melaleuca damplands among them, north of Perth, Western Australia, where the current prescribed burning regime is targeting a fire-free period of 8–12 years. The response of reptiles to fire was dependent on vegetation type. Reptiles were generally more abundant (e.g. Lerista elegans and Ctenophorus adelaidensis) and specious in banksia sites. Several species (e.g. Menetia greyii, Cryptoblepharus buchananii) preferred long unburnt melaleuca sites (>16 years since last fire, YSLF) compared to recently burnt sites (<12 YSLF). Several of the small elapids (e.g. the WA priority listed species Neelaps calonotus) were only detected in older-aged banksia sites (>16 YSLF). The terrestrial dragon C. adelaidensis and the skink Morethia obscura displayed a strong response to fire in banksia woodlands only. Highest abundances of the dragon were detected in the recently burnt (<7 YSLF) and long unburnt (>35 YSLF) banksia woodlands, while the skink was more abundant in older sites. Habitats from a range of fire ages are required to support the reptiles we detected, especially the longer unburnt (>16 YSLF) melaleuca habitat. Current burning prescriptions are reducing the availability of these older habitats.

Potassium phosphonate alters the defence response of Xanthorrhoea australis following infection by Phytophthora cinnamomi

Potassium phosphonate (phosphite) is widely used in the management of Phytophthora diseases in agriculture, horticulture and natural environments. The Austral grass tree, Xanthorrhoea australis, a keystone species in the dry sclerophyll forests of southern Australia, is susceptible to Phytophthora cinnamomi, but is protected by applications of phosphite. We examined the effect of phosphite application on the infection of X. australis seedlings and cell suspension cultures by zoospores of P. cinnamomi. Phosphite induced more intense cellular responses to pathogen challenge and suppressed pathogen ingress in both seedlings and cell cultures. In untreated X. australis seedlings, hyphal growth was initially intercellular, became intracellular 24h after inoculation, and by 48h had progressed into the vascular tissue. In phosphite-treated seedlings, growth of P. cinnamomi remained intercellular and was limited to the cortex, even at 72 h after inoculation. The cell membrane retracted from the cell wall and phenolic compounds and electron dense substances were deposited around the wall of infected and neighbouring cells. Suspension cells were infected within 6 h of inoculation. Within 24 h of inoculation, untreated cells were fully colonised, had collapsed cytoplasm and died. The protoplast of phosphite-treated suspension cells collapsed within 12 h of inoculation, and phenolic material accumulated in adjacent, uninfected cells. No anatomical response to phosphite treatment was observed before infection of plant tissues, suggesting that the phosphite-associated host defence response is induced following pathogen challenge. Anatomical changes provide evidence that phosphite stimulates the host defence system to respond more effectively to pathogen invasion.

Floristic and structural characteristics of a coastal heathland exhibiting symptoms of Phytophthora cinnamomi infestation in the eastern Otway Ranges, Victoria

The floristics and structure of heathland vegetation exhibiting symptoms of Phytophthora cinnamomi Rands infestation was assessed at two sites in heathlands at Anglesea, Victoria. There were significant effects in both floristics and structure. Thirteen heathland species were significantly less abundant in diseased areas and 23 species were more abundant. Diseased (infested) vegetation, when compared with non-diseased areas, had less cover of Xanthorrhoea australis and shrub species and a greater cover of sedges, grasses and open ground. Structural differences were observed between heights 0 and 0.6 m, with a decline in cover recorded in diseased vegetation. Non-metric multidimensional scaling ordination of the floristic data showed a clear separation of diseased and non-diseased vegetation and that changes in floristic composition post-infestation were similar at both sites. Although there was some evidence of regeneration of X. australis, the recovery capacity of other susceptible species at Anglesea is unknown. The long-term consequences of loss of species and structure in the eastern Otways mean that the vegetation is unlikely to return to former status, especially if the pathogen continues to reinfect.

Habitat utilisation by small mammals in a coastal heathland exhibiting symptoms of Phytophthora cinnamomi infestation

Phytophthora cinnamomi is a soil-inhabiting ‘water mould’ that is pathogenic to many native plant species in Australia, and has been shown to alter plant species abundance and richness, as well as the structure of vegetation in sclerophyllous vegetation. This study investigated the effects of P. cinnamomi-induced vegetation disturbance and habitat degradation on microhabitat associations of small mammals in a coastal heathland in southern Australia. Seven small mammal species were trapped in a P. cinnamomi-infested heathland community over four years. Trap stations were classified into three disease classes (non-diseased, active disease and post-disease) and structural and floristic aspects of the vegetation were recorded at each station. The mean number of species captured was greatest in non-diseased areas and least in post-disease areas. The total capture frequency of small mammals was lower in post-disease areas except where they were covered by thick stands of tall tea-tree (Leptospermum sp.). Combined small mammal captures were associated with thick vegetation and floristic factors. Captures of Antechinus agilis, Rattus fuscipes, Rattus lutreolus and Sminthopsis leucopus were greatest in non-diseased vegetation and were less frequent in areas of diseased vegetation. A. agilis and R. fuscipes captures were correlated with a floristic factor associated with non-diseased vegetation, while R. lutreolus was associated with structural factors, preferring thick vegetation. The impact on Cercartetus nanus and Isoodon obesulus could not be assessed owing to low captures of these species. Modification of vegetation structure and floristics associated with P. cinnamomi infestation is having a significant impact on the habitat utilised by the small mammal communities in the area. This impact highlights the need to identify and protect those areas that remain free of P. cinnamomi infestation. Continued spread of the pathogen will reduce the area of suitable small-mammal habitat able to support the diverse communities of the eastern Otway Ranges, Victoria, Australia.

Dispersal and the influence of rainfall on a population of the carnivorous marsupial swamp antechinus (Antechinus minimus maritimus)

Although there is evidence that recent climatic changes have had significant impacts on a wide range of species in the Northern Hemisphere, the influence of climate change, particularly drought, on Australian native small mammal species is poorly understood. In this study we investigated dispersal patterns and the influence of rainfall on the swamp antechinus (Antechinus minimus maritimus). Peak abundance occurred after the highest total annual rainfall for two decades, in 2001. A year later the population had declined to 10% of the peak. Birth dates appeared to occur three weeks earlier following a year of high rainfall. The dispersal of nine litters of pouch young (n = 62) was assessed following two breeding seasons. Young males remained on the natal site until December-January and dispersed before the breeding season. New males entered the population between January and June. More than 50% of females were residents and remained on the site to breed; the remaining females were trapped only once. After the male die-off the movements of pregnant females increased and they appeared to expand their home ranges. A. minimus exhibits philopatry of females and dispersal of males, as observed in other Antechinus species but dispersal occurs 2-3 months after weaning. This contrasts with juveniles of other Antechinus species that disperse abruptly after weaning. This study provides evidence that precipitation does have a major effect on the abundance of dasyurid species, making them vulnerable to drought and local or regional extinctions, particularly in areas of fragmented habitat and drying climates.

Factors influencing population dynamics in island and mainland populations of the swamp antechinus (Antechinus minimus)

Simultaneously analysing demographic processes of small mammals living in different ecological contexts may help to understand mechanisms that influence the growth and decline of these populations. The size and demography of swamp antechinus (Antechinus minimus) populations located in a coastal mainland habitat and on a small offshore island in south-eastern Australia were investigated. Large demographic differences occurred between the two ecosystems, with the island population density often 100 times greater than that on the mainland. The swamp antechinus in the mainland habitat was influenced by extrinsic climatic forces, with juvenile recruitment, individual body mass and overall population size being affected by rainfall, a factor likely to influence food availability for the species. However, the island population did not appear to be affected by drought to the same degree where allochthonous marine nutrient inputs may have offset any drought-induced reduction in primary production. Significantly greater juvenile recruitment in the island habitats combined with restricted emigration and potentially reduced predation and interspecific competition are likely to be responsible for the high population densities on the island. Although island populations appear robust, future conservation efforts should focus on mainland populations given the genetic deficiencies in the island populations.