Beatriz Ortiz-Santana

A phylogenetic overview of the antrodia clade (Basidiomycota, Polyporales)

Phylogenetic relationships among members of the antrodia clade were investigated with molecular data from two nuclear ribosomal DNA regions, LSU and ITS. A total of 123 species representing 26 genera producing a brown rot were included in the present study. Three DNA datasets (combined LSU-ITS dataset, LSU dataset, ITS dataset) comprising sequences of 449 isolates were evaluated with three different phylogenetic analyses (maximum likelihood, maximum parsimony, Bayesian inference). We present a phylogenetic overview of the five main groups recovered: the fibroporia, laetiporus, postia, laricifomes and core antrodia groups. Not all of the main groups received strong support in the analyses, requiring further research. We were able to identify a number of well supported clades within the main groups.

Molecular phylogeny, morphology, pigment chemistry and ecology in Hygrophoraceae (Agaricales)

Molecular phylogenies using 1–4 gene regions and information on ecology, morphology and pigment chemistry were used in a partial revision of the agaric family Hygro- phoraceae. The phylogenetically supported genera we recognize here in the Hygrophoraceae based on these and previous analyses are: Acantholichen, Ampulloclitocybe, Arrhenia, Cantharellula, Cantharocybe, Chromosera, Chrysomphalina, Cora, Corella, Cuphophyllus, Cyphellostereum, Dictyonema, Eonema, Gliophorus, Haasiella, Humidicutis, Hygroaster, Hygrocybe, Hygrophorus, Lichenomphalia, Neohygrocybe, Porpolomopsis and Pseudoarmillariella. A new genus that is sister to Chromosera is described as Gloioxanthomyces. Revisions were made at the ranks of subfamily, tribe, genus, subgenus, section and subsection. We present three new subfamilies, eight tribes (five new), eight subgenera (one new, one new combination and one stat. nov.), 26 sections (five new and three new combinations and two stat. nov.) and 14 subsections (two new, two stat. nov.). Species of Chromosera, Gliophorus, Humidicutis, and Neohygrocybe are often treated within the genus Hygrocybe; we therefore provide valid names in both classification systems. We used a minimalist approach in transferring genera and creating new names and combinations. Consequently, we retain in the Hygrophoraceae the basal cuphophylloid grade comprising the genera Cuphophyllus, Ampulloclitocybe and Cantharocybe, despite weak phylogenetic support. We include Aeruginospora and Semiomphalina in Hygrophoraceae based on morphology though molecular data are lacking. The lower hygrophoroid clade is basal to Hygrophoraceae s.s., comprising the genera Aphroditeola, Macrotyphula, Phyllotopsis, Pleurocybella, Sarcomyxa, Tricholomopsis and Typhula.

Molecular phylogeny and taxonomy of the genus Veloporphyrellus

Veloporphyrellus is a genus known from North and Central America, southeastern Asia, and Africa. Because species of this genus are phenotypically similar to some taxa in several genera, such as Boletellus, Leccinum, Strobilomyces, Suillus and Tylopilus s.l. belonging to Boletales, its phylogenetic disposition has never been addressed. We analyzed four DNA regions, the nuclear ribosomal LSU and tef-1α, and the mitochondrial mtSSU and atp6 genes, to investigate the phylogenetic disposition of Veloporphyrellus. Although the monophyly of the genus and its systematic placement within the Boletaceae was well supported, its relationship to other genera was not resolved. Morphologically Veloporphyrellus is distinguished from other boletoid genera by the combination of the pinkish or grayish pink hymenophore, the membranous veil hanging on the pilea margin, the trichoderm-like pileus covering and the smooth basidiospores. Five species, including two new species and two new combinations, are described and illustrated. A key to the species of Veloporphyrellus also is provided.

Armillaria altimontana, a new species from the western interior of North America

Armillaria altimontana, previously considered North American biological species (NABS) X, is described as new. To date, it appears that A. altimontana prefers higher-elevation, mesic sites within the dry, conifer forest zone of western interior North America. This species has been found on hardwoods and conifers and is associated most commonly with Abies-dominated forest types in southern British Columbia, Washington, Oregon, Idaho and northern California. Partial elongation factor 1-alpha (tef1) sequences were generated from six isolates of A. altimontana originating from three locations in northern Idaho. Phylogenetic analyses of all 10 North American Armillaria species were carried out with maximum parsimony and maximum likelihood. Results indicate that isolates of A. altimontana formed a monophyletic group and clustered with A. calvescens, A. cepistipes, A. gallica and A. nabsnona, which is in agreement with recent phylogenetic studies of Armillaria.

A revision of Boletellus sect. Ixocephali

Taxa included in Boletellus section Ixocephali sensu Singer are re-evaluated and species limits are clarified in a morphological context. In this revision, we recognize four distinct morphological species: B. jalapensis, B. elatus, B. longicollis, and B. singerii. Among these, we have ascertained that the concept of B. jalapensis was broadened to include another taxon (B. singerii) that was eventually recognized as distinct. Details of spore morphology that include size and shape also show that the precise longitudinal alignment and apical fusion or non-fusion of the costate ornamentation distinguishes two species pairs. These pairs occur on either side of the Pacific basin and include one velate and one non-velate species each: B. longicollis, B. elatus (E Asia) and B. jalapensis, B. singerii (America). Now that discrete morphological entities are clarified and recognizable, phylogenetic hypotheses can be attempted to test these concepts and perhaps infer the monophyly of section Ixocephali when appropriate sequence data are available from newly collected, properly vouchered and viable specimens.

A new species of Leccinum (Basidiomycota, Boletales) from Belize

Leccinum viscosum is described, illustrated, and compared with similar taxa. Morphological characters indicate that this taxon represents a new species.

A global view of Gyroporus: molecular phylogenetics, diversity patterns, and new species

ABSTRACT Gyroporus (Gyroporaceae, Boletales) is a highly diverse genus of poroid ectomycorrhizal mushrooms with a nearly worldwide distribution. Previous attempts to unravel the diversity within this genus proved difficult due to the presence of semicryptic species and ambiguous results from analysis of ribosomal RNA markers. In this study, we employ a combined morphotaxonomic and phylogenetic approach to delimit species and elucidate geographic and evolutionary patterns in Gyroporus. For phylogenetic analyses, the protein-coding genes atp6 (mitochondrial adenosine triphosphate [ATP] synthase subunit 6) and rpb2 (nuclear second largest subunit of RNA polymerase II) were selected based on their utility in studies of Boletales. We infer several distinct clades, most notably one corresponding to G. castaneus as a speciose Northern Hemisphere group, another unifying G. cyanescens and like entities, and a third group unifying G. longicystidiatus and a New World sister species. Also notable is the recovery of a sister relationship between the cyanescens and longicystidiatus clades. We formally describe five new species of Gyroporus, outline a number of provisional species, and briefly discuss distributional patterns. This study provides an important scaffold for future work on this well-known but poorly understood genus of fungi.

A Contribution to the Taxonomy of Rhizochaete (Polyporales, Basidiomycota)

Abstract Rhizochaete is a small genus of crust fungi that is closely related to Phanerochaete. A new species Rhizochaete belizensis is described, and three new combinations are proposed. Morphological studies and molecular sequence data from two nuclear ribosomal DNA regions (ITS and LSU) support the recognition of R. belizensis which is closely related to R. radicata. Analyses of sequence data also support the transfer of Phanerochaete flava to Rhizochaete. Phanerochaete percitrina from Cameroon and Peniophora rhizomorpho-sulphurea from India are transferred to Rhizochaete based on morphological studies of type specimens. Phanerochaete rubescens from Taiwan is placed in synonymy under R. borneensis. In addition, Phanerochaete mauiensis is redescribed and illustrated. A key to 13 accepted species of Rhizochaete and three morphologically similar species is presented.