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Dive into the research topics where Berkin Toker is active.

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Featured researches published by Berkin Toker.


Nature Genetics | 2011

Somatic mosaic IDH1 and IDH2 mutations are associated with enchondroma and spindle cell hemangioma in Ollier disease and Maffucci syndrome

Twinkal C. Pansuriya; Ronald van Eijk; Pio D'Adamo; Maayke A.J.H. van Ruler; Marieke L. Kuijjer; Jan Oosting; Anne-Marie Cleton-Jansen; Jolieke G. van Oosterwijk; Sofie L. J. Verbeke; Danielle Meijer; Tom van Wezel; Karolin Hansén Nord; Luca Sangiorgi; Berkin Toker; Bernadette Liegl-Atzwanger; Mikel San-Julian; Raf Sciot; Nisha Limaye; Lars-Gunnar Kindblom; Soeren Daugaard; Catherine Godfraind; Laurence M. Boon; Miikka Vikkula; Kyle C. Kurek; Karoly Szuhai; Pim J. French; Judith V. M. G. Bovée

Ollier disease and Maffucci syndrome are non-hereditary skeletal disorders characterized by multiple enchondromas (Ollier disease) combined with spindle cell hemangiomas (Maffucci syndrome). We report somatic heterozygous mutations in IDH1 (c.394C>T encoding an R132C substitution and c.395G>A encoding an R132H substitution) or IDH2 (c.516G>C encoding R172S) in 87% of enchondromas (benign cartilage tumors) and in 70% of spindle cell hemangiomas (benign vascular lesions). In total, 35 of 43 (81%) subjects with Ollier disease and 10 of 13 (77%) with Maffucci syndrome carried IDH1 (98%) or IDH2 (2%) mutations in their tumors. Fourteen of 16 subjects had identical mutations in separate lesions. Immunohistochemistry to detect mutant IDH1 R132H protein suggested intraneoplastic and somatic mosaicism. IDH1 mutations in cartilage tumors were associated with hypermethylation and downregulated expression of several genes. Mutations were also found in 40% of solitary central cartilaginous tumors and in four chondrosarcoma cell lines, which will enable functional studies to assess the role of IDH1 and IDH2 mutations in tumor formation.


Acta Orthopaedica et Traumatologica Turcica | 2009

Applications of external fixation for management of complications associated with musculoskeletal tumors and related surgery

Levent Eralp; Berkin Toker; Turgut Akgül; Harzem Ozger; Mehmet Kocaoglu; Sikander Hayat

OBJECTIVES We evaluated the results of, and the course of treatment with, external fixation (EF) in treating complications associated with bone tumors and related surgery. METHODS Eighteen patients (9 males, 9 females; mean age 19 years; range 6 to 35 years) who were treated with EF were evaluated in three groups. Histologic diagnoses were osteosarcoma (n=3), Ewings sarcoma (n=3), hereditary multiple exostosis (n=3), chondrosarcoma (n=2), synovial sarcoma (n=2), Olliers disease, giant cell tumor of bone, desmoid fibroma, chondromyxoid fibroma, and enchondroma. Complications secondary to bone tumors (n=4) and occurring following limb salvage surgery (n=14) were treated with Ilizarov circular EF in nine patients, unilateral EF in six patients, and both in three patients. RESULTS The first group included eight patients who were treated with EF for infection and nonunion or deformity following surgery. The mean shortening was 10.6 cm, the mean lengthening was 9.7 cm, and the mean external fixator index was 48.8 days/cm. One patient developed fracture of the free vascularized fibula graft after EF removal, and amputation was required in two patients. The second group consisted of six patients who had shortening secondary to tumor surgery. The mean shortening was 7.5 cm, the mean lengthening was 6.5 cm, and the mean external fixator index was 28 days/cm. In this group, the major complications were implant failure and knee stiffness. The third group included four patients with deformity and shortening secondary to multiple exostosis (n=3) and Olliers disease. The mean shortening was 7.5 cm, the mean lengthening was 6.5 cm, and the mean external fixator index was 57.2 days/cm. One patient developed ulnar shortening of 2 cm after growth. CONCLUSION The use of EF in the management of complications associated with bone tumors and related surgery yields successful results especially in young patients.


Acta Orthopaedica et Traumatologica Turcica | 2004

Evaluation of prognostic factors affecting recurrences and disease-free survival in extra-abdominal desmoid tumors

Harzem Ozger; Levent Eralp; Berkin Toker; Fulya Yaman Agaoglu; Yavuz Dizdar


Acta Orthopaedica et Traumatologica Turcica | 2007

Survival analysis and the effects of prognostic factors in patients treated for osteosarcoma

Harzem Ozger; Levent Eralp; Ata Can Atalar; Berkin Toker; Inci Ayan; Rejin Kebudi; Sevil Bagbek; Mert Basaran; Fulya Yaman Agaoglu; Yavuz Dizdar; Bilge Bilgic


Acta Orthopaedica Belgica | 2010

A review of problems, obstacles and sequelae encountered during femoral lengthening : uniplanar versus circular external fixator.

Levent Eralp; Mehmet Kocaoglu; Fikri Erkal Bilen; Halil Ibrahim Balci; Berkin Toker; Kamran Ahmad


Archives of Orthopaedic and Trauma Surgery | 2011

Comparison of fixator-assisted nailing versus circular external fixator for bone realignment of lower extremity angular deformities in rickets disease

Levent Eralp; Mehmet Kocaoglu; Berkin Toker; Halil Ibrahim Balci; Ahmed Awad


Archive | 2009

Applications of external fixation for management of complications associated with musculoskeletal tumors and related surgery Kas-iskelet sistemi tümörlerinin ve cerrahi tedavi komplikasyonlarinin tedavisinde eksternal fiksatör uygulamalari

Levent Eralp; Berkin Toker; Turgut Akgül; Harzem Ozger; Mehmet Kocaoglu; Sikander Hayat


Archive | 2009

The effect of resistance-related proteins on the prognosis and survival of patients with osteosarcoma: an immunohistochemical analysis Osteosarkomlu hastalarda dirençle ilişkili proteinlerin prognoz ve sağkalim üzerine etkisi: İmmünhistokimyasal analiz

Harzem Ozger; Levent Eralp; Ata Can Atalar; Berkin Toker; Lora Esberk Ates; Mustafa Sungur; Bilge Bilgic; Inci Ayan


Archive | 2009

Kas-iskelet sistemi tümörlerinin ve cerrahi tedavi komplikasyonlarinin tedavisinde eksternal fiksatör uygulamalari Applications of external fixation for management of complications associated with musculoskeletal tumors and related surgery

Levent Eralp; Berkin Toker; Turgut Akgül; Harzem Ozger; Sikander Hayat


Archive | 2007

Survival analysis and the effects of prognostic factors in patients treated for osteosarcoma Osteosarkom nedeniyle tedavi edilen hastalarda sağkalim analizi ve prognostik faktörlerin etkileri

Harzem Ozger; Levent Eralp; Ata Can Atalar; Berkin Toker; Inci Ayan; Rejin Kebudi; Sevil Bagbek; Mert Basaran; Fulya Yaman Agaoglu; Yavuz Dizdar; Bilge Bilgic

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Mehmet Kocaoglu

Memorial Hospital of South Bend

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