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Dive into the research topics where Beverly A. Underwood is active.

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Featured researches published by Beverly A. Underwood.


Plant Physiology | 2004

Circadian Regulation of the PhCCD1 Carotenoid Cleavage Dioxygenase Controls Emission of β-Ionone, a Fragrance Volatile of Petunia Flowers

Andrew J. Simkin; Beverly A. Underwood; Michele E. Auldridge; Holly M. Loucas; Kenichi Shibuya; Eric A. Schmelz; David G. Clark; Harry J. Klee

Carotenoids are thought to be the precursors of terpenoid volatile compounds that contribute to flavor and aroma. One such volatile, β-ionone, is important to fragrance in many flowers, including petunia (Petunia hybrida). However, little is known about the factors regulating its synthesis in vivo. The petunia genome contains a gene encoding a 9,10(9′,10′) carotenoid cleavage dioxygenase, PhCCD1. The PhCCD1 is 94% identical to LeCCD1A, an enzyme responsible for formation of β-ionone in tomato (Lycopersicon esculentum; Simkin AJ, Schwartz SH, Auldridge M, Taylor MG, Klee HJ [2004] Plant J [in press]). Reduction of PhCCD1 transcript levels in transgenic plants led to a 58% to 76% decrease in β-ionone synthesis in the corollas of selected petunia lines, indicating a significant role for this enzyme in volatile synthesis. Quantitative reverse transcription-PCR analysis revealed that PhCCD1 is highly expressed in corollas and leaves, where it constitutes approximately 0.04% and 0.02% of total RNA, respectively. PhCCD1 is light-inducible and exhibits a circadian rhythm in both leaves and flowers. β-Ionone emission by flowers occurred principally during daylight hours, paralleling PhCCD1 expression in corollas. The results indicate that PhCCD1 activity and β-ionone emission are likely regulated at the level of transcript.


The Plant Cell | 2003

Regulation of Methylbenzoate Emission after Pollination in Snapdragon and Petunia Flowers

Florence Negre; Christine M. Kish; Jennifer Boatright; Beverly A. Underwood; Kenichi Shibuya; Conrad Wagner; David G. Clark; Natalia Dudareva

The molecular mechanisms responsible for postpollination changes in floral scent emission were investigated in snapdragon cv Maryland True Pink and petunia cv Mitchell flowers using a volatile ester, methylbenzoate, one of the major scent compounds emitted by these flowers, as an example. In both species, a 70 to 75% pollination-induced decrease in methylbenzoate emission begins only after pollen tubes reach the ovary, a process that takes between 35 and 40 h in snapdragon and ∼32 h in petunia. This postpollination decrease in emission is not triggered by pollen deposition on the stigma. Petunia and snapdragon both synthesize methylbenzoate from benzoic acid and S-adenosyl-l-methionine (SAM); however, they use different mechanisms to downregulate its production after pollination. In petunia, expression of the gene responsible for methylbenzoate synthesis is suppressed by ethylene. In snapdragon, the decrease in methylbenzoate emission is the result of a decrease in both S-adenosyl-l-methionine:benzoic acid carboxyl methyltransferase (BAMT) activity and the ratio of SAM to S-adenosyl-l-homocysteine (“methylation index”) after pollination, although the BAMT gene also is sensitive to ethylene.


Plant Physiology | 2005

Ethylene-Regulated Floral Volatile Synthesis in Petunia Corollas

Beverly A. Underwood; Denise M. Tieman; Kenichi Shibuya; Richard J. Dexter; Holly M. Loucas; Andrew J. Simkin; Charles A. Sims; Eric A. Schmelz; Harry J. Klee; David G. Clark

In many flowering plants, such as petunia (Petunia × hybrida), ethylene produced in floral organs after pollination elicits a series of physiological and biochemical events, ultimately leading to senescence of petals and successful fertilization. Here, we demonstrate, using transgenic ethylene insensitive (44568) and Mitchell Diploid petunias, that multiple components of emission of volatile organic compounds (VOCs) are regulated by ethylene. Expression of benzoic acid/salicylic acid carboxyl methyltransferase (PhBSMT1 and 2) mRNA is temporally and spatially down-regulated in floral organs in a manner consistent with current models for postpollination ethylene synthesis in petunia corollas. Emission of methylbenzoate and other VOCs after pollination and exogenous ethylene treatment parallels a reduction in PhBSMT1 and 2 mRNA levels. Under cyclic light conditions (day/night), PhBSMT mRNA levels are rhythmic and precede emission of methylbenzoate by approximately 6 h. When shifted into constant dark or light conditions, PhBSMT mRNA levels and subsequent methylbenzoate emission correspondingly decrease or increase to minimum or maximum levels observed during normal conditions, thus suggesting that light may be a more critical influence on cyclic emission of methylbenzoate than a circadian clock. Transgenic PhBSMT RNAi flowers with reduced PhBSMT mRNA levels show a 75% to 99% decrease in methylbenzoate emission, with minimal changes in other petunia VOCs. These results implicate PhBSMT1 and 2 as genes responsible for synthesis of methylbenzoate in petunia.


Plant Physiology | 2004

The Central Role of PhEIN2 in Ethylene Responses throughout Plant Development in Petunia

Kenichi Shibuya; Kristin G. Barry; Joseph A. Ciardi; Holly M. Loucas; Beverly A. Underwood; Saeid Nourizadeh; Joseph R. Ecker; Harry J. Klee; David G. Clark

The plant hormone ethylene regulates many aspects of growth and development. Loss-of-function mutations in ETHYLENE INSENSITIVE2 (EIN2) result in ethylene insensitivity in Arabidopsis, indicating an essential role of EIN2 in ethylene signaling. However, little is known about the role of EIN2 in species other than Arabidopsis. To gain a better understanding of EIN2, a petunia (Petunia × hybrida cv Mitchell Diploid [MD]) homolog of the Arabidopsis EIN2 gene (PhEIN2) was isolated, and the role of PhEIN2 was analyzed in a wide range of plant responses to ethylene, many that do not occur in Arabidopsis. PhEIN2 mRNA was present at varying levels in tissues examined, and the PhEIN2 expression decreased after ethylene treatment in petals. These results indicate that expression of PhEIN2 mRNA is spatially and temporally regulated in petunia during plant development. Transgenic petunia plants with reduced PhEIN2 expression were compared to wild-type MD and ethylene-insensitive petunia plants expressing the Arabidopsis etr1-1 gene for several physiological processes. Both PhEIN2 and etr1-1 transgenic plants exhibited significant delays in flower senescence and fruit ripening, inhibited adventitious root and seedling root hair formation, premature death, and increased hypocotyl length in seedling ethylene response assays compared to MD. Moderate or strong levels of reduction in ethylene sensitivity were achieved with expression of both etr1-1 and PhEIN2 transgenes, as measured by downstream expression of PhEIL1. These results demonstrate that PhEIN2 mediates ethylene signals in a wide range of physiological processes and also indicate the central role of EIN2 in ethylene signal transduction.


Plant Biotechnology Journal | 2008

Flower-specific expression of the Agrobacterium tumefaciens isopentenyltransferase gene results in radial expansion of floral organs in Petunia hybrida

Julian C. Verdonk; Kenichi Shibuya; Holly M. Loucas; Thomas A. Colquhoun; Beverly A. Underwood; David G. Clark

SUMMARY Biotechnology has the potential to modify commercially important traits of crops, such as fruit size and stress tolerance. To date, the floricultural industry has not profited significantly from these possibilities to manipulate, for example, flower size. Cytokinins are known to be involved in many aspects of plant development, including cell division. Increasing the amount of cytokinins has the potential to increase the size of an organ, such as the flower or the fruit. The Agrobacterium tumefaciens cytokinin biosynthesis gene isopentenyltransferase (ipt) has been shown to increase cytokinin levels when introduced into plants. Moreover, it has a dramatic effect on the vegetative development of plants. The expression of the ipt gene under the control of the flower-specific Arabidopsis APETALA3 promoter in petunia (Petunia hybrida) increases the flower size dramatically, but with no effect on vegetative development. The resulting transgenic plants produced flowers with larger corolla diameter and greater total floral fresh weight. This strategy has the potential for use in the production of ornamental crops with large flowers and crop species with larger fruit.


BMC Genomics | 2007

Experimental validation of novel genes predicted in the un-annotated regions of the Arabidopsis genome

William A. Moskal; Hank Wu; Beverly A. Underwood; Wei Wang; Christopher D. Town; Yongli Xiao

BackgroundSeveral lines of evidence support the existence of novel genes and other transcribed units which have not yet been annotated in the Arabidopsis genome. Two gene prediction programs which make use of comparative genomic analysis, Twinscan and EuGene, have recently been deployed on the Arabidopsis genome. The ability of these programs to make use of sequence data from other species has allowed both Twinscan and EuGene to predict over 1000 genes that are intergenic with respect to the most recent annotation release. A high throughput RACE pipeline was utilized in an attempt to verify the structure and expression of these novel genes.Results1,071 un-annotated loci were targeted by RACE, and full length sequence coverage was obtained for 35% of the targeted genes. We have verified the structure and expression of 378 genes that were not present within the most recent release of the Arabidopsis genome annotation. These 378 genes represent a structurally diverse set of transcripts and encode a functionally diverse set of proteins.ConclusionWe have investigated the accuracy of the Twinscan and EuGene gene prediction programs and found them to be reliable predictors of gene structure in Arabidopsis. Several hundred previously un-annotated genes were validated by this work. Based upon this information derived from these efforts it is likely that the Arabidopsis genome annotation continues to overlook several hundred protein coding genes.


Plant biotechnology 2002 and beyond. Proceedings of the 10th IAPTC&B Congress, Orlando, Florida, USA, 23-28 June, 2002 | 2003

Biotechnology of Floriculture Crops — Scientific Questions and Real World Answers

David G. Clark; Holly M. Loucas; Kenichi Shibuya; Beverly A. Underwood; Kristin G. Barry; Jason Jandrew

The floriculture crop industry is technically diverse and is characterized by the use of hundreds of different plant species. Due to the large amount of genetic diversity used by this industry, there are often very complex issues that arise during crop production and during postharvest handling throughout the wholesale and retail markets. Crop production practices are often very complex, and may be complicated by the demands for precise crop timing, and the different cultural requirements of different cultivars. After the crops is produced, optimal conditions for postharvest shipping and handling are difficult to maintain, and this can lead to subsequent poor quality once the crop has arrived at the retail market. In addition to the demands of complex production and marketing systems, the demand from consumers for a constant supply of new and interesting flowering plants with unique characteristics continues to increase. Needs for product quality and availability and subsequent garden performance have driven the availability of new flowering crops to unprecedented levels over the last 5–10 years. With such a vast array of issues in floriculture crops, there is a great deal of potential for using some of these crops as model systems to study the potential for use of transgenic plants with improved horticultural characteristics. In many cases, biotechnology applications are proving to be very difficult, but there have been several advances made with engineering a wide variety of genetic traits in floriculture crops. There have also been significant gains made in cloning important genes that are proving to be involved with biological processes that scientists hope to manipulate in ornamental crops in the future.


Plant Journal | 2007

Small cysteine-rich peptides resembling antimicrobial peptides have been under-predicted in plants

Kevin A. T. Silverstein; William A. Moskal; Hank Wu; Beverly A. Underwood; Michelle A. Graham; Christopher D. Town; Kathryn A. VandenBosch


Phytochemistry | 2010

Petunia floral volatile benzenoid/phenylpropanoid genes are regulated in a similar manner

Thomas A. Colquhoun; Julian C. Verdonk; Bernardus C.J. Schimmel; Denise M. Tieman; Beverly A. Underwood; David G. Clark


Journal of Experimental Botany | 2008

Tissue-specific PhBPBT expression is differentially regulated in response to endogenous ethylene

Richard J. Dexter; Julian C. Verdonk; Beverly A. Underwood; Kenichi Shibuya; Eric A. Schmelz; David G. Clark

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Julian C. Verdonk

Wageningen University and Research Centre

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Hank Wu

J. Craig Venter Institute

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