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Featured researches published by Bing Yu.


Optics Express | 2010

Performance metrics of an optical spectral imaging system for intra-operative assessment of breast tumor margins

Torre M. Bydlon; Stephanie A. Kennedy; Lisa M. Richards; J. Quincy Brown; Bing Yu; Marlee K. Junker; Jennifer Gallagher; Joseph Geradts; Lee Gravatt Wilke; Nimmi Ramanujam

As many as 20-70% of patients undergoing breast conserving surgery require repeat surgeries due to a close or positive surgical margin diagnosed post-operatively [1]. Currently there are no widely accepted tools for intra-operative margin assessment which is a significant unmet clinical need. Our group has developed a first-generation optical visible spectral imaging platform to image the molecular composition of breast tumor margins and has tested it clinically in 48 patients in a previously published study [2]. The goal of this paper is to report on the performance metrics of the system and compare it to clinical criteria for intra-operative tumor margin assessment. The system was found to have an average signal to noise ratio (SNR) >100 and <15% error in the extraction of optical properties indicating that there is sufficient SNR to leverage the differences in optical properties between negative and close/positive margins. The probe had a sensing depth of 0.5-2.2 mm over the wavelength range of 450-600 nm which is consistent with the pathologic criterion for clear margins of 0-2 mm. There was <1% cross-talk between adjacent channels of the multi-channel probe which shows that multiple sites can be measured simultaneously with negligible cross-talk between adjacent sites. Lastly, the system and measurement procedure were found to be reproducible when evaluated with repeated measures, with a low coefficient of variation (<0.11). The only aspect of the system not optimized for intra-operative use was the imaging time. The manuscript includes a discussion of how the speed of the system can be improved to work within the time constraints of an intra-operative setting.


IEEE Journal of Selected Topics in Quantum Electronics | 2010

Optical Assesssment of Tumor Resection Margins in the Breast

J. Quincy Brown; Torre M. Bydlon; Lisa M. Richards; Bing Yu; Stephanie A. Kennedy; Joseph Geradts; Lee G. Wilke; Marlee K. Junker; Jennifer Gallagher; William T. Barry; Nimmi Ramanujam

Breast conserving surgery, in which the breast tumor and the surrounding normal tissue are removed, is the primary mode of treatment for invasive and in situ carcinomas of the breast, conditions that affect nearly 200 000 women annually. Of these nearly 200 000 patients who undergo this surgical procedure, between 20%-70% of them may undergo additional surgeries to remove tumor that was left behind in the first surgery, due to the lack of intraoperative tools that can detect whether the boundaries of the excised specimens are free from residual cancer. Optical techniques have many attractive attributes that may make them useful tools for intraoperative assessment of breast tumor resection margins. In this paper, we discuss clinical design criteria for intraoperative breast tumor margin assessment and review optical techniques applied to this problem. In addition, we report on the development and clinical testing of quantitative diffuse reflectance imaging (Q-DRI) as a potential solution to this clinical need. Q-DRI is a spectral imaging tool, which has been applied to 55 resection margins in 48 patients at Duke University Medical Center. Clear sources of contrast between cancerous and cancer-free resection margins were identified with the device, and resulted in an overall accuracy of 75% in detecting positive margins.


Journal of Biomedical Optics | 2008

Cost-effective diffuse reflectance spectroscopy device for quantifying tissue absorption and scattering in vivo

Bing Yu; Justin Y. Lo; T. F. Kuech; Gregory M. Palmer; Janelle E. Bender; Nirmala Ramanujam

A hybrid optical device that uses a multimode fiber coupled to a tunable light source for illumination and a 2.4-mm photodiode for detection in contact with the tissue surface is developed as a first step toward our goal of developing a cost-effective, miniature spectral imaging device to map tissue optical properties in vivo. This device coupled with an inverse Monte Carlo model of reflectance is demonstrated to accurately quantify tissue absorption and scattering in tissue-like turbid synthetic phantoms with a wide range of optical properties. The overall errors for quantifying the absorption and scattering coefficients are 6.0+/-5.6 and 6.1+/-4.7%, respectively. Compared with fiber-based detection, having the detector right at the tissue surface can significantly improve light collection efficiency, thus reducing the requirement for sophisticated detectors with high sensitivity, and this design can be easily expanded into a quantitative spectral imaging system for mapping tissue optical properties in vivo.


Biomedical Optics Express | 2014

Diffuse reflectance spectroscopy of epithelial tissue with a smart fiber-optic probe

Bing Yu; Amy T. Shah; Vivek Krishna Nagarajan; Daron G. Ferris

Diffuse reflectance spectroscopy (DRS) with a fiber-optic probe can noninvasively quantify the optical properties of epithelial tissues and has shown the potential as a cost-effective, fast and sensitive tool for diagnosis of early precancerous changes in the cervix and oral cavity. However, current DRS systems are susceptible to several sources of systematic and random errors, such as uncontrolled probe-to-tissue pressure and lack of a real-time calibration that can significantly impair the measurement accuracy, reliability and validity of this technology as well as its clinical utility. In addition, such systems use bulky, high power and expensive optical components which impede their widespread use in low- and middle-income countries (LMICs) where epithelial cancer related death is disproportionately high. In this paper we report a portable, easy-to-use and low cost, yet accurate and reliable DRS device that can aid in the screening and diagnosis of oral and cervical cancer. The device uses an innovative smart fiber-optic probe to eliminate operator bias, state-of-the-art photonics components to reduce size and power consumption, and automated software to reduce the need of operator training. The device showed a mean error of 1.4 ± 0.5% and 6.8 ± 1.7% for extraction of phantom absorption and reduced scattering coefficients, respectively. A clinical study on healthy volunteers indicated that a pressure below 1.0 psi is desired for oral mucosal tissues to minimize the probe effects on tissue physiology and morphology.


Optics Express | 2009

A strategy for quantitative spectral imaging of tissue absorption and scattering using light emitting diodes and photodiodes.

Justin Y. Lo; Bing Yu; Henry L. Fu; Janelle E. Bender; Gregory M. Palmer; T. F. Kuech; Nirmala Ramanujam

A diffuse reflectance spectroscopy system was modified as a step towards miniaturization and spectral imaging of tissue absorption and scattering. The modified system uses a tunable source and an optical fiber for illumination and a photodiode in contact with tissue for detection. Compared to the previous system, it is smaller, less costly, and has comparable performance in extracting optical properties in tissue phantoms. Wavelength reduction simulations show the feasibility of replacing the source with LEDs to further decrease system size and cost. Simulated crosstalk analysis indicates that this evolving system can be multiplexed for spectral imaging in the future.


IEEE Transactions on Biomedical Engineering | 2009

Fluorescence Spectroscopy: An Adjunct Diagnostic Tool to Image-Guided Core Needle Biopsy of the Breast

Changfang Zhu; Elizabeth S. Burnside; Gale A. Sisney; Lonie R. Salkowski; Josephine Harter; Bing Yu; Nirmala Ramanujam

We explored the use of a fiber-optic probe for in vivo fluorescence spectroscopy of breast tissues during percutaneous image-guided breast biopsy. A total of 121 biopsy samples with accompanying histological diagnosis were obtained clinically and investigated in this study. The tissue spectra were analyzed using partial least-squares analysis and represented using a set of principal components (PCs) with dramatically reduced data dimension. For nonmalignant tissue samples, a set of PCs that account for the largest amount of variance in the spectra displayed correlation with the percent tissue composition. For all tissue samples, a set of PCs was identified using a Wilcoxon rank-sum test as showing statistically significant differences between: 1) malignant and fibrous/benign; 2) malignant and adipose; and 3) malignant and nonmalignant breast samples. These PCs were used to distinguish malignant from other nonmalignant tissue types using a binary classification scheme based on both linear and nonlinear support vector machine (SVM) and logistic regression (LR). For the sample set investigated in this study, the SVM classifier provided a cross-validated sensitivity and specificity of up to 81% and 87%, respectively, for discrimination between malignant and fibrous/benign samples, and up to 81% and 81%, respectively, for discriminating between malignant and adipose samples. Classification based on LR was used to generate receiver operator curves with an area under the curve (AUC) of 0.87 for discriminating malignant versus fibrous/benign tissues, and an AUC of 0.84 for discriminating malignant from adipose tissue samples. This study demonstrates the feasibility of performing fluorescence spectroscopy during clinical core needle breast biopsy, and the potential of this technique for identifying breast malignancy in vivo.


IEEE Photonics Technology Letters | 2004

Thermally tunable extrinsic Fabry-Perot filter

Bing Yu; Gary Pickrell; Anbo Wang

This letter describes a thermally tunable filter of extremely low cost, suitable for optical sensing, spectrometry, and video distribution. The filter utilizes a high-finesse extrinsic fiber Fabry-Pe/spl acute/rot interferometer formed by fusion bonding of two mirror-coated single-mode fibers to a short piece of borosilicate tubing. Continuous wavelength tuning is achieved using a Peltier device. We demonstrate a prototype filter operating at 1550 nm with a tuning range of 90.8 nm and a temperature sensitivity of 1.63 nm//spl deg/C. The filter features polarization independence, high repeatability, and inherently low drift and low insertion loss.


Optics Express | 2009

Noninvasive monitoring of tissue hemoglobin using UV-VIS diffuse reflectance spectroscopy: a pilot study.

Janelle E. Bender; Allan Bruce Shang; Eugene W. Moretti; Bing Yu; Lisa M. Richards; Nirmala Ramanujam

We conducted a pilot study on 10 patients undergoing general surgery to test the feasibility of diffuse reflectance spectroscopy in the visible wavelength range as a noninvasive monitoring tool for blood loss during surgery. Ratios of raw diffuse reflectance at wavelength pairs were tested as a first-pass for estimating hemoglobin concentration. Ratios can be calculated easily and rapidly with limited post-processing, and so this can be considered a near real-time monitoring device. We found the best hemoglobin correlations were when ratios at isosbestic points of oxy- and deoxyhemoglobin were used, specifically 529/500 nm. Baseline subtraction improved correlations, specifically at 520/509 nm. These results demonstrate proof-of-concept for the ability of this noninvasive device to monitor hemoglobin concentration changes due to surgical blood loss. The 529/500 nm ratio also appears to account for variations in probe pressure, as determined from measurements on two volunteers.


Optics Letters | 2008

Diffuse reflectance spectroscopy with a self-calibrating fiber optic probe

Bing Yu; Henry Fu; Torre M. Bydlon; Janelle E. Bender; Nirmala Ramanujam

Calibration of the diffuse reflectance spectrum for instrument response and time-dependent fluctuation as well as interdevice variations is complicated, time consuming, and potentially inaccurate. We describe a novel fiber optic probe with a real-time self-calibration capability that can be used for tissue optical spectroscopy. The probe was tested in a number of liquid phantoms over a relevant range of tissue optical properties. Absorption and scattering coefficients are extracted with an average absolute error and standard deviation of 6.9%+/-7.2% and 3.5%+/-1.5%, respectively.


Journal of Lightwave Technology | 2006

Analysis of fiber fabry-Pe/spl acute/rot interferometric sensors using low-coherence light sources

Bing Yu; Anbo Wang; Gary Pickrell

Sensitivity, fringe contrast, and dynamic range are the three most important parameters in the theoretical performance evaluation of fiber Fabry-Pe/spl acute/rot (F-P) interferometric sensors. This paper theoretically models the effect that the cavity length, the F-P finesse, the source bandwidth, mirror misalignments and symmetry play in the sensitivity, fringe contrast, and dynamic range of a fiber F-P interferometer interrogated with a low-coherence light source. The developed systematic fiber F-P interferometer analysis approach and the numerical analysis results on both guided and unguided fiber F-P interferometer (FFPI) sensors may provide useful guidance for sensor design optimization.

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T. F. Kuech

University of Wisconsin-Madison

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