C. Kenneth Dodd

Monitoring vertebrate populations

Preface. Basic Concepts. Sampling Designs and Related Topics. Enumeration Methods. Community Surveys. Detection of a Trend in Population Estimates. Guidelines for Planning Surveys. Fish. Amphibians and Reptiles. Birds. Mammals. Glossary of Terms. Glossary of Notation. Sampling Estimators. Common and Scientific Names of Cited Vertebrates. Subject Index.

Challenges in Evaluating the Impact of the Trade in Amphibians and Reptiles on Wild Populations

Abstract Amphibians and reptiles are taken from the wild and sold commercially as food, pets, and traditional medicines. The overcollecting of some species highlights the need to assess the trade and ensure that it is not contributing to declines in wild populations. Unlike most countries, the United States tracks the imports and exports of all amphibians and reptiles. Records from 1998 to 2002 reveal a US trade of several million wild-caught amphibians and reptiles each year, although many shipments are not recorded at the species level. The magnitude and content of the global commercial trade carries even greater unknowns. The absence of accurate trade and biological information for most species makes it difficult to establish whether current take levels are sustainable. The void of information also implies that population declines due to overcollecting could be going undetected. Policy changes to acquire baseline biological information and ensure a sustainable trade are urgently needed.

Effects of habitat fragmentation on a stream-dwelling species, the flattened musk turtle Sternotherus depressus

Abstract The flattened musk turtle Sternotherus depressus has disappeared from more than half of its former range because of habitat modifications to stream and river channels in the Warrior River Basin, Alabama. Only 6·9% of its probable historic range contains relatively healthy populations, and most populations are fragmented by extensive areas of unsuitable habitat. Turtles in the best remaining habitats continue to be vulnerable to disease and human-related disturbance, collecting and habitat modification. These factors lead to population declines and abnormal population structure. Habitat fragmentation, especially in small populations, increases vulnerability to human-caused catastrophes and demographic accidents, and could lead to eventual extinction. The threats facing fragmented populations of this turtle probably parallel those affecting many other stream-dwelling species throughout the southeastern United States.

THE INFLUENCE OF DISTURBANCE EVENTS ON SURVIVAL AND DISPERSAL RATES OF FLORIDA BOX TURTLES

Disturbances have the potential to cause long-term effects to ecosystem structure and function, and they may affect individual species in different ways. Long-lived vertebrates such as turtles may be at risk from such events, inasmuch as their life histories preclude rapid recovery should extensive mortality occur. We applied capture-mark-recapture models to assess disturbance effects on a population of Florida box turtles (Terrapene carolina bauri) on Egmont Key, Florida, USA. Near the midpoint of the study, a series of physical disturbances affected the island, from salt water overwash associated with several tropical storms to extensive removal of nonindigenous vegetation. These disturbances allowed us to examine demographic responses of the turtle population and to determine if they affected dispersal throughout the island. Adult survival rates did not vary significantly either between sexes or among years of the study. Survival rates did not vary significantly between juvenile and adult turtles, or among years of the study. Furthermore, neither adult nor juvenile survival rates differed significantly between pre- and post-disturbance. However, dispersal rates varied significantly among the four major study sites, and dispersal rates were higher during the pre-disturbance sampling periods compared to post-disturbance. Our results suggest few long-term effects on the demography of the turtle population. Florida box turtles responded to tropical storms and vegetation control by moving to favorable habitats minimally affected by the disturbances and remaining there. As long as turtles and perhaps other long-lived vertebrates can disperse to non-disturbed habitat, and high levels of mortality do not occur in a population, a long life span may allow them to wait out the impact of disturbance with potentially little effect on long-term population processes.

Detection Probabilities and Site Occupancy Estimates for Amphibians at Okefenokee National Wildlife Refuge

Abstract We conducted an amphibian inventory at Okefenokee National Wildlife Refuge from August 2000 to June 2002 as part of the U.S. Department of the Interiors national Amphibian Research and Monitoring Initiative. Nineteen species of amphibians (15 anurans and 4 caudates) were documented within the Refuge, including one protected species, the Gopher Frog Rana capito. We also collected 1 y of monitoring data for amphibian populations and incorporated the results into the inventory. Detection probabilities and site occupancy estimates for four species, the Pinewoods Treefrog (Hyla femoralis), Pig Frog (Rana grylio), Southern Leopard Frog (R. sphenocephala) and Carpenter Frog (R. virgatipes) are presented here. Detection probabilities observed in this study indicate that spring and summer surveys offer the best opportunity to detect these species in the Refuge. Results of the inventory suggest that substantial changes may have occurred in the amphibian fauna within and adjacent to the swamp. However, monitoring the amphibian community of Okefenokee Swamp will prove difficult because of the logistical challenges associated with a rigorous statistical assessment of status and trends.

Cost of living in an unpredictable environment: The ecology of striped newts Notophthalmus perstriatus during a prolonged drought

I studied a striped newt (Notophthalmusperstriatus) population for 62.5 months from 1985 through 1990 at a temporary pond in uplands habitat of north-central Florida. A severe drought affected northern Florida during the study, and the pond held water for a total of only 14 months. Data on size structure, activity patterns, and reproduction are based on more than 2500 captures. Most newts were captured in 1986 and 1987 when water occasionally filled the pond. Striped newts entered the pond any time from late autumn through late spring depending on rainfall. If water was present, they remained until it dried. If water was absent, they emigrated but returned if rains occurred later in the season. At Breezeway Pond, larvae transformed only during the spring of 1987 and few metamorphosed juveniles were captured. The size structure of the newt population initially was unimodal, but, as the drought continued, the structure shifted toward larger individuals. A decline in the breeding population occurred from 1988 through 1990 as drought severity increased. I suggest that the lack of a clearly defined sex differential during immigration and the extended annual activity period allow adult striped newts to maximally exploit temporary breeding habitats that are available randomly both within and between years.

USING GROUND-PLACED PVC PIPES TO MONITOR HYLID TREEFROGS: CAPTURE BIASES

Abstract We sampled a population of two species of hylid treefrogs using 90 vertical ground-placed PVC pipes of 3 diameters positioned along a 1500-m transect at a forest-open pond ecotone in north-central Florida in order to identify potential capture biases. We recorded 1,981 treefrog observations (778 unmarked, 1,203 recaptures) in 8 months. Our results identified species-specific seasonal and weather-related variation in capture by pipe diameter and pipe location. These biases may limit the usefulness of this sampling technique when monitoring long-term treefrog population status and trends.

Estimation of Flattened Musk Turtle (Sternotherus depressus) Survival, Recapture, and Recovery Rate during and after a Disease Outbreak

Abstract We estimated survivorship, recapture probabilities and recovery rates in a threatened population of Flattened Musk Turtles (Sternotherus depressus) through a disease outbreak in Alabama in 1985. We evaluated a set of models for the demographic effects of disease by analyzing recaptures and recoveries simultaneously. Multiple-model inference suggested survival was temporally dynamic, whereas recapture probability was sex- and age-specifc. Biweekly survivorship declined from 98–99% before to 82–88% during the outbreak. Live recapture was twice as likely for male turtles relative to juveniles or females, whereas dead recoveries varied only slightly by sex and age. Our results suggest modest reduction in survival over a relatively short time period may severely affect population status.

The status of the Red Hills salamander Phaeognathus hubrichti, Alabama, USA, 1976-1988

Abstract A total of 144 sites in the Red Hills Physiographic Province in south-central Alabama, USA, were surveyed in 1988 for burrows of the Red Hills salamander Phaeognathus hubrichti. Of 92 sites surveyed in 1976, no change occurred in the habitat at 54 sites, conditions improved at 19 sites and deteriorated at 18 sites following selective or clear cutting. An additional 14 of 52 sites not surveyed in 1976 were adversely affected by logging. Burrows were most often found on high ( x = 17 m ), steep ( x = 50° ), uncut slopes containing a high soil moisture content ( x = 57% ) and full tree canopy. Slope angle and soil pH did not affect burrow abundance. Burrow openings averaged 10·9 mm high × 15·3 mm wide. Burrow angle was negatively correlated with burrow width and slope angle but low r2 values indicate that little of the variation was explained by these variables. Burrows were most often found on the upper two-thirds of slopes; burrows on slopes affected by cutting were found in the middle of the slope where they were less prone to disturbance and desiccation. Although most timber companies claim to no longer cut steep slopes in order to protect salamanders, detrimental forestry practices are still occuring. In some instances, Red Hills salamanders survive selective and clear cutting, but the persistence and viability of affected populations remain unknown. Suggestions are made to reduce impacts from forestry operations. Acquisition of 25 sites containing viable salamander populations and retention as a threatened species under United States federal law are recommended.

Changes in a Northwestern Florida Gulf Coast Herpetofaunal Community Over a 28-y Period

ABSTRACT Population declines of amphibians and reptiles throughout the world have led to the initiation of projects to monitor their status and trends. Historical collections give an indication of which species occurred in an area at one time, although the ambiguity surrounding locations and environmental conditions associated with collection decreases the value of this information source. Resampling using the same general protocols can give valuable insights to changes in community structure. However, this is only feasible when sampling methodology and exact site locations are known. From 2002–2005 we resampled 12 sites in St. Marks National Wildlife Refuge in Floridas panhandle, an area in which intensive herpetological surveys were conducted in 1977–1979. We documented a general decrease in species richness among the diversely managed sites, changes in dominant species and diversity and an increasing trend toward homogeneity of the herpetofaunal community among habitats. Changes were attributed to four causes: 28-y of forest community succession, changes in management practices, non-detection of species due to variation in sampling conditions and a decrease in occupancy by four amphibians and three reptiles. The use of population and habitat-related indexes helped define possible influences on community change and can be used to target species for monitoring. Declines of these seven species are of concern, especially considering the protected status of the refuge and its increasing isolation as surrounding landscapes are converted to urbanized settings.