Carl F. Ijames

Potent dipeptidylketone inhibitors of the cysteine protease cathepsin K

Cathepsin K (EC 3.4.22.38) is a cysteine protease of the papain superfamily which is selectively expressed within the osteoclast. Several lines of evidence have pointed to the fact that this protease may play an important role in the degradation of the bone matrix. Potent and selective inhibitors of cathepsin K could be important therapeutic agents for the control of excessive bone resorption. Recently a series of peptide aldehydes have been shown to be potent inhibitors of cathepsin K. In an effort to design more selective and metabolically stable inhibitors of cathepsin K, a series of electronically attenuated alkoxymethylketones and thiomethylketones inhibitors have been synthesized. The X-ray co-crystal structure of one of these analogues in complex with cathepsin K shows the inhibitor binding in the primed side of the enzyme active site with a covalent interaction between the active site cysteine 25 and the carbonyl carbon of the inhibitor.

An external secondary ion source for fourier transform mass spectrometry

A differentially pumped external secondary ion source for Fourier transform mass spectrometry is described. Installation does not interfere with other experiments such as laser desorption or photodissociation. Spectra of cesium iodide clusters (with ions up to m/z 8187), polyethylene glycol 1000, and histidine from both glycerol and dithiothreitol-dithioerythritol matrices are reported. The ion with m/z 156 from histidine was recorded with mass resolution of 160,000.

Iron Carboxylate Oxygen-Centered-Triangle Complexes Detected During Electrospray Use of Organic Acid Modifiers with a Comment on the Finnigan TSQ-700 Electrospray Inlet System

Use of infusion methods rather than high-performance liquid chromatography allowed us to confirm the observation that solutions of propionic acid-isopropanol restore sensitivity lost due to trifluoroacetic acid in electrospray mass spectra of basic substances, particularly peptides. In this work, when propionic acid-isopropanol was used, we detected an abundant ion with m/z 622 that shifted to m/z 538 when we substituted acetic acid-methanol for the propionic acid-isopropanol. Via accurate mass measurement and tandem mass spectrometry the origin of the ion was identified as the complex Fe3O(O2CR)6(L)0–3, where L is one of several ligands from solvent or water. The grounding arrangement of the Finnigan TSQ-700 electrospray source produces electrolytic currents that may accentuate the abundance of this complex and specifically produces observable gas bubbles that adversely affect the spray stability.

Fourier transform mass spectrometry using random-noise excitation

Abstract Previous Fourier transform mass spectrometry (FTMS) measurements have commonly utilized frequency swept excitation. This communication describes the first demonstration of random-noise excitation for FTMS employing a simple noise excitation source. Characteristics of the source are discussed and a random excitation spectrum is compared with the corresponding frequency sweep excitation spectrum.

A low voltage ion transport system for external ionization fourier transform mass spectrometry

An efficient ion transport system that interfaces external ion sources with a commercial dual-cell Fourier transform mass spectrometry (FTMS) system so as to retain maximum experimental flexibility has been constructed. Electrostatic lenses were used for ion transfer with potentials less than 200 V to preclude discharges. Spectra were recorded by thermal ionization and by electrospray ionization. Other high pressure ionization methods can be easily added to the external ion source chamber, making this a general solution for ion transport into an FTMS system. The efficiency of ion transfer was measured to be approximately 30%. A pressure ratio of 105 between the external ion source chamber and the second cell has been demonstrated. The system incorporates a computer-controlled gate valve to isolate the cell regions from the external ion source chamber, permitting optimal conditions for ion injection and accumulation, and then after closing the valve, recording spectra at low pressure with high resolution. Spectra of Gramicidin S (resolution 90,000 at m/z 1164), aprotinin (resolution 410,000 at m/z 1304), and horse heart cytochrome c (resolution 50,000 at m/z 1546) are shown.

Pulsed-valve chemical ionization for gas chromatography/fourier-transform mass spectrometry

Abstract The pressure requirements for chemical ionization g.c./F.t.m.s. which restrict mass resolution and accuracy are overcome through use of a pulsed valve that provides momentary reagent gas pressures. For alternate electron impact (EI)/chemical ionization (c.i.) g.c./F.t.m.s., similar resolution for both e.i. and c.i. data is demonstrated. The efficiency of chemical ionization with the pulsed valve is similar to static high pressure c.i. measurements of several model compounds. Results from the analysis of peppermint oil and a fuel additive illustrate the potential information available from a single g.c./F.t.m.s. experiment.

Identification of 1’,5’-naphthyridinophthalone and its quantification in the color additive D&C Yellow No. 10 (Quinoline Yellow) using high-performance liquid chromatography

ABSTRACT The present work reports the identification and characterization of a contaminant, 2-(2ʹ-(1,5-naphthyridinyl))-1,3-indanedione (1ʹ,5ʹ-naphthyridinophthalone, 1,5NP), in the color additive D&C Yellow No. 10 (U.S.-certifiable form of Quinoline Yellow), together with its quantification in batches of the color additive certified by the U.S. Food and Drug Administration (USFDA). The impurity, which is a compound not previously reported in the literature, was synthesised and characterised for use as a reference material. Test portions from 26 certified batches of D&C Yellow No. 10 submitted to USFDA by four domestic and four foreign manufacturers were analyzed for 1,5NP using high-performance liquid chromatography. The results revealed a wide range of 1,5NP levels across batches, with 18 (69.2%) of the test portions containing amounts from 0.32 to 169.94 µg g−1 while the remaining test portions contained no detectable (<0.07 µg g−1) amounts. Samples of the European and Japanese forms of Quinoline Yellow were also analyzed and found to contain a wide range of 1,5NP levels. The varying levels of 1,5NP in all three forms of Quinoline Yellow suggest that contamination can be significantly decreased or eliminated through manufacturing adjustments. Since 1,5NP is closely related to a D&C Yellow No. 10 contaminant (quinophthalone) that has a USFDA-specified limit of 4 µg g−1 and is a known allergen, assessment of the possible allergenicity of 1,5NP is warranted. Graphical Abstract