Carlo Baroni

Mutation and Evolutionary Rates in Adélie Penguins from the Antarctic

Precise estimations of molecular rates are fundamental to our understanding of the processes of evolution. In principle, mutation and evolutionary rates for neutral regions of the same species are expected to be equal. However, a number of recent studies have shown that mutation rates estimated from pedigree material are much faster than evolutionary rates measured over longer time periods. To resolve this apparent contradiction, we have examined the hypervariable region (HVR I) of the mitochondrial genome using families of Adélie penguins (Pygoscelis adeliae) from the Antarctic. We sequenced 344 bps of the HVR I from penguins comprising 508 families with 915 chicks, together with both their parents. All of the 62 germline heteroplasmies that we detected in mothers were also detected in their offspring, consistent with maternal inheritance. These data give an estimated mutation rate (μ) of 0.55 mutations/site/Myrs (HPD 95% confidence interval of 0.29–0.88 mutations/site/Myrs) after accounting for the persistence of these heteroplasmies and the sensitivity of current detection methods. In comparison, the rate of evolution (k) of the same HVR I region, determined using DNA sequences from 162 known age sub-fossil bones spanning a 37,000-year period, was 0.86 substitutions/site/Myrs (HPD 95% confidence interval of 0.53 and 1.17). Importantly, the latter rate is not statistically different from our estimate of the mutation rate. These results are in contrast to the view that molecular rates are time dependent.

Abandoned penguin rookeries as Holocene paleoclimatic indicators in Antarctica

Penguins are sensitive indicators of the Antarctic climate and of the environmental parameters that limit their presence and distribution. Paleoenvironmental data, obtained from the study of abandoned penguin rookeries ( Pygoscelis adeliae ) along the Victoria Land coast in Antarctica, indicate 14C date of 11-13 ka for the oldest abandoned rookery and supply new information about the timing of glacier retreat in southern Victoria Land after the last glacial maximum. The continuous presence of the Adelie penguins is documented from 7 ka. According to our data, the limiting factors that control the presence of penguins along the coast of Victoria Land changed during the Holocene. Whereas several colonies were occupied for very long periods, other sites were used for more or less extended periods and then abandoned. The greatest diffusion of rookeries occurred between 3 and 4 ka, a period of particularly favorable environmental conditions that has never been repeated. It was followed by a sudden decrease in the number of penguin rookeries shortly after 3 ka. This event has been attributed to an increase of the sea-ice extension and may have been correlated to a worldwide phase of climate change near the Subboreal-Subatlantic boundary. A minor phase of penguin reoccupation occurred locally in the eighth to fourteenth centuries (A.D.). Because the presence and number of penguins reflect the state of health of the Antarctic marine ecosystem, it is important to evaluate the variations in their distribution in the past, in the absence of human-induced changes.

High mitogenomic evolutionary rates and time dependency

Using entire modern and ancient mitochondrial genomes of Adélie penguins (Pygoscelis adeliae) that are up to 44000 years old, we show that the rates of evolution of the mitochondrial genome are two to six times greater than those estimated from phylogenetic comparisons. Although the rate of evolution at constrained sites, including nonsynonymous positions and RNAs, varies more than twofold with time (between shallow and deep nodes), the rate of evolution at synonymous sites remains the same. The time-independent neutral evolutionary rates reported here would be useful for the study of recent evolutionary events.

Rapid response of a marine mammal species to holocene climate and habitat change.

Environmental change drives demographic and evolutionary processes that determine diversity within and among species. Tracking these processes during periods of change reveals mechanisms for the establishment of populations and provides predictive data on response to potential future impacts, including those caused by anthropogenic climate change. Here we show how a highly mobile marine species responded to the gain and loss of new breeding habitat. Southern elephant seal, Mirounga leonina, remains were found along the Victoria Land Coast (VLC) in the Ross Sea, Antarctica, 2,500 km from the nearest extant breeding site on Macquarie Island (MQ). This habitat was released after retreat of the grounded ice sheet in the Ross Sea Embayment 7,500–8,000 cal YBP, and is within the range of modern foraging excursions from the MQ colony. Using ancient mtDNA and coalescent models, we tracked the population dynamics of the now extinct VLC colony and the connectivity between this and extant breeding sites. We found a clear expansion signal in the VLC population ∼8,000 YBP, followed by directional migration away from VLC and the loss of diversity at ∼1,000 YBP, when sea ice is thought to have expanded. Our data suggest that VLC seals came initially from MQ and that some returned there once the VLC habitat was lost, ∼7,000 years later. We track the founder-extinction dynamics of a population from inception to extinction in the context of Holocene climate change and present evidence that an unexpectedly diverse, differentiated breeding population was founded from a distant source population soon after habitat became available.

Holocene raised beaches at Terra Nova Bay, Victoria Land, Antarctica

Abstract More than 40 14C dates for raised beaches at Terra Nova Bay ranging from the present to 7505 ± 230 yr B.P. supply minimum or maximum limiting ages that bracket a relative sea-level curve for this part of Victoria Land. Most samples consist of guano and penguin remains collected from abandoned nesting sites on beach deposits. Up to four 14C dates in stratigraphic sequence have been obtained in two soil profiles. Other samples consist of marine shells collected both within and on the surface of raised beaches. All 14C ages for organisms that lived or fed in circumantarctic waters were corrected for a large reservoir effect. The calibrated ages delimit a first relative sea-level curve for Victoria Land. Rates of uplift ranged from about 10 mm/yr following deglaciation to about 2 mm/yr in the last 3 millennia. Widespread presence of Adelie penguin nesting sites suggests that Terra Nova Bay was deglaciated before 7065 ± 250 yr B.P. ( 7059 6439 cal yr B.P.), when environmental conditions in the coastal area were similar to the present ones.

Cenozoic climatic change in Antarctica recorded by volcanic activity and landscape evolution

A long-lasting Cenozoic record (∼50 m.y.) of alkaline igneous rocks characterizes northern Victoria Land, Antarctica. Landscape analysis allows distinction between older volcanic and intrusive rocks with well-developed alpine topography sculptured by wet-based glaciers, and younger volcanic cones lacking these features. Many K-Ar and Rb-Sr dates testify that the erosion that formed the alpine landscape ceased between ca. 8.2 and 7.5 Ma. Since ca. 8 Ma, morphological evolution has been driven by cold-based glaciers; warm-based glaciers were no longer active. That this change affected a 300-km-long coastal area suggests a persistent cause of global significance. Glacier dynamics control landscape shaping as a function of ice thickness and temperature, which are driven by climatic conditions. In this view, a significant climatic change occurred in northern Victoria Land between 8.2 and 7.5 Ma. The perfectly preserved serrated alpine ridges, with their delicate spires, testify that no warm-based ice sheets overrode the region after 7.5 Ma and that polar conditions held sway in the Pliocene and Pleistocene Epochs.

Fluvial origin of the valley system in northern Victoria Land (Antarctica) from quantitative geomorphic analysis

A network of sinuous valleys with typical dendritic pattern characterizes northern Victoria Land (NVL) in Antarctica. Subparallel to parallel and angular to rectangular patterns are also present. Quantitative geomorphic analysis of the valley network has been carried out utilizing GIS spatial analysis. While drainage densities and drainage frequencies show low values, segments of the NVL valley network are substantially well organized, as indicated by bifurcation ratio (R b ) and direct bifurcation ratio (R bd ) parameters. All basins faithfully adhere to Horton’s laws of drainage network composition. Quantitative geomorphic analysis suggests that the valley system can be ascribed to fl uvial origin and that consequently, a morphoclimatic system completely different from that of present day must have driven its carving. The resulting data provide indications about the origin of the valley network and this invaluable information can be used for the reconstruction of earlier phases of glacial history and climatic and tectonic evolution of this signifi cant Antarctic region. Fluvial erosion enhanced the denudation of the Transantarctic Mountains from at least 55 Ma to at least the Eocene-Oligocene boundary (ca 34 Ma). Fluvial basins adapted to the tectonic structure, following the main regional fault systems. A well-developed alpine topography postdates the fl uvial morphology. Temperate glaciers were responsible for denudation until the Late Miocene. Parasitic glaciers presently mantle the previously sculpted topography. Present-day glacial erosion is negligible and denudation has been exceedingly slow since 7.5 Ma.

Holocene glacier variations in the Terra Nova Bay area (Victoria Land, Antarctica)

Information on Holocene glacier variations in Antarctica is limited and sometimes contradictory. However, if the behaviour of the glaciers during the recent past can be clarified, their sensitivity to climatic changes can be evaluated and their contribution to the sea level variation may be predicted. Through the study of local glaciers and floating ice shelves in the Terra Nova Bay area, new information has been gathered. Between 7500 and 5000 yr B.P., after the glacial retreat which followed the Last Glacial Maximum, the Nansen Ice Sheet and the Hells Gate ice shelf were a few kilometres less extensive than they are now. During the second half of the Holocene, both the local glaciers and the ice shelves advanced to positions that were more extensive than their present ones, although not all the variations are adequately dated. A retreat phase of the Edmonson Point glacier occurred during late Middle Ages between 920–1050 A.D. and 1270–1400 A.D. as documented by ten 14 C dates obtained from shells in ice-cored moraines. A subsequent advance occurred after the 15th century in a period corresponding to the Little Ice Age .

Limited Pliocene/Pleistocene glaciation in Deep Freeze Range, northern Victoria Land, Antarctica, derived from in situ cosmogenic nuclides

The question of how stable the climate in Antarctica has been during the last few million years compared to the rest of the planet is still controversial. This study attempts to add new information to the discussion by reconstructing the timing and spatial extent of glacial advances in northern Victoria Land over tens of thousands to millions of years. In Terra Nova Bay region, surface exposure ages and erosion rates of glacially rounded bedrock and glacial erratics have been determined using the cosmogenic nuclides 3He, 10Be and 21Ne. Three morphological units have been analysed. They yield minimum ages of 11 to 34 ka, 309 ka, and 2.6 Ma, respectively. Erosion rates were as low as 20 cm Ma−1 since middle Pliocene time. Taking erosion into account, the oldest surface is 5.3 Ma old. Pleistocene glacier advances had considerable extent, reaching up to 780 m above modern ice levels, but have been restricted to the valleys since at least mid-Pliocene. The existence of landscapes of mid-Pliocene age in northern Victoria Land implies that the climatic stability of the McMurdo Dry Valleys is not unique within the Transantarctic Mountains, but rather the expression of a constantly cold and hyperarid climate regime in entire Victoria Land.

Surface exposure ages imply multiple low-amplitude Pleistocene variations in East Antarctic Ice Sheet, Ricker Hills, Victoria Land

Abstract One of the major issues in (palaeo-) climatology is the response of Antarctic ice sheets to global climate changes. Antarctic ice volume has varied in the past but the extent and timing of these fluctuations are not well known. In this study, we address the question of amplitude and timing of past Antarctic ice level changes by surface exposure dating using in situ produced cosmogenic nuclides (10Be and 21Ne). The study area lies in the Ricker Hills, a nunatak at the boundary of the East Antarctic Ice Sheet in southern Victoria Land. By determining exposure ages of erratic boulders from glacial drifts we directly date East Antarctic Ice Sheet variations. Erosion-corrected neon and beryllium exposure ages indicate that a major ice advance reaching elevations of about 500 m above present ice levels occurred between 1.125 and 1.375 million years before present. Subsequent ice fluctuations were of lesser extent but timing is difficult as all erratic boulders from related deposits show complex exposure histories. Sample-specific erosion rates were on the order of 20–45 cm Ma-1 for a quartzite and 10–65 cm Ma-1 for a sandstone boulder and imply that the modern cold, arid climate has persisted since at least the early Pleistocene.