Carolina V. Castilho

Long-term decline of the Amazon carbon sink

Atmospheric carbon dioxide records indicate that the land surface has acted as a strong global carbon sink over recent decades, with a substantial fraction of this sink probably located in the tropics, particularly in the Amazon. Nevertheless, it is unclear how the terrestrial carbon sink will evolve as climate and atmospheric composition continue to change. Here we analyse the historical evolution of the biomass dynamics of the Amazon rainforest over three decades using a distributed network of 321 plots. While this analysis confirms that Amazon forests have acted as a long-term net biomass sink, we find a long-term decreasing trend of carbon accumulation. Rates of net increase in above-ground biomass declined by one-third during the past decade compared to the 1990s. This is a consequence of growth rate increases levelling off recently, while biomass mortality persistently increased throughout, leading to a shortening of carbon residence times. Potential drivers for the mortality increase include greater climate variability, and feedbacks of faster growth on mortality, resulting in shortened tree longevity. The observed decline of the Amazon sink diverges markedly from the recent increase in terrestrial carbon uptake at the global scale, and is contrary to expectations based on models.

RAPELD: a modification of the Gentry method for biodiversity surveys in long-term ecological research sites

Our objectives were to develop a method that would be appropriate for long-term ecological studies, but that would permit rapid surveys to evaluate biotic complementarity and land-use planning in Amazonia. The Amazon basin covers about 7 million km2. Therefore, even a sparse coverage, with one sample site per 10.000 km2, would require about 700 sampling sites. Financial considerations limit the number of sites and investment at each site, but incomplete coverage makes evaluation of biotic complementarity difficult or impossible (Reddy & Davalos 2003). Our next challenge is to install similar systems throughout Amazonia. The cost, based on modification of Al Gentrys original design is moderate (less than US

Vertical distance from drainage drives floristic composition changes in an Amazonian rainforest

50.000 per site if it is not necessary to immediately identify all vascular plants in plots) and we can obtain RAP results for most taxa in the short term at much lower cost. However, biological surveys will only be relevant if the local people participate and the surveys serve as much to teach the local communities about the value of their natural resources as they serve to teach the international community about biodiversity. Therefore, we want to see each site run as a long-term ecological research project by local people and institutions. Biological surveys are an important tool in land-use planning, but only the local people can implement those plans.

Soil physical conditions limit palm and tree basal area in Amazonian forests

Background: Plant composition changes with topography and edaphic gradients that correlate with soil-water and nutrient availability. Data on soil water for the Amazon Basin are scarce, limiting the possibility of distinguishing between soil and soil-water influences on plant composition. Aim: We tested a new proxy for water table depth, the terrain height above nearest drainage (HAND), as a predictor of composition in trees, lianas, palms, shrubs, and herbs and compared HAND to conventional measures of height above sea level (HASL) and horizontal distances from nearest drainage (HDND). Methods: Plant-species composition in 72 plots distributed across 64 km2 of lowland evergreen terra firme forest was summarised using non-metric multidimensional scaling (NMDS). NMDS scores were regressed against estimates of HAND, HASL and HDND. Results: Plant composition was highly correlated with the vertical distance from water table, capturing up to 82% of variation. All life forms showed highest turnover rates in the zone with seasonally water-saturated soils, which can extend 350 m from stream margins. Conclusions: Floristic composition is closely related to water table depth, and HAND appears to be the most robust available topographical metric of soil-water gradients. Brazilian conservation laws protecting 30-m-wide riparian buffers are likely to be too narrow to encompass the full zone of highest floristic turnover and may be ineffective in safeguarding riparian plant diversity.

Soil-induced impacts on forest structure drive coarse woody debris stocks across central Amazonia

Background: Trees and arborescent palms adopt different rooting strategies and responses to physical limitations imposed by soil structure, depth and anoxia. However, the implications of these differences for understanding variation in the relative abundance of these groups have not been explored. Aims: We analysed the relationship between soil physical constraints and tree and palm basal area to understand how the physical properties of soil are directly or indirectly related to the structure and physiognomy of lowland Amazonian forests. Methods: We analysed inventory data from 74 forest plots across Amazonia, from the RAINFOR and PPBio networks for which basal area, stand turnover rates and soil data were available. We related patterns of basal area to environmental variables in ordinary least squares and quantile regression models. Results: Soil physical properties predicted the upper limit for basal area of both trees and palms. This relationship was direct for palms but mediated by forest turnover rates for trees. Soil physical constraints alone explained up to 24% of palm basal area and, together with rainfall, up to 18% of tree basal area. Tree basal area was greatest in forests with lower turnover rates on well-structured soils, while palm basal area was high in weakly structured soils. Conclusions: Our results show that palms and trees are associated with different soil physical conditions. We suggest that adaptations of these life-forms drive their responses to soil structure, and thus shape the overall forest physiognomy of Amazonian forest vegetation.

Low Phylogenetic Beta Diversity and Geographic Neo-endemism in Amazonian White-sand Forests

Background: Coarse woody debris (CWD) is an essential component in tropical forest ecosystems and its quantity varies widely with forest types. Aims: Relationships among CWD, soil, forest structure and other environmental factors were analysed to understand the drivers of variation in CWD in forests on different soil types across central Amazonia. Methods: To estimate CWD stocks and density of dead wood debris, 75 permanent forest plots of 0.5 ha in size were assessed along a transect that spanned ca. 700 km in undisturbed forests from north of the Rio Negro to south of the Rio Amazonas. Soil physical properties were evaluated by digging 2-m-deep pits and by taking auger samples. Results: Soil physical properties were the best predictors of CWD stocks; 37% of its variation was explained by effective soil depth. CWD stocks had a two-fold variation across a gradient of physical soil constraints (i.e. effective soil depth, anoxia and soil structure). Average biomass per tree was related to physical soil constraints, which, in turn, had a strong relationship with local CWD stocks. Conclusions: Soil physical properties appear to control average biomass per tree (and through this affect forest structure and dynamics), which, in turn, is correlated with CWD production and stocks.

Influence of soil, topography and substrates on differences in wood decomposition between one-hectare plots in lowland tropical moist forest in Central Amazonia.

Over the past three decades, many small-scale floristic studies of white-sand forests across the Amazon basin have been published. Nonetheless, a basin-wide description of both taxonomic and phylogenetic alpha and beta diversity at regional scales has never been achieved. We present a complete floristic analysis of white-sand forests across the Amazon basin including both taxonomic and phylogenetic diversity. We found strong regional differences in the signal of phylogenetic community structure with both overall and regional Net Relatedness Index and Nearest Taxon Index values found to be significantly positive leading to a pattern of phylogenetic clustering. Additionally, we found high taxonomic dissimilarity but low phylogenetic dissimilarity in pairwise community comparisons. These results suggest that recent diversification has played an important role in the assembly of white-sand forests causing geographic neo-endemism patterns at the regional scale.

Influences of forest structure and landscape features on spatial variation in species composition in a palm community in central Amazonia

Understandinghowwooddecompositionvariesspatiallyatthemesoscale(between1-haplots)mayimprove carbon flux estimates in Amazonian forests. An experiment was carried out to test the influence of soil, slope, above- ground tree live biomass (biomass), fine-litter mass and characteristics of neighbouring trees on the variation of wood decomposition between 1-ha plots in four species of tropical trees that vary in wood density (Manilkara huberi - 0.86gcm −3 ,Couratariguianensis-0.54gcm −3 ,Huracrepitans-0.32gcm −3 andParkiapendula-0.29gcm −3 ).Awood sample from each species (30 × 5 × 2.5 cm) was placed in each of 71 plots within 64 km 2 of terra firme tropical moist forestinReservaFlorestalAdolphoDucke.Oneyearlater,sampleswerecollectedandweighed.Theeffectsofspecificity of decomposers was measured by the association of decomposition with the wood density and with the taxonomic group of the nearest tree with dbh ≥30 cm. Wood decomposition was independent of soil (texture and nutrients), slope, biomass and fine-litter mass at the mesoscale, except for C. guianensis, which showed greater decomposition in locations with greater biomass. Decomposition was also independent of wood density and taxonomic group of nearby large trees. In general, none of the variables was useful as a predictor of wood decomposition at the scale larger than 1 ha. Thus, the use of models that include soil and topography to improve estimates of carbon flux are limited because wood decomposition does not follow similar mesoscale patterns to that of biomass and fine-litter decomposition. Also, the results indicate that wood decomposition is more likely to be associated with generalist decomposers than with specialists associated with neighbouring trees.

Can traits predict individual growth performance? A test in a hyperdiverse tropical forest

The mechanisms that maintain palm species diversity in tropical rain forests are still debated. Spatial variationinforeststructureproducessmall-scaleenvironmentalheterogeneity,whichinturncanaffectplantsurvival and reproductive performance. An understanding of how palms respond to variation in forest heterogeneity may help to explain the diversity and structure of their assemblages. We used multivariate ordination statistics and multiple linear models to analyse how palm assemblages are affected by forest structure and landscape features in central Amazonia.In72(250 ×4m)forestplotsdistributedoveranareaof64km 2 ,werecordedallseedlingandadultpalms, and measured topographic and soil variables, and components of forest structure and tree abundance. We found 16976 adults and 18935 seedlings of 46 palm species and five varieties including two morphological forms making a total of 50 botanical entities. Results show that landscape features (altitude, slope, proportions of soil sand and clay) andvariouscomponentsofforeststructure(suchasdegreeofforestopenness,abundanceofforesttrees,logsandsnags, and leaf litter mass), influence spatial variation in richness, abundance and species composition of palms, creating ecological gradients in palm community composition. Despite the statistically significant effects of environmental variables, most species occurred throughout the full range of the ecological gradients we studied, indicating that there is either relatively weak niche specialization in the palms, or that the competition between the species is mediated by diffuse demographic processes that cannot be evaluated only through studies of species distributions.

Multi-taxa Surveys: Integrating Ecosystem Processes and User Demands

Summary The functional trait approach has, as a central tenet, that plant traits are functional and shape individual performance, but this has rarely been tested in the field. Here, we tested the individual‐based trait approach in a hyperdiverse Amazonian tropical rainforest and evaluated intraspecific variation in trait values, plant strategies at the individual level, and whether traits are functional and predict individual performance. We evaluated > 1300 tree saplings belonging to > 383 species, measured 25 traits related to growth and defense, and evaluated the effects of environmental conditions, plant size, and traits on stem growth. A total of 44% of the trait variation was observed within species, indicating a strong potential for acclimation. Individuals showed two strategy spectra, related to tissue toughness and organ size vs leaf display. In this nutrient‐ and light‐limited forest, traits measured at the individual level were surprisingly poor predictors of individual growth performance because of convergence of traits and growth rates. Functional trait approaches based on individuals or species are conceptually fundamentally different: the species‐based approach focuses on the potential and the individual‐based approach on the realized traits and growth rates. Counterintuitively, the individual approach leads to a poor prediction of individual performance, although it provides a more realistic view on community dynamics.